##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727244.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6279624 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.439639379682607 31.0 31.0 34.0 30.0 34.0 2 31.633369450145423 31.0 31.0 34.0 30.0 34.0 3 31.740689251458367 31.0 31.0 34.0 30.0 34.0 4 35.48139617913429 37.0 35.0 37.0 33.0 37.0 5 35.297997618965724 37.0 35.0 37.0 33.0 37.0 6 35.31070315674951 37.0 35.0 37.0 32.0 37.0 7 35.20142750585067 37.0 35.0 37.0 32.0 37.0 8 35.162732195430806 37.0 35.0 37.0 32.0 37.0 9 36.71658876391325 39.0 35.0 39.0 32.0 39.0 10 36.538415835088216 38.0 35.0 39.0 32.0 39.0 11 36.61108435791697 38.0 35.0 39.0 32.0 39.0 12 36.463858823394524 38.0 35.0 39.0 32.0 39.0 13 36.49056758812311 38.0 35.0 39.0 32.0 39.0 14 37.47432489588549 39.0 36.0 41.0 32.0 41.0 15 37.42967540731738 39.0 36.0 41.0 32.0 41.0 16 37.339054058013666 39.0 36.0 41.0 32.0 41.0 17 37.28760368455181 39.0 36.0 41.0 32.0 41.0 18 37.21452207966592 39.0 36.0 40.0 31.0 41.0 19 37.20702417851769 39.0 36.0 40.0 31.0 41.0 20 37.094401511937654 39.0 36.0 40.0 31.0 41.0 21 36.99462133401617 39.0 36.0 40.0 31.0 41.0 22 37.302979127412726 39.0 36.0 41.0 31.0 41.0 23 37.32343990659314 39.0 36.0 41.0 31.0 41.0 24 37.31338834936614 39.0 36.0 41.0 31.0 41.0 25 37.27640779129451 39.0 36.0 41.0 31.0 41.0 26 37.11531773239926 39.0 36.0 41.0 31.0 41.0 27 36.998215657497965 39.0 36.0 41.0 30.0 41.0 28 36.859455279488074 39.0 36.0 41.0 30.0 41.0 29 36.748215179762354 39.0 36.0 40.0 30.0 41.0 30 36.61899231546347 39.0 35.0 40.0 30.0 41.0 31 36.4991679438132 39.0 35.0 40.0 30.0 41.0 32 36.370995142384324 38.0 35.0 40.0 30.0 41.0 33 36.25042805110625 38.0 35.0 40.0 30.0 41.0 34 36.136041903145795 38.0 35.0 40.0 29.0 41.0 35 35.99373959332597 38.0 35.0 40.0 28.0 41.0 36 35.850899353209684 38.0 35.0 40.0 27.0 41.0 37 35.741106633136 38.0 34.0 40.0 27.0 41.0 38 35.59101723287891 38.0 34.0 40.0 27.0 41.0 39 35.4740584786605 38.0 34.0 40.0 26.0 41.0 40 35.32777153536581 38.0 34.0 40.0 26.0 41.0 41 35.189550839349614 38.0 33.0 40.0 25.0 41.0 42 35.02656528480049 38.0 33.0 40.0 25.0 41.0 43 34.875634114399205 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 6.0 13 8.0 14 21.0 15 27.0 16 110.0 17 227.0 18 550.0 19 1201.0 20 2616.0 21 5178.0 22 9452.0 23 15983.0 24 25915.0 25 38193.0 26 55483.0 27 77813.0 28 104830.0 29 137593.0 30 176669.0 31 220849.0 32 271232.0 33 329861.0 34 404392.0 35 495038.0 36 619470.0 37 813247.0 38 1141741.0 39 1331917.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.52643534071467 19.124250114338057 13.265077654330895 26.08423689061638 2 19.76678858479425 22.51443717012356 31.815296584636275 25.903477660445912 3 20.885852401353965 22.512446605083362 29.821259999006312 26.780440994556358 4 16.289669572573136 15.768364475325274 31.762761592095323 36.17920436000627 5 15.544465719603595 36.7687619513525 32.39394587956221 15.292826449481689 6 36.62803696527053 33.83872983477992 13.47327483301548 16.059958366934072 7 30.25498023448538 30.392870655950098 19.387785001140195 19.964364108424327 8 28.961351826160293 33.97053708948179 18.153857619500783 18.91425346485713 9 27.344153089420644 14.356369107449746 18.06633645581328 40.233141347316334 10 17.48418376641659 27.898740434140645 31.622578039704287 22.99449775973848 11 36.6438659384702 21.982446719739908 19.496915738904114 21.87677160288578 12 22.074490447198748 25.211286535626975 28.445731782667245 24.268491234507035 13 32.08626822242861 19.40476053980302 23.119489319742712 25.389481918025663 14 22.818754753469317 20.71337392175073 24.825244313990773 31.64262701078918 15 26.180580238562058 27.701085287908956 21.63549919549323 24.482835278035754 16 24.815976243163604 25.735665065296903 24.041534970883607 25.406823720655886 17 24.68434415818527 25.950853108402665 25.069590153805386 24.295212579606677 18 24.701080829043267 25.03110058818808 25.649354165153838 