##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727241.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5860612 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.231844728844017 31.0 31.0 34.0 30.0 34.0 2 31.458192591490445 31.0 31.0 34.0 30.0 34.0 3 31.60799025767275 31.0 31.0 34.0 30.0 34.0 4 35.41969063981714 37.0 35.0 37.0 33.0 37.0 5 35.23386226557909 37.0 35.0 37.0 33.0 37.0 6 35.23194574218529 37.0 35.0 37.0 32.0 37.0 7 35.13379285303309 37.0 35.0 37.0 32.0 37.0 8 35.13646714711706 37.0 35.0 37.0 32.0 37.0 9 36.71736296482347 39.0 35.0 39.0 32.0 39.0 10 36.452918227652674 38.0 35.0 39.0 32.0 39.0 11 36.60693371272488 39.0 35.0 39.0 32.0 39.0 12 36.45269726096865 38.0 35.0 39.0 32.0 39.0 13 36.521435986548845 38.0 35.0 39.0 32.0 39.0 14 37.54074847473267 39.0 36.0 41.0 32.0 41.0 15 37.53665589873549 39.0 36.0 41.0 32.0 41.0 16 37.48398409585893 39.0 36.0 41.0 32.0 41.0 17 37.45824343942237 39.0 36.0 41.0 32.0 41.0 18 37.39023467173735 39.0 36.0 41.0 32.0 41.0 19 37.399811828525756 39.0 36.0 41.0 32.0 41.0 20 37.3119088927914 39.0 36.0 41.0 31.0 41.0 21 37.20987159702775 39.0 36.0 40.0 31.0 41.0 22 37.127255310537535 39.0 36.0 40.0 31.0 41.0 23 37.014217286522296 39.0 36.0 40.0 31.0 41.0 24 36.877972812395704 39.0 36.0 40.0 30.0 41.0 25 36.75310121195534 39.0 35.0 40.0 30.0 41.0 26 36.532424600024704 38.0 35.0 40.0 30.0 41.0 27 36.36090770042446 38.0 35.0 40.0 30.0 41.0 28 36.12975231938234 38.0 35.0 40.0 29.0 41.0 29 36.076660082598885 38.0 35.0 40.0 29.0 41.0 30 35.97948303009993 38.0 34.0 40.0 29.0 41.0 31 36.129003933377604 38.0 35.0 40.0 30.0 41.0 32 36.10273176248487 38.0 35.0 40.0 29.0 41.0 33 36.09311672569349 38.0 35.0 40.0 29.0 41.0 34 36.14495687481103 38.0 35.0 40.0 29.0 41.0 35 35.92948176743316 38.0 35.0 40.0 28.0 41.0 36 35.88206760659126 38.0 34.0 40.0 28.0 41.0 37 35.80595149448556 38.0 34.0 40.0 27.0 41.0 38 35.70329446822277 38.0 34.0 40.0 27.0 41.0 39 35.62813525276882 38.0 34.0 40.0 27.0 41.0 40 35.4314875306538 38.0 34.0 40.0 26.0 41.0 41 35.34886117695558 38.0 34.0 40.0 26.0 41.0 42 35.13674732263456 38.0 33.0 40.0 25.0 41.0 43 34.78022755985211 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 8.0 13 5.0 14 12.0 15 61.0 16 151.0 17 307.0 18 487.0 19 1021.0 20 2204.0 21 4218.0 22 7760.0 23 13439.0 24 22081.0 25 34111.0 26 50751.0 27 72471.0 28 99842.0 29 133855.0 30 173085.0 31 217323.0 32 267180.0 33 326019.0 34 400111.0 35 486312.0 36 603104.0 37 774332.0 38 1041464.0 39 1128897.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.35335831820977 19.175676533440537 12.583429853400977 25.887535294948723 2 18.409749698495652 22.375291181194047 33.76840166180597 25.446557458504333 3 19.99990785945222 23.970073432603968 30.059130343383934 25.97088836455988 4 14.625605653471002 15.531159544429832 34.37509597973727 35.468138822361894 5 14.518278978372907 37.53073911052292 33.212179888380255 14.738802022723906 6 34.63761122558531 35.167504690636406 15.592996089828162 14.601887993950118 7 28.766876223848293 31.653741964149816 21.088872629684406 18.490509182317478 8 28.183165853668523 33.06115470534476 19.88749639116188 18.86818304982483 9 28.127403759197843 13.270508267737227 19.04575836107219 39.556329611992744 10 17.125941795839754 26.37784245058366 32.06530307756255 24.430912676014042 11 37.07996707511093 21.80937758718714 20.630507530612842 20.48014780708909 12 21.936139092640836 25.37299858786079 28.8222799939665 23.86858232553187 13 30.29983899292429 18.847604994154192 24.963621546691712 25.888934466229806 14 23.010583195065635 20.62733380063379 24.821230274244396 31.54085273005618 15 25.880829510638137 27.53128854119672 21.906244603805884 