##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727247.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4916216 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.89950644967593 31.0 30.0 33.0 25.0 34.0 2 30.25252633326119 31.0 30.0 34.0 26.0 34.0 3 31.072921328110887 31.0 30.0 34.0 28.0 34.0 4 35.069849453319385 35.0 35.0 37.0 32.0 37.0 5 34.91874848460686 35.0 35.0 37.0 32.0 37.0 6 34.97498787685488 35.0 35.0 37.0 32.0 37.0 7 34.83443078985952 35.0 35.0 37.0 32.0 37.0 8 34.834424077379836 35.0 35.0 37.0 32.0 37.0 9 36.24080288579672 38.0 35.0 39.0 32.0 39.0 10 36.01002457988014 37.0 35.0 39.0 30.0 39.0 11 36.09272924541965 37.0 35.0 39.0 31.0 39.0 12 35.882973001999915 37.0 35.0 39.0 30.0 39.0 13 35.909058715076796 37.0 35.0 39.0 30.0 39.0 14 36.67399337213825 38.0 35.0 40.0 30.0 41.0 15 36.69130567086556 38.0 36.0 40.0 30.0 41.0 16 36.47457821218596 38.0 35.0 40.0 30.0 41.0 17 36.99512124772386 38.0 36.0 40.0 31.0 41.0 18 37.18539034900012 39.0 36.0 40.0 31.0 41.0 19 37.3276015537153 39.0 36.0 40.0 32.0 41.0 20 37.37148082997167 39.0 36.0 41.0 32.0 41.0 21 37.32950179569002 39.0 36.0 41.0 31.0 41.0 22 37.29047787973514 39.0 36.0 41.0 31.0 41.0 23 37.17378569208513 39.0 36.0 40.0 31.0 41.0 24 37.07092894209693 39.0 36.0 40.0 31.0 41.0 25 36.96286534196219 39.0 36.0 40.0 31.0 41.0 26 36.67053705532873 39.0 36.0 40.0 30.0 41.0 27 36.501615470109535 39.0 35.0 40.0 30.0 41.0 28 36.32296038253811 39.0 35.0 40.0 30.0 41.0 29 36.115385491605736 38.0 35.0 40.0 29.0 41.0 30 35.96360879993882 38.0 35.0 40.0 29.0 41.0 31 35.759622441324794 38.0 34.0 40.0 27.0 41.0 32 35.57726206497029 38.0 34.0 40.0 27.0 41.0 33 35.4273184904813 38.0 34.0 40.0 27.0 41.0 34 35.279442359733586 38.0 34.0 40.0 26.0 41.0 35 35.09117764557131 38.0 34.0 40.0 25.0 41.0 36 34.93352895804416 38.0 33.0 40.0 25.0 41.0 37 34.77204317304203 38.0 33.0 40.0 25.0 41.0 38 34.65746541649106 38.0 33.0 40.0 24.0 41.0 39 34.52149620765239 38.0 33.0 40.0 24.0 41.0 40 34.38043243014546 38.0 33.0 40.0 23.0 41.0 41 34.215015776361334 38.0 33.0 40.0 23.0 41.0 42 34.006145580259286 37.0 33.0 40.0 21.0 41.0 43 33.633089555056166 37.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 6.0 12 7.0 13 22.0 14 43.0 15 91.0 16 183.0 17 374.0 18 853.0 19 1886.0 20 3809.0 21 7138.0 22 12667.0 23 20170.0 24 30064.0 25 43044.0 26 58462.0 27 77667.0 28 101120.0 29 129560.0 30 162911.0 31 203039.0 32 248240.0 33 302869.0 34 365931.0 35 438159.0 36 540354.0 37 673837.0 38 773841.0 39 719867.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.421084020718375 28.386629065932013 14.721668047132185 21.470618866217432 2 19.56750883199599 26.787451975259017 30.01249334854286 23.632545844202127 3 20.326730965441715 25.44739694106199 30.51175945076457 23.714112642731727 4 15.907824229041198 17.296412525405717 31.770044277956867 35.02571896759621 5 13.798274933404064 40.06746245486366 32.272910710188484 13.86135190154379 6 34.62756721836469 37.63372073155452 12.20603407173322 15.532677978347575 7 28.76214145188088 31.563971151796423 19.81483319691405 19.85905419940865 8 29.387337741059383 35.93721268552887 17.401961183153873 17.273488390257874 9 26.898187549123147 15.153117763743499 18.111734716293995 39.83695997083936 10 16.850297057737087 30.59121080115276 31.834117947624758 20.724374193485396 11 35.421368792583564 24.50982625661688 18.624954639910044 21.443850310889516 12 21.114186195236336 27.987684023647457 28.530418517005764 22.367711264110447 13 32.321199882185816 20.46734724430334 23.089282488808465 24.122170384702383 14 21.78779370149725 22.847145040006378 25.7807020684201 29.58435919007627 15 25.487834545919057 29.80845430713378 21.890087823643224 22.81362332330394 16 23.376413892310673 27.057029227356978 24.685327088964357 24.881229791367996 17 23.78719730784815 27.985263462793338 25.923820271525905 22.30371895783261 18 23.301783322783216 26.26029857109614 26.80801657209529 23.629901534025354 19 23.35615440818711 27.82465213082582 27.373593837211384 21.445599623775685 