24.618464417614813 19 25.574715938406506 25.151633282502267 25.965838082025293 23.307812697065938 20 24.825562804397205 25.00644943073025 25.83154660215325 24.336441162719296 21 24.338352105157888 25.452335999735016 26.07058957670077 24.138722318406323 22 24.934709466681447 24.993789437074575 25.1734817243835 24.89801937186048 23 24.49442832882988 25.044795675664655 25.45087094386543 25.009905051640036 24 24.37521736970239 25.104862966317725 25.63994277364377 24.87997689033611 25 24.961351189179478 24.712928672162537 25.375006529053334 24.95071360960465 26 24.640089916211544 25.231239959589935 25.73713012116649 24.391540003032027 27 24.986703025531465 25.55047881847703 25.451635320840865 24.011182835150642 28 24.434711377623884 26.07726195071552 25.208818234977127 24.27920843668347 29 24.442689562305002 26.054187320769522 25.68502509067422 23.818098026251253 30 24.772136038718244 25.68655384462509 25.447272002272747 24.094038114383917 31 24.580659606371334 25.306706261393998 25.778900137970044 24.333733994264627 32 24.111953199745717 25.754455999276388 25.449039624028448 24.684551176949448 33 24.170332491244697 25.45515463983194 25.400883874575932 24.973628994347433 34 24.665298431880636 25.695614896688078 25.43923011951034 24.19985655192094 35 24.489189161644074 25.870720922144386 25.332137720347585 24.307952195863955 36 24.457276422919588 25.85933489011444 25.43515344230801 24.24823524465796 37 24.12588715502712 25.91803267201985 25.691984106054754 24.264096066898272 38 24.441479298760562 25.791162018617676 25.536688183878525 24.230670498743237 39 23.82383085356703 26.243131754385296 25.80912487754044 24.123912514507236 40 24.768839663011672 25.736954951442954 25.74550641885565 23.748698966689723 41 24.3400560288323 25.866628320421732 25.533726223098707 24.25958942764726 42 24.143181184096374 25.95894276472604 25.589653138468165 24.308222912709425 43 24.37214393728032 25.557820022345286 25.394561840008258 24.67547420036614 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 583.0 1 822.0 2 1061.0 3 1413.0 4 1765.0 5 1765.0 6 2929.0 7 4093.0 8 4009.0 9 3925.0 10 5784.5 11 7644.0 12 7644.0 13 20663.5 14 33683.0 15 51206.0 16 68729.0 17 51917.0 18 35105.0 19 35105.0 20 43815.0 21 52525.0 22 41717.5 23 30910.0 24 37448.0 25 43986.0 26 43986.0 27 55098.5 28 66211.0 29 77962.5 30 89714.0 31 103907.5 32 118101.0 33 118101.0 34 134782.0 35 151463.0 36 177219.5 37 202976.0 38 233268.5 39 263561.0 40 263561.0 41 296035.0 42 328509.0 43 361616.0 44 394723.0 45 430840.5 46 466958.0 47 466958.0 48 504316.5 49 541675.0 50 563678.0 51 585681.0 52 587990.5 53 590300.0 54 590300.0 55 561655.0 56 533010.0 57 488437.5 58 443865.0 59 408530.0 60 373195.0 61 373195.0 62 328428.0 63 283661.0 64 241208.5 65 198756.0 66 165683.0 67 132610.0 68 132610.0 69 109515.5 70 86421.0 71 70890.0 72 55359.0 73 45682.5 74 36006.0 75 36006.0 76 29084.5 77 22163.0 78 18027.5 79 13892.0 80 10912.0 81 7932.0 82 7932.0 83 6126.0 84 4320.0 85 3323.0 86 2326.0 87 1788.5 88 1251.0 89 1251.0 90 914.5 91 578.0 92 409.5 93 241.0 94 175.0 95 109.0 96 109.0 97 71.0 98 33.0 99 24.0 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 6279624.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.5724604457219 #Duplication Level Percentage of deduplicated Percentage of total 1 76.06601053222589 36.947132878404084 2 11.821325582187184 11.48381738513575 3 4.251777958681575 6.195579501661591 4 2.1847672876755677 4.244780906549146 5 1.2814557447231043 3.112172923675305 6 0.8191612017509324 2.3873205042430317 7 0.5654741632164764 1.9226529998136996 8 0.4555570811906295 1.77020226455203 9 0.3355962885251289 1.4670663705106108 >10 2.0384876468478126 18.333666248655003 >50 0.1295593676356853 4.256258108615947 >100 0.04650574007766393 3.9398539399767416 >500 0.0024553660492120893 0.8072653055463879 >1k 0.0017023515630622088 1.576467158669644 >5k 3.273753002636743E-5 