24.68163734435926 16 24.88905595524836 25.818003307504405 24.46481698498382 24.828123752263416 17 24.22267503803357 25.9122255491406 25.045711949537008 24.819387463288816 18 24.296694611416008 24.459339741310295 26.740978587219217 24.50298706005448 19 24.752107800345765 25.245042667898847 26.6325769390637 23.370272592691684 20 24.345443786416844 24.346501696409863 26.113023691041143 25.195030826132154 21 25.403183148790603 25.218458413558174 26.157507099941096 23.220851337710123 22 25.488396092421745 24.34527315577281 25.466333550148008 24.699997201657435 23 23.68254373434037 24.705610949846193 26.359175458126217 25.252669857687216 24 23.900473192902037 25.399497526879443 26.180866435109508 24.519162845109012 25 24.610450239667802 24.437396640487375 25.586594028063963 25.36555909178086 26 23.977171667395826 25.7159832454358 26.284899938777723 24.021945148390646 27 25.296538996268648 25.07512867256867 25.30401261847739 24.3243197126853 28 23.71025415093168 25.943962848931136 26.134079512515072 24.21170348762211 29 23.841725062160744 25.826534839706163 26.4635331600181 23.868206938114994 30 24.152409338819904 26.07526312951617 26.14754227032945 23.624785261334484 31 24.367455139497377 25.770994565072726 25.536172672751583 24.325377622678314 32 23.664098561720177 25.758009573061653 25.411253978253466 25.166637886964704 33 23.224809968651737 25.199671979649906 26.275378748840566 25.300139302857787 34 24.497492753316546 25.397825346567902 26.548473094618785 23.556208805496766 35 24.559875316775788 25.186311600221956 26.62566639798028 23.628146685021974 36 23.217063337412544 25.89900167422788 26.49581647786955 24.38811851049003 37 23.647427947797944 25.468841820615324 26.815032286730467 24.06869794485627 38 23.39847783815069 24.78720652382379 27.152642079018367 24.66167355900715 39 23.511657144339193 24.580692255348076 27.155986439641456 24.751664160671275 40 23.88143081302772 24.608436798068187 27.645832892537502 23.86429949636659 41 22.530428562750785 24.97556569177417 28.250547894997997 24.24345785047705 42 23.361485114523877 24.943674824404006 28.064850565094567 23.62998949597755 43 22.44263909639471 23.963470026679808 28.059748708837915 25.534142168087566 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1281.0 1 1390.0 2 1499.0 3 2747.5 4 3996.0 5 3996.0 6 6306.5 7 8617.0 8 8230.5 9 7844.0 10 10540.5 11 13237.0 12 13237.0 13 23101.5 14 32966.0 15 52224.5 16 71483.0 17 63340.0 18 55197.0 19 55197.0 20 57716.5 21 60236.0 22 49968.0 23 39700.0 24 46652.0 25 53604.0 26 53604.0 27 62107.5 28 70611.0 29 79076.0 30 87541.0 31 97883.5 32 108226.0 33 108226.0 34 126837.5 35 145449.0 36 175490.0 37 205531.0 38 236986.5 39 268442.0 40 268442.0 41 294188.5 42 319935.0 43 338702.0 44 357469.0 45 392356.5 46 427244.0 47 427244.0 48 470359.5 49 513475.0 50 521045.5 51 528616.0 52 508769.0 53 488922.0 54 488922.0 55 468819.0 56 448716.0 57 430688.0 58 412660.0 59 384211.5 60 355763.0 61 355763.0 62 298553.0 63 241343.0 64 212863.5 65 184384.0 66 155989.5 67 127595.0 68 127595.0 69 106105.5 70 84616.0 71 71893.0 72 59170.0 73 43895.0 74 28620.0 75 28620.0 76 22477.5 77 16335.0 78 14361.5 79 12388.0 80 9819.0 81 7250.0 82 7250.0 83 6043.5 84 4837.0 85 4280.5 86 3724.0 87 2431.5 88 1139.0 89 1139.0 90 812.5 91 486.0 92 346.5 93 207.0 94 222.0 95 237.0 96 237.0 97 121.5 98 6.0 99 10.5 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5860612.