##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727245.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6059378 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.439582742651144 31.0 31.0 34.0 30.0 34.0 2 31.63949385563997 31.0 31.0 34.0 30.0 34.0 3 31.74477182311452 31.0 31.0 34.0 30.0 34.0 4 35.48410826985872 37.0 35.0 37.0 33.0 37.0 5 35.301166885446 37.0 35.0 37.0 33.0 37.0 6 35.307612266473555 37.0 35.0 37.0 32.0 37.0 7 35.20591271909427 37.0 35.0 37.0 32.0 37.0 8 35.17485804648596 37.0 35.0 37.0 32.0 37.0 9 36.72906394022621 39.0 35.0 39.0 32.0 39.0 10 36.54285027275077 38.0 35.0 39.0 32.0 39.0 11 36.6169134851795 38.0 35.0 39.0 32.0 39.0 12 36.47180832752141 38.0 35.0 39.0 32.0 39.0 13 36.50895174389186 38.0 35.0 39.0 32.0 39.0 14 37.50785526171168 39.0 36.0 41.0 32.0 41.0 15 37.45839969052929 39.0 36.0 41.0 32.0 41.0 16 37.36893093647566 39.0 36.0 41.0 32.0 41.0 17 37.31076539539207 39.0 36.0 41.0 32.0 41.0 18 37.22667986714148 39.0 36.0 40.0 31.0 41.0 19 37.21949629153355 39.0 36.0 40.0 31.0 41.0 20 37.09660793566601 39.0 36.0 40.0 31.0 41.0 21 36.99798609692282 39.0 36.0 40.0 31.0 41.0 22 37.30387046327197 39.0 36.0 41.0 31.0 41.0 23 37.326313690943195 39.0 36.0 41.0 31.0 41.0 24 37.317700760705144 39.0 36.0 41.0 31.0 41.0 25 37.28185797288104 39.0 36.0 41.0 31.0 41.0 26 37.12609281018613 39.0 36.0 41.0 31.0 41.0 27 37.01445808464169 39.0 36.0 41.0 31.0 41.0 28 36.876762928472196 39.0 36.0 41.0 30.0 41.0 29 36.76874573594848 39.0 36.0 41.0 30.0 41.0 30 36.649626083733345 39.0 35.0 40.0 30.0 41.0 31 36.527769021836896 39.0 35.0 40.0 30.0 41.0 32 36.3951785150225 39.0 35.0 40.0 30.0 41.0 33 36.272339009053404 38.0 35.0 40.0 30.0 41.0 34 36.15827218569299 38.0 35.0 40.0 29.0 41.0 35 36.02218792093842 38.0 35.0 40.0 29.0 41.0 36 35.88046396841392 38.0 35.0 40.0 27.0 41.0 37 35.78194114973517 38.0 34.0 40.0 27.0 41.0 38 35.63419248642352 38.0 34.0 40.0 27.0 41.0 39 35.523957079423006 38.0 34.0 40.0 26.0 41.0 40 35.38829348490885 38.0 34.0 40.0 26.0 41.0 41 35.260960118348784 38.0 34.0 40.0 26.0 41.0 42 35.1157861417459 38.0 33.0 40.0 25.0 41.0 43 34.972938311490054 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 5.0 13 8.0 14 17.0 15 34.0 16 83.0 17 241.0 18 490.0 19 1180.0 20 2560.0 21 4923.0 22 8978.0 23 15464.0 24 24601.0 25 36860.0 26 53051.0 27 73664.0 28 100366.0 29 131601.0 30 168891.0 31 211578.0 32 259660.0 33 316124.0 34 388562.0 35 475263.0 36 596618.0 37 777413.0 38 1106320.0 39 1304821.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.554459550138645 19.784373907684913 13.428721561850077 26.232444980326363 2 19.73908873154967 22.326086934995637 32.43605201722025 25.498772316234437 3 20.396532449370216 22.770951077816896 30.319910723509906 26.51260574930298 4 16.200540715565197 16.217390629863328 32.53398286094711 35.04808579362436 5 15.14001932211524 36.76846039312946 33.0597463964123 15.031773888342995 6 35.70683327562664 34.6434072936199 14.063918771860742 15.58584065889271 7 29.55035978940413 30.94905120624592 19.91555898971809 19.585030014631865 8 28.035220776786 34.44353529355653 18.706870573184244 18.814373356473222 9 27.235155159489967 14.454206355833882 18.555831968231722 39.75480651644443 10 17.093074569700057 27.86122602022848 32.2691867053021 22.776512704769367 11 36.236376076884454 22.183448532176076 20.337929074568383 21.242246316371087 12 21.59289286788182 25.327022014470792 28.929025388414452 24.151059729232934 13 31.273787507562655 19.98969201129225 23.549232280937087 25.18728820020801 14 22.42020550624173 21.05221030937499 24.962248600433906 31.565335583949377 15 25.623686127520017 28.138944294282354 21.874307891007955 24.363061687189674 16 24.438630499698156 26.391405190433737 24.31540002950798 24.85456428036013 17 24.19556924819676 26.336085981102354 