20 23.218975732555283 27.27378129846207 26.885169406714432 22.622073562268216 21 22.339844303016793 28.239666442646133 26.755659230595235 22.664830023741835 22 23.168428726483945 27.835981982890907 25.852708668618302 23.142880622006846 23 22.80514118989076 27.403555905598942 25.994484375788208 23.796818528722092 24 22.892830583521963 27.768979231181056 26.24660918071948 23.091581004577506 25 23.42041114548262 26.816274956185815 25.94340850768152 23.819905390650046 26 23.256748686388068 27.366962720921943 26.776447576754155 22.599841015935834 27 23.737016437032057 27.800141409571914 26.33712595215507 22.125716201240955 28 22.936624428218778 28.47425743702067 26.475423374400147 22.11369476036041 29 23.018557362003623 28.385530660166275 26.62132827361532 21.974583704214787 30 22.45885860181896 28.48412274806477 26.671610848668976 22.38540780144729 31 22.76205927485692 27.71119088339487 26.67106164578611 22.8556881959621 32 22.043722244913567 28.067643895223483 26.40856300862289 23.480070851240058 33 22.4151461205122 28.40770218395612 26.20165590771439 22.975495787817295 34 23.068494142649552 28.1287681420019 26.05745963969036 22.74527807565819 35 22.68948313092834 28.354612571945577 26.54834531273646 22.40755898438962 36 22.855830581894693 28.53214748904442 26.244656459358172 22.367365469702715 37 22.17546991425926 28.066565830305258 26.81373235024661 22.944231905188868 38 22.56973656161568 28.403979808861124 26.742132566998684 22.28415106252451 39 22.058713449531105 28.391307460860144 26.538500342539873 23.011478747068885 40 22.718895996433027 28.284843464973875 27.173155125812208 21.823105412780887 41 23.051184081415464 27.655456961207562 26.72618534254801 22.567173614828967 42 21.98711366628317 28.252826970987442 27.179501470236456 22.580557892492926 43 22.831360542335812 27.41390939698337 26.950483868080653 22.80424619260016 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3198.0 1 2833.0 2 2468.0 3 2398.5 4 2329.0 5 2329.0 6 2717.0 7 3105.0 8 4398.0 9 5691.0 10 8954.5 11 12218.0 12 12218.0 13 33693.5 14 55169.0 15 88934.0 16 122699.0 17 91533.5 18 60368.0 19 60368.0 20 68907.0 21 77446.0 22 63177.5 23 48909.0 24 53949.5 25 58990.0 26 58990.0 27 71069.0 28 83148.0 29 93855.5 30 104563.0 31 118839.5 32 133116.0 33 133116.0 34 144637.5 35 156159.0 36 174323.0 37 192487.0 38 212464.5 39 232442.0 40 232442.0 41 253124.0 42 273806.0 43 291052.0 44 308298.0 45 329454.0 46 350610.0 47 350610.0 48 377489.5 49 404369.0 50 419147.5 51 433926.0 52 434303.0 53 434680.0 54 434680.0 55 401783.0 56 368886.0 57 322440.0 58 275994.0 59 249342.0 60 222690.0 61 222690.0 62 193722.5 63 164755.0 64 139167.5 65 113580.0 66 94779.0 67 75978.0 68 75978.0 69 62441.5 70 48905.0 71 40504.5 72 32104.0 73 26202.0 74 20300.0 75 20300.0 76 16584.0 77 12868.0 78 10616.0 79 8364.0 80 6650.0 81 4936.0 82 4936.0 83 3902.0 84 2868.0 85 2294.5 86 1721.0 87 1375.5 88 1030.0 89 1030.0 90 770.5 91 511.0 92 400.5 93 290.0 94 217.5 95 145.0 96 145.0 97 99.0 98 53.0 99 48.5 100 44.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4916216.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.5659626572668 #Duplication Level Percentage of deduplicated Percentage of total 1 82.34271891969065 46.57795163509037 2 9.33539566612181 10.561312852813135 3 3.104275225619501 5.267889494708135 4 1.5511055506904015 3.5095911463132996 5 0.8459770105102907 2.392675199271565 6 0.5719774895844673 1.941267438997931 7 0.3993521029773409 1.5812815300882064 8 0.2925056777102133 1.3236692193915556 9 0.2310057454405102 1.1760356133181782 >10 1.2220732830286598 12.474425696204 >50 0.07035259298163027 2.699769359696907 >100 0.027337405261682778 2.773472030589641 >500 0.0031615332784596605 1.2263979690766376 >1k 0.002289384441919203 2.639173498981191 >5k 3.270549202737672E-4 1.3906377047687368 >10k+ 1.4535774234389654E-4 2.464449610690425 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 62470 1.2706927441756017 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23804 