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.08214654043163 #Duplication Level Percentage of deduplicated Percentage of total 1 79.32638224948474 34.17550824594596 2 10.217764308072027 8.804064384719021 3 3.5447428943554398 4.581453984683245 4 1.8046087043876848 3.1098566660227487 5 1.0788320040696844 2.323919924591884 6 0.7201042007739564 1.8614180821274393 7 0.49172352362022653 1.4829153431388795 8 0.39683127242138433 1.367707442422722 9 0.2938776971903798 1.1394793813788484 >10 1.8785859907557119 15.047100681211306 >50 0.1366729712252907 4.047967360342689 >100 0.08614145092191651 7.318197131027768 >500 0.01232201014378913 3.7297162248042435 >1k 0.010816414110212596 8.39074866734614 >5k 4.3582620956726014E-4 1.0509793907971443 >10k+ 1.5848225802445824E-4 1.5689670894398517 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 34775 0.5933680646321579 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 23547 0.40178397750951605 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 22139 0.37775918282937004 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11456 0.19547446580664274 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 8800 0.1501549667509127 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.706306440351281E-5 2 0.0 0.0 0.0 0.0 3.412612880702562E-5 3 0.0 0.0 0.0 0.0 3.412612880702562E-5 4 0.0 0.0 0.0 1.706306440351281E-5 3.412612880702562E-5 5 0.0 0.0 0.0 1.706306440351281E-5 3.412612880702562E-5 6 0.0 0.0 0.0 1.706306440351281E-5 5.118919321053842E-5 7 0.0 0.0 0.0 3.412612880702562E-5 5.118919321053842E-5 8 0.0 0.0 0.0 3.412612880702562E-5 6.825225761405124E-5 9 0.0 0.0 0.0 3.412612880702562E-5 1.5356757963161526E-4 10 0.0 0.0 0.0 3.412612880702562E-5 1.5356757963161526E-4 11 0.0 0.0 0.0 3.412612880702562E-5 1.7063064403512808E-4 12 0.0 1.706306440351281E-5 0.0 5.118919321053842E-5 1.8769370843864087E-4 13 0.0 1.706306440351281E-5 0.0 1.0237838642107685E-4 1.8769370843864087E-4 14 0.0 1.706306440351281E-5 0.0 1.1944145082458965E-4 2.2181983724566648E-4 15 0.0 1.706306440351281E-5 0.0 2.388829016491793E-4 2.388829016491793E-4 16 0.0 1.706306440351281E-5 0.0 3.9245048128079454E-4 3.071351592632305E-4 17 0.0 1.706306440351281E-5 0.0 5.972072541229483E-4 3.241982236667433E-4 18 0.0 1.706306440351281E-5 0.0 7.166487049475379E-4 3.241982236667433E-4 19 0.0 1.706306440351281E-5 0.0 8.872793489826659E-4 3.241982236667433E-4 20 0.0 1.706306440351281E-5 0.0 0.001160288379438871 3.241982236667433E-4 21 0.0 1.706306440351281E-5 0.0 0.0021328830504391007 3.241982236667433E-4 22 0.0 1.706306440351281E-5 0.0 0.003378486751895536 3.241982236667433E-4 23 0.0 1.706306440351281E-5 0.0 0.005170108514264381 4.948288677018714E-4 24 0.0 1.706306440351281E-5 0.0 0.00820733397808966 5.28954996508897E-4 25 0.0 1.706306440351281E-5 0.0 0.009640631387984737 5.630811253159227E-4 26 0.0 1.706306440351281E-5 0.0 0.01330919023473999 5.630811253159227E-4 27 0.0 1.706306440351281E-5 0.0 0.03480865138316613 5.630811253159227E-4 28 0.0 1.706306440351281E-5 0.0 0.07599888885324604 5.630811253159227E-4 29 0.0 1.706306440351281E-5 0.0 0.1303106228496273 5.630811253159227E-4 30 0.0 1.706306440351281E-5 0.0 0.2159330800264546 5.630811253159227E-4 31 0.0 1.706306440351281E-5 0.0 0.5057662919845232 5.801441897194355E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3580 0.0 19.223465 37 AAGACGG 2130 0.0 18.5 5 CAAGACG 2205 0.0 18.03855 4 CGAACGA 1250 0.0 15.984 16 ACGAACG 1250 0.0 15.984 15 GACGGAC 2490 0.0 15.528112 7 TAACGAA 1335 0.0 15.104868 13 ACGGACC 2540 0.0 15.076772 8 CGCAAGA 2705 0.0 14.909428 2 TCTTATA 5930 0.0 14.8499155 37 AGACGGA 2645 0.0 14.827977 6 AACGAAC 1360 0.0 14.827206 14 CGGACCA 2585 0.0 14.814314 9 GCGCAAG 2790 0.0 14.654121 1 TCTAGCG 1200 0.0 14.645833 28 ATACCGT 1645 0.0 14.395138 6 CGAGCCG 1925 0.0 14.223376 15 TACCGTC 1610 0.0 14.133541 7 GAGCGAA 2770 0.0 14.02527 16 CTAGCGG 1255 0.0 14.0039835 29 >>END_MODULE