25.184829201941188 24.283515568759697 18 24.21055428461469 25.72874641588625 25.874586467455902 24.186112832043158 19 25.256800285441837 25.367059127190945 26.26820772693171 23.10793286043551 20 24.431055464768825 25.199170607940285 26.21407675837355 24.155697168917335 21 24.164179887770658 25.516711451241363 26.63745354721227 23.681655113775705 22 24.72705944405515 25.093912279445185 25.619131204555977 24.559897071943688 23 24.17822423357645 25.294724970120697 26.03128571942533 24.495765076877525 24 24.056693607825753 25.251898792252277 26.12551981407993 24.565887785842044 25 24.57179598302004 25.020290861537276 25.86151581895039 24.546397336492294 26 24.339907495455805 25.37760476405334 26.13278128547187 24.14970645501898 27 24.68614765409915 25.792267787221725 25.668674243461954 23.852910315217173 28 24.076134547143287 26.11061729438236 25.46862070661378 24.34462745186057 29 24.108992705191852 26.16664614750887 26.124958700381455 23.599402446917818 30 24.781751526311776 25.612595880303225 25.67019255111663 23.935460042268364 31 24.468996652791756 25.332616648111404 26.1524697749505 24.04591692414634 32 24.012992752721484 25.76143954049409 25.862473012906605 24.36309469387782 33 24.084204682394795 25.270052470732146 25.80426571836251 24.84147712851055 34 24.501508240614797 25.623735637552237 26.083023703092955 23.791732418740008 35 24.455975514318467 25.671067228352477 25.75528379315501 24.117673464174043 36 24.266599641085275 25.604014141385466 26.00153019006241 24.127856027466844 37 24.0555218703966 25.72062677060253 26.316859585257763 23.906991773743115 38 24.32413029852239 25.43181824933186 26.050050021635883 24.194001430509864 39 23.713737614652857 25.945616860344412 26.447434043560246 23.893211481442485 40 24.693194582018155 25.311376844289956 26.293573366771312 23.701855206920577 41 24.03132796798615 25.615038375225975 26.10061626787436 24.253017388913513 42 24.049762203315257 25.718283295744214 26.01701032680252 24.214944174138004 43 23.944124297906484 25.31992557651957 25.966081006994447 24.7698691185795 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1882.0 1 1694.5 2 1507.0 3 1734.5 4 1962.0 5 1962.0 6 2934.0 7 3906.0 8 3780.5 9 3655.0 10 5613.0 11 7571.0 12 7571.0 13 18456.5 14 29342.0 15 41656.0 16 53970.0 17 44227.5 18 34485.0 19 34485.0 20 43048.0 21 51611.0 22 43478.0 23 35345.0 24 42751.0 25 50157.0 26 50157.0 27 61704.0 28 73251.0 29 84783.0 30 96315.0 31 111915.5 32 127516.0 33 127516.0 34 146703.5 35 165891.0 36 192726.0 37 219561.0 38 247561.5 39 275562.0 40 275562.0 41 305672.0 42 335782.0 43 365727.5 44 395673.0 45 427518.5 46 459364.0 47 459364.0 48 492483.5 49 525603.0 50 546483.5 51 567364.0 52 561402.0 53 555440.0 54 555440.0 55 521393.5 56 487347.0 57 451141.0 58 414935.0 59 380207.0 60 345479.0 61 345479.0 62 300762.5 63 256046.0 64 215699.5 65 175353.0 66 145262.0 67 115171.0 68 115171.0 69 94370.0 70 73569.0 71 59880.5 72 46192.0 73 37991.0 74 29790.0 75 29790.0 76 23981.5 77 18173.0 78 14620.0 79 11067.0 80 8702.0 81 6337.0 82 6337.0 83 4845.0 84 3353.0 85 2651.5 86 1950.0 87 1509.0 88 1068.0 89 1068.0 90 769.0 91 470.0 92 341.0 93 212.0 94 163.0 95 114.0 96 114.0 97 68.0 98 22.0 99 18.5 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 6059378.