##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727243.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5020595 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.177882900333525 31.0 31.0 33.0 30.0 34.0 2 31.396236501848886 31.0 31.0 34.0 30.0 34.0 3 31.4862172710605 31.0 31.0 34.0 30.0 34.0 4 35.26374304240832 37.0 35.0 37.0 33.0 37.0 5 35.053659974564766 35.0 35.0 37.0 32.0 37.0 6 35.09202355497705 36.0 35.0 37.0 32.0 37.0 7 35.00311875385288 36.0 35.0 37.0 32.0 37.0 8 34.96661471399306 36.0 35.0 37.0 32.0 37.0 9 36.503954610957464 38.0 35.0 39.0 32.0 39.0 10 36.26922625704722 38.0 35.0 39.0 32.0 39.0 11 36.36435044053543 38.0 35.0 39.0 32.0 39.0 12 36.19313826349267 38.0 35.0 39.0 32.0 39.0 13 36.24148731375465 38.0 35.0 39.0 32.0 39.0 14 37.19374337105462 39.0 36.0 40.0 31.0 41.0 15 37.12856364634072 39.0 36.0 40.0 31.0 41.0 16 37.0261269829572 39.0 36.0 40.0 31.0 41.0 17 36.9465415951695 38.0 36.0 40.0 31.0 41.0 18 36.84519543998271 38.0 36.0 40.0 31.0 41.0 19 36.82528385579797 39.0 36.0 40.0 31.0 41.0 20 36.692741597360474 38.0 35.0 40.0 30.0 41.0 21 36.573390803281285 38.0 35.0 40.0 30.0 41.0 22 36.90010407133019 39.0 36.0 40.0 31.0 41.0 23 36.9183965247147 39.0 36.0 40.0 31.0 41.0 24 36.900398657927994 39.0 36.0 40.0 30.0 41.0 25 36.86272802327214 39.0 36.0 40.0 30.0 41.0 26 36.6875922076965 39.0 36.0 40.0 30.0 41.0 27 36.567927904959475 39.0 35.0 40.0 30.0 41.0 28 36.4165787122841 39.0 35.0 40.0 30.0 41.0 29 36.305718744491436 38.0 35.0 40.0 30.0 41.0 30 36.18476734331289 38.0 35.0 40.0 29.0 41.0 31 36.065168769837044 38.0 35.0 40.0 29.0 41.0 32 35.93341307155825 38.0 35.0 40.0 28.0 41.0 33 35.80239871967366 38.0 34.0 40.0 27.0 41.0 34 35.68461447298577 38.0 34.0 40.0 27.0 41.0 35 35.54695409607825 38.0 34.0 40.0 27.0 41.0 36 35.39980599908975 38.0 34.0 40.0 26.0 41.0 37 35.29909343414476 38.0 34.0 40.0 26.0 41.0 38 35.15366764297857 38.0 33.0 40.0 25.0 41.0 39 35.03684324268339 38.0 33.0 40.0 25.0 41.0 40 34.90689290811149 38.0 33.0 40.0 25.0 41.0 41 34.78211925080593 38.0 33.0 40.0 24.0 41.0 42 34.65172414823343 38.0 33.0 40.0 24.0 41.0 43 34.5217827767426 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 2.0 13 5.0 14 19.0 15 35.0 16 107.0 17 264.0 18 598.0 19 1292.0 20 2873.0 21 5510.0 22 9845.0 23 16356.0 24 25277.0 25 37570.0 26 53607.0 27 72730.0 28 96919.0 29 125372.0 30 158537.0 31 194710.0 32 235602.0 33 284282.0 34 344339.0 35 418876.0 36 519336.0 37 669683.0 38 960129.0 39 786717.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.24130506443957 21.09737989222393 13.969579302851553 25.691735740484944 2 21.061647075695213 22.975244965985105 31.236835474679793 24.72627248363989 3 21.38437774805576 23.50822960226826 29.528452304955888 25.578940344720095 4 17.60934709929799 16.81280804366813 32.01461181393839 33.563233043095494 5 15.41673845430671 36.89763862649746 32.850568508314254 14.835054410881579 6 36.0560252320691 35.05937045310367 13.792528574800397 15.09207574002683 7 29.857397380190992 30.944400016332725 19.75909229882116 19.439110304655124 8 27.983954093090556 34.65093280776482 18.591561358763254 18.773551740381368 9 27.341898719175717 14.29786708547493 18.242897505176177 40.117336690173175 10 16.971275316969404 27.862215534214567 32.53761755329796 22.62889159551806 11 36.92584245492815 21.906287999729116 20.00027885141104 21.167590693931697 12 21.606861338148168 25.095690849391357 28.9653915521965 24.332056260263972 13 31.314276495116616 20.08068764757962 23.229597288767568 25.3754385685362 14 22.635125916350553 20.770287187076434 24.479469066913385 32.11511782965963 15 25.881275028159013 28.095116216305037 21.43136421081565 24.592244544720295 16 