0.08750553529776899 >10k+ 1.3095012010546972E-4 1.4682579686933488 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 40125 0.6389713779041547 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23478 0.3738758881104983 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16623 0.26471330130593806 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12109 0.19283001657424073 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.777356096479662E-5 2 1.5924520321598872E-5 0.0 0.0 0.0 4.777356096479662E-5 3 1.5924520321598872E-5 0.0 0.0 0.0 4.777356096479662E-5 4 1.5924520321598872E-5 0.0 0.0 1.5924520321598872E-5 4.777356096479662E-5 5 3.1849040643197744E-5 0.0 0.0 1.114716422511921E-4 4.777356096479662E-5 6 3.1849040643197744E-5 0.0 0.0 1.114716422511921E-4 7.962260160799437E-5 7 3.1849040643197744E-5 0.0 0.0 1.4332068289438986E-4 9.554712192959324E-5 8 4.777356096479662E-5 1.5924520321598872E-5 0.0 1.4332068289438986E-4 1.114716422511921E-4 9 4.777356096479662E-5 1.5924520321598872E-5 0.0 1.751697235375876E-4 1.751697235375876E-4 10 4.777356096479662E-5 1.5924520321598872E-5 0.0 1.9109424385918648E-4 1.751697235375876E-4 11 4.777356096479662E-5 1.5924520321598872E-5 0.0 1.9109424385918648E-4 1.751697235375876E-4 12 4.777356096479662E-5 1.5924520321598872E-5 0.0 1.9109424385918648E-4 1.751697235375876E-4 13 6.369808128639549E-5 1.5924520321598872E-5 0.0 1.9109424385918648E-4 1.9109424385918648E-4 14 6.369808128639549E-5 1.5924520321598872E-5 0.0 2.388678048239831E-4 3.8218848771837295E-4 15 6.369808128639549E-5 1.5924520321598872E-5 0.0 2.5479232514558195E-4 4.2996204868316957E-4 16 6.369808128639549E-5 1.5924520321598872E-5 0.0 2.7071684546718086E-4 4.936601299695651E-4 17 6.369808128639549E-5 1.5924520321598872E-5 0.0 2.7071684546718086E-4 5.095846502911639E-4 18 6.369808128639549E-5 1.5924520321598872E-5 0.0 2.7071684546718086E-4 5.573582112559605E-4 19 9.554712192959324E-5 1.5924520321598872E-5 0.0 3.0256588611037857E-4 5.732827315775594E-4 20 9.554712192959324E-5 1.5924520321598872E-5 0.0 3.3441492675357633E-4 5.892072518991583E-4 21 9.554712192959324E-5 1.5924520321598872E-5 0.0 5.255091706127628E-4 6.051317722207571E-4 22 9.554712192959324E-5 1.5924520321598872E-5 0.0 8.439995770447402E-4 6.529053331855538E-4 23 9.554712192959324E-5 1.5924520321598872E-5 1.5924520321598872E-5 0.001003244780260729 8.439995770447402E-4 24 9.554712192959324E-5 1.5924520321598872E-5 1.5924520321598872E-5 0.001385433267979102 8.599240973663391E-4 25 9.554712192959324E-5 1.5924520321598872E-5 1.5924520321598872E-5 0.001751697235375876 8.75848617687938E-4 26 9.554712192959324E-5 1.5924520321598872E-5 1.5924520321598872E-5 0.002245357365345441 9.236221786527347E-4 27 1.114716422511921E-4 1.5924520321598872E-5 1.5924520321598872E-5 0.003487469950430153 9.236221786527347E-4 28 1.2739616257279097E-4 1.5924520321598872E-5 1.5924520321598872E-5 0.006799770177322718 9.554712192959324E-4 29 1.2739616257279097E-4 1.5924520321598872E-5 1.5924520321598872E-5 0.014156898565901398 9.554712192959324E-4 30 1.2739616257279097E-4 1.5924520321598872E-5 1.5924520321598872E-5 0.02469893101879985 9.554712192959324E-4 31 1.5924520321598874E-4 1.5924520321598872E-5 1.5924520321598872E-5 0.048681258623127756 9.713957396175313E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACC 465 0.0 13.129032 4 TAATCCC 1380 0.0 11.93116 5 GTATTAG 580 0.0 11.801724 1 TCGTTAC 1165 0.0 11.751073 23 TATACTG 875 0.0 11.6285715 5 GTACTAG 375 0.0 11.346666 1 TAAGACT 870 0.0 11.05747 4 TTAATCC 1700 0.0 10.991177 4 AACGCAG 26845 0.0 10.812628 5 TAGTACT 515 0.0 10.776699 4 GAGTACT 14800 0.0 10.7375 11 TAGACTG 730 0.0 10.643836 5 TTTAATC 1975 0.0 10.58481 3 CCTATAC 665 0.0 10.571428 3 AGTACTT 15115 0.0 10.550447 12 GTACTTT 15165 0.0 10.491263 13 CTCGTTA 1255 0.0 10.466135 22 CTAGTAC 445 0.0 10.393259 3 TAATACT 715 0.0 10.349649 4 CCCTATA 470 0.0 10.234042 2 >>END_MODULE