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.15861070479377 #Duplication Level Percentage of deduplicated Percentage of total 1 75.76686501120533 35.73060091386092 2 11.671544727099983 11.00827668217793 3 4.314228335080121 6.1035904363690205 4 2.192696028955892 4.136179936939126 5 1.2975565255365005 3.059548152762032 6 0.8563567986152383 2.42307581341797 7 0.6010889589402937 1.9842564149530555 8 0.45787082144396857 1.7274041457248206 9 0.3677202731891167 1.5607059490427373 >10 2.251116930153736 19.819049838266253 >50 0.1616820025397629 5.166912301791673 >100 0.058290342751447705 4.635770996721203 >500 0.0020005359126605755 0.6503493536780537 >1k 8.42321636700582E-4 0.7001460096101573 >5k 0.0 0.0 >10k+ 1.40386939397248E-4 1.294133054685057 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29181 0.48158408338281583 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23401 0.38619475464313335 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12965 0.2139658559013813 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12643 0.20865177911000105 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.650334407260943E-5 8.251672036304716E-5 2 0.0 0.0 0.0 1.650334407260943E-5 8.251672036304716E-5 3 1.650334407260943E-5 0.0 0.0 1.650334407260943E-5 8.251672036304716E-5 4 3.300668814521886E-5 0.0 0.0 8.251672036304716E-5 1.6503344072609432E-4 5 3.300668814521886E-5 0.0 0.0 1.3202675258087545E-4 1.6503344072609432E-4 6 3.300668814521886E-5 0.0 0.0 1.3202675258087545E-4 2.475501610891415E-4 7 3.300668814521886E-5 0.0 0.0 1.485300966534849E-4 2.640535051617509E-4 8 3.300668814521886E-5 0.0 0.0 1.8153678479870377E-4 3.3006688145218864E-4 9 4.95100322178283E-5 0.0 0.0 1.980401288713132E-4 4.1258360181523583E-4 10 8.251672036304716E-5 0.0 0.0 2.475501610891415E-4 4.1258360181523583E-4 11 8.251672036304716E-5 0.0 0.0 2.475501610891415E-4 4.290869458878452E-4 12 8.251672036304716E-5 0.0 0.0 2.475501610891415E-4 4.290869458878452E-4 13 8.251672036304716E-5 0.0 0.0 2.475501610891415E-4 4.290869458878452E-4 14 8.251672036304716E-5 0.0 0.0 2.640535051617509E-4 6.436304188317678E-4 15 8.251672036304716E-5 1.650334407260943E-5 0.0 2.640535051617509E-4 6.766371069769867E-4 16 8.251672036304716E-5 1.650334407260943E-5 0.0 2.640535051617509E-4 8.086638595578622E-4 17 8.251672036304716E-5 1.650334407260943E-5 0.0 2.640535051617509E-4 8.086638595578622E-4 18 8.251672036304716E-5 1.650334407260943E-5 0.0 2.640535051617509E-4 9.571939562113471E-4 19 9.90200644356566E-5 3.300668814521886E-5 0.0 2.640535051617509E-4 9.571939562113471E-4 20 1.1552340850826603E-4 3.300668814521886E-5 0.0 2.640535051617509E-4 9.571939562113471E-4 21 1.1552340850826603E-4 3.300668814521886E-5 0.0 2.970601933069698E-4 9.90200644356566E-4 22 1.1552340850826603E-4 3.300668814521886E-5 0.0 4.1258360181523583E-4 0.001023207332501785 23 1.1552340850826603E-4 3.300668814521886E-5 0.0 4.620936340330641E-4 0.0014357909343170206 24 1.1552340850826603E-4 3.300668814521886E-5 0.0 6.766371069769867E-4 0.0014687976224622395 25 1.1552340850826603E-4 3.300668814521886E-5 0.0 7.591538273400339E-4 0.001485300966534849 26 1.1552340850826603E-4 3.300668814521886E-5 0.0 0.0011717374291552697 0.0015183076546800677 27 1.3202675258087545E-4 3.300668814521886E-5 0.0 0.003284165470449277 0.0015348109987526773 28 1.3202675258087545E-4 3.300668814521886E-5 0.0 0.008086638595578621 0.0015348109987526773 29 1.3202675258087545E-4 3.300668814521886E-5 0.0 0.016998444394787714 0.0015513143428252866 30 1.3202675258087545E-4 3.300668814521886E-5 0.0 0.027247021063878173 0.0015513143428252866 31 1.3202675258087545E-4 3.300668814521886E-5 0.0 0.05355335151561761 0.0015513143428252866 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGAGAC 970 0.0 18.5 22 CGAGACT 1005 0.0 17.487562 23 CACGAGA 1110 0.0 15.5 21 TATACAC 1400 0.0 14.799999 3 CCCACGA 1205 0.0 14.585062 19 ATCTCCG 1250 0.0 14.208 10 GTATACG 225 2.7284841E-11 13.9777775 1 GGTATCA 12780 0.0 13.33216 1 CCACGAG 1320 0.0 13.174242 20 CTTATAC 1540 0.0 12.974026 1 TTATACA 1615 0.0 12.486068 2 GCCCACG 1485 0.0 12.333333 18 TCGTTAC 1490 0.0 12.043625 23 TACGGAT 2500 0.0 11.988 27 GTTACGG 1915 0.0 11.979112 25 TACACAT 1950 0.0 11.858974 5 TCTACAC 1255 0.0 11.7928295 3 AACGCAG 18060 0.0 11.769934 5 ACGGATG 2590 0.0 11.642858 28 TCTCCGA 1600 0.0 11.562499 11 >>END_MODULE