24.91597111497741 26.555497904132874 23.80116300956361 24.72736797132611 17 24.511815830593783 26.30016960141178 24.747026995804283 24.44098757219015 18 24.47490785454712 25.87651463621344 25.424755432374052 24.223822076865392 19 25.51723451104899 25.474331229665008 25.588062769452623 23.42037148983338 20 24.964351834792488 25.08808218946161 25.486720199498265 24.460845776247638 21 24.71507859128251 25.429794675730665 25.77879713460257 24.076329598384255 22 25.096308306087227 25.0043470943185 24.983751925817558 24.91559267377671 23 24.690300651615992 25.292520109668278 25.271148140808013 24.746031097907718 24 24.53255042480025 25.20800821416585 25.326081868782484 24.933359492251416 25 25.200499144025756 24.919596183320902 25.051214049330806 24.828690623322537 26 24.86699285642439 25.26909659114109 25.243999964147672 24.619910588286846 27 25.179963729398608 25.676757436120617 24.965148553109742 24.178130281371033 28 24.641919931800913 25.983752921715453 24.815086658055467 24.559240488428163 29 24.765909219923138 25.95373655911301 25.327794813164573 23.952559407799274 30 25.505283736290217 25.4016705191317 24.811680687249222 24.281365057328863 31 25.085990803878822 25.229081413657145 25.38880351830809 24.296124264155942 32 24.66193747952185 25.53159535871744 25.159547822519045 24.646919339241663 33 24.67500365992477 25.09403765888306 25.13082612718214 25.100132554010035 34 25.05113437749908 25.266308077030708 25.420194220007787 24.26236332546242 35 25.024145544502197 25.387787702453597 25.079856072835987 24.508210680208222 36 25.01131837959445 25.49187895060247 25.12001067602545 24.37679199377763 37 24.582942858366387 25.61178505734878 25.664607481782536 24.140664602502294 38 25.136383237444964 25.232347958757877 25.211912133920382 24.419356669876777 39 24.379540671972148 25.73350369826684 25.665384282141858 24.221571347619157 40 25.384700418974244 25.07535461434352 25.50402890494055 24.035916061741684 41 24.752803203604355 25.354445040876627 25.31419084789751 24.578560907621508 42 24.666578363719836 25.456544493232375 25.36253173179673 24.514345411251057 43 24.71406277542801 25.07384084954074 25.258301057942333 24.95379531708891 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 491.0 1 511.0 2 531.0 3 595.5 4 660.0 5 660.0 6 1082.0 7 1504.0 8 1533.5 9 1563.0 10 2333.5 11 3104.0 12 3104.0 13 7908.0 14 12712.0 15 18199.0 16 23686.0 17 20091.5 18 16497.0 19 16497.0 20 22026.0 21 27555.0 22 26192.5 23 24830.0 24 31068.5 25 37307.0 26 37307.0 27 46199.5 28 55092.0 29 65450.5 30 75809.0 31 89528.5 32 103248.0 33 103248.0 34 120615.5 35 137983.0 36 161448.0 37 184913.0 38 208994.0 39 233075.0 40 233075.0 41 257698.0 42 282321.0 43 308620.5 44 334920.0 45 362951.0 46 390982.0 47 390982.0 48 419325.5 49 447669.0 50 461947.0 51 476225.0 52 472309.5 53 468394.0 54 468394.0 55 444180.5 56 419967.0 57 385649.5 58 351332.0 59 320338.0 60 289344.0 61 289344.0 62 252054.0 63 214764.0 64 181239.5 65 147715.0 66 121926.5 67 96138.0 68 96138.0 69 78837.0 70 61536.0 71 49980.5 72 38425.0 73 31468.0 74 24511.0 75 24511.0 76 19832.0 77 15153.0 78 12157.0 79 9161.0 80 7216.5 81 5272.0 82 5272.0 83 4071.0 84 2870.0 85 2264.5 86 1659.0 87 1303.5 88 948.0 89 948.0 90 702.5 91 457.0 92 307.5 93 158.0 94 121.0 95 84.0 96 84.0 97 52.0 98 20.0 99 15.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5020595.