0.48419353421411915 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22396 0.4555536209149476 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11221 0.22824464995028695 No Hit GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG 8709 0.17714844099608315 No Hit GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG 8220 0.16720176656192487 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7997 0.16266575756638846 No Hit GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 7947 0.16164871519070764 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 7603 0.1546514636460237 No Hit TCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTG 7518 0.15292249160736632 No Hit TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG 6772 0.13774821936220866 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 6566 0.13355800477440372 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6320 0.12855415628605416 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 2.0340847513616163E-5 0.0 0.0 0.0 0.0 4 2.0340847513616163E-5 0.0 0.0 0.0 2.0340847513616163E-5 5 2.0340847513616163E-5 0.0 0.0 0.0 2.0340847513616163E-5 6 2.0340847513616163E-5 0.0 0.0 0.0 6.102254254084849E-5 7 2.0340847513616163E-5 0.0 0.0 0.0 6.102254254084849E-5 8 2.0340847513616163E-5 0.0 0.0 0.0 8.136339005446465E-5 9 2.0340847513616163E-5 0.0 0.0 0.0 2.4409017016339396E-4 10 2.0340847513616163E-5 0.0 0.0 6.102254254084849E-5 2.4409017016339396E-4 11 2.0340847513616163E-5 0.0 0.0 8.136339005446465E-5 2.4409017016339396E-4 12 2.0340847513616163E-5 0.0 0.0 8.136339005446465E-5 2.4409017016339396E-4 13 2.0340847513616163E-5 2.0340847513616163E-5 0.0 8.136339005446465E-5 2.644310176770101E-4 14 2.0340847513616163E-5 4.0681695027232326E-5 0.0 1.0170423756808082E-4 4.6783949281317173E-4 15 2.0340847513616163E-5 6.102254254084849E-5 0.0 1.627267801089293E-4 4.6783949281317173E-4 16 6.102254254084849E-5 6.102254254084849E-5 0.0 2.237493226497778E-4 5.898845778948687E-4 17 6.102254254084849E-5 6.102254254084849E-5 0.0 4.068169502723233E-4 5.898845778948687E-4 18 6.102254254084849E-5 6.102254254084849E-5 0.0 4.881803403267879E-4 6.712479679493333E-4 19 6.102254254084849E-5 6.102254254084849E-5 0.0 7.526113580037981E-4 7.119296629765657E-4 20 6.102254254084849E-5 6.102254254084849E-5 0.0 0.0012611325458442022 7.119296629765657E-4 21 6.102254254084849E-5 6.102254254084849E-5 0.0 0.0024205608541203235 7.526113580037981E-4 22 6.102254254084849E-5 6.102254254084849E-5 0.0 0.00376305679001899 7.526113580037981E-4 23 6.102254254084849E-5 6.102254254084849E-5 0.0 0.0047597583181861825 9.763606806535758E-4 24 6.102254254084849E-5 6.102254254084849E-5 0.0 0.006814183917061414 0.0010170423756808082 25 8.136339005446465E-5 8.136339005446465E-5 0.0 0.007973612225337537 0.0010577240707080405 26 8.136339005446465E-5 8.136339005446465E-5 0.0 0.00980428850156299 0.0010984057657352727 27 8.136339005446465E-5 8.136339005446465E-5 0.0 0.013669049529150061 0.0010984057657352727 28 8.136339005446465E-5 8.136339005446465E-5 0.0 0.02141891243183782 0.0010984057657352727 29 8.136339005446465E-5 8.136339005446465E-5 0.0 0.039827379431660447 0.0010984057657352727 30 8.136339005446465E-5 8.136339005446465E-5 0.0 0.06496866695849003 0.0010984057657352727 31 8.136339005446465E-5 8.136339005446465E-5 0.0 0.12857449713356778 0.0011390874607625052 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACGGG 635 0.0 18.64567 1 AAGTACG 1230 0.0 18.04878 1 TATACCG 325 0.0 16.507692 5 AATCAAC 1710 0.0 15.038012 1 TCTATAC 460 0.0 14.478261 3 GAGTACT 19000 0.0 14.429999 11 GTACTTT 19095 0.0 14.377585 13 AGTACTT 19345 0.0 14.182218 12 TACTTTT 19700 0.0 13.982996 14 CTATACT 585 0.0 13.914529 4 ACTTTTT 21155 0.0 13.231152 15 CTACACT 980 0.0 12.647959 4 CGTACAC 295 1.8189894E-12 12.542374 3 CTTTTTT 22435 0.0 12.501003 16 TAGACTG 610 0.0 12.434426 5 TATGCGC 165 3.810117E-6 12.333333 10 GTATACT 320 0.0 12.140626 4 TATACTG 565 0.0 12.115045 5 TACTCCG 375 0.0 11.839999 5 TACACTG 2195 0.0 11.715262 5 >>END_MODULE