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.19014501976571 #Duplication Level Percentage of deduplicated Percentage of total 1 79.37793517905021 43.015018187222935 2 10.215301323440661 11.07137320275708 3 3.641295730304614 5.919670310551822 4 1.8609381874580277 4.033780410046819 5 1.1037559957194198 2.990634873723563 6 0.7324310803397213 2.38143278763559 7 0.49422051896262104 1.8747317116029814 8 0.3790838939521125 1.643408895033797 9 0.3007311484318097 1.4666998090932406 >10 1.758908486993865 17.440741238363195 >50 0.10138581502516908 3.710812058950418 >100 0.03213442052819689 2.9479138774344738 >500 0.001178492120758503 0.42500574897748444 >1k 5.524165837936728E-4 0.4099372133740672 >5k 7.365554450536887E-5 0.21122513345649407 >10k+ 7.365554450536887E-5 0.4576145417760213 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12356 0.24610628819890867 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10574 0.21061248716536585 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5322 0.10600337211027777 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5262 0.10480829463440092 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.9917957931281054E-5 7.967183172512421E-5 2 0.0 0.0 0.0 1.9917957931281054E-5 7.967183172512421E-5 3 0.0 0.0 0.0 1.9917957931281054E-5 7.967183172512421E-5 4 0.0 0.0 0.0 7.967183172512421E-5 7.967183172512421E-5 5 0.0 0.0 0.0 9.958978965640527E-5 7.967183172512421E-5 6 0.0 0.0 0.0 1.1950774758768632E-4 1.1950774758768632E-4 7 0.0 0.0 0.0 1.1950774758768632E-4 1.3942570551896737E-4 8 0.0 0.0 0.0 1.1950774758768632E-4 1.5934366345024843E-4 9 0.0 0.0 0.0 1.3942570551896737E-4 2.7885141103793474E-4 10 0.0 0.0 0.0 1.3942570551896737E-4 2.7885141103793474E-4 11 0.0 0.0 0.0 1.5934366345024843E-4 2.7885141103793474E-4 12 0.0 0.0 0.0 1.5934366345024843E-4 2.7885141103793474E-4 13 0.0 1.9917957931281054E-5 0.0 1.5934366345024843E-4 2.7885141103793474E-4 14 0.0 1.9917957931281054E-5 0.0 1.5934366345024843E-4 4.3819507448818315E-4 15 0.0 1.9917957931281054E-5 0.0 1.5934366345024843E-4 4.3819507448818315E-4 16 0.0 1.9917957931281054E-5 0.0 1.5934366345024843E-4 5.377848641445885E-4 17 0.0 1.9917957931281054E-5 0.0 1.5934366345024843E-4 5.377848641445885E-4 18 0.0 1.9917957931281054E-5 0.0 1.5934366345024843E-4 5.776207800071506E-4 19 0.0 1.9917957931281054E-5 0.0 1.5934366345024843E-4 5.776207800071506E-4 20 0.0 1.9917957931281054E-5 0.0 1.5934366345024843E-4 5.975387379384316E-4 21 0.0 1.9917957931281054E-5 0.0 1.9917957931281054E-4 5.975387379384316E-4 22 0.0 1.9917957931281054E-5 0.0 1.9917957931281054E-4 5.975387379384316E-4 23 0.0 1.9917957931281054E-5 0.0 1.9917957931281054E-4 7.768003593199611E-4 24 0.0 1.9917957931281054E-5 0.0 2.1909753724409157E-4 7.768003593199611E-4 25 0.0 3.983591586256211E-5 0.0 3.1868732690049686E-4 7.768003593199611E-4 26 0.0 3.983591586256211E-5 0.0 3.983591586256211E-4 7.768003593199611E-4 27 0.0 3.983591586256211E-5 0.0 0.001075569728289177 7.768003593199611E-4 28 0.0 3.983591586256211E-5 0.0 0.0024897447414101315 7.768003593199611E-4 29 1.9917957931281054E-5 3.983591586256211E-5 0.0 0.006015223295246878 7.768003593199611E-4 30 1.9917957931281054E-5 3.983591586256211E-5 0.0 0.010118322629090775 7.768003593199611E-4 31 1.9917957931281054E-5 3.983591586256211E-5 0.0 0.022268276967172217 7.967183172512422E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 60 9.242725E-4 18.5 2 GGTATCA 7705 0.0 12.821545 1 TCTATAC 480 0.0 12.718749 3 GTATTAG 500 0.0 11.469999 1 TATACTG 845 0.0 11.165681 5 TATACCG 200 2.6620091E-6 11.1 5 GTATAGA 590 0.0 10.974576 1 CGTACTA 220 7.021208E-7 10.931818 29 ATAGCAC 715 0.0 10.867133 3 TAGACAG 1110 0.0 10.833333 5 TATGACT 655 0.0 10.732824 4 GGGTAAG 4150 0.0 10.698795 1 CTAGGAC 765 0.0 10.640523 3 TAGACTG 770 0.0 10.571428 5 ACCGTAT 210 4.7752565E-6 10.571428 8 GGACCGT 300 3.3178367E-9 10.483333 6 TAGGACT 725 0.0 10.462069 4 CGTATAC 160 4.8270077E-4 10.40625 3 TCGTTAC 1080 0.0 10.277777 23 TAGGACA 685 0.0 10.2627735 4 >>END_MODULE