##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727238.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4909835 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.230605101800773 31.0 31.0 34.0 30.0 34.0 2 31.474420016151257 31.0 31.0 34.0 30.0 34.0 3 31.631555439235736 31.0 31.0 34.0 30.0 34.0 4 35.43694889950477 37.0 35.0 37.0 33.0 37.0 5 35.24550906496858 37.0 35.0 37.0 33.0 37.0 6 35.24168775529117 37.0 35.0 37.0 32.0 37.0 7 35.14629860270254 37.0 35.0 37.0 32.0 37.0 8 35.14376226492336 37.0 35.0 37.0 32.0 37.0 9 36.73353014918017 39.0 35.0 39.0 32.0 39.0 10 36.461903098576634 38.0 35.0 39.0 32.0 39.0 11 36.61651420057904 39.0 35.0 39.0 32.0 39.0 12 36.46055315504493 38.0 35.0 39.0 32.0 39.0 13 36.5240076295843 38.0 35.0 39.0 32.0 39.0 14 37.56173578134499 39.0 36.0 41.0 32.0 41.0 15 37.55997502971078 39.0 36.0 41.0 32.0 41.0 16 37.50038280308809 39.0 36.0 41.0 32.0 41.0 17 37.4465610351468 39.0 36.0 41.0 32.0 41.0 18 37.36213538744174 39.0 36.0 41.0 32.0 41.0 19 37.36088850236312 39.0 36.0 41.0 31.0 41.0 20 37.26538447829713 39.0 36.0 40.0 31.0 41.0 21 37.15349640059188 39.0 36.0 40.0 31.0 41.0 22 37.0826266055784 39.0 36.0 40.0 31.0 41.0 23 36.96306128413684 39.0 36.0 40.0 31.0 41.0 24 36.82311055259495 39.0 36.0 40.0 30.0 41.0 25 36.69217926875343 39.0 35.0 40.0 30.0 41.0 26 36.46951577802513 38.0 35.0 40.0 30.0 41.0 27 36.306947789487836 38.0 35.0 40.0 30.0 41.0 28 36.05156670234336 38.0 35.0 40.0 29.0 41.0 29 35.99805451710699 38.0 34.0 40.0 29.0 41.0 30 35.91259706283409 38.0 34.0 40.0 28.0 41.0 31 36.100847991836794 38.0 35.0 40.0 29.0 41.0 32 36.09322573976519 38.0 35.0 40.0 29.0 41.0 33 36.106510096571476 38.0 35.0 40.0 29.0 41.0 34 36.16735083765544 38.0 35.0 40.0 29.0 41.0 35 35.961412959905985 38.0 35.0 40.0 28.0 41.0 36 35.919416029255565 38.0 34.0 40.0 28.0 41.0 37 35.85887794600022 38.0 34.0 40.0 28.0 41.0 38 35.76222989163587 38.0 34.0 40.0 27.0 41.0 39 35.70187918738613 38.0 34.0 40.0 27.0 41.0 40 35.51718642276166 38.0 34.0 40.0 27.0 41.0 41 35.449718778736965 38.0 34.0 40.0 26.0 41.0 42 35.26232673806757 38.0 33.0 40.0 26.0 41.0 43 34.90284826272166 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 8.0 14 17.0 15 44.0 16 142.0 17 234.0 18 450.0 19 882.0 20 1782.0 21 3607.0 22 6645.0 23 11298.0 24 18682.0 25 28535.0 26 42249.0 27 59781.0 28 83162.0 29 111901.0 30 143877.0 31 181775.0 32 223245.0 33 273335.0 34 336467.0 35 407967.0 36 504994.0 37 641142.0 38 890761.0 39 936850.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.08933701438032 19.081598465121534 12.32088247364728 26.50818204685086 2 18.84611193655184 21.94338506283816 33.41678488177301 25.79371811883699 3 20.130778325544547 23.363575354365267 29.778454876793216 26.727191443296977 4 15.015942490939105 15.376402669336139 34.18929556695897 35.418359272765784 5 14.956673696773926 36.86822469594192 33.23818417523196 14.936917432052196 6 35.33330549804627 34.70259183862594 15.373388311419834 14.590714351907957 7 29.27318331471424 31.220926976161113 20.873063962434582 18.632825746690063 8 27.9410000539733 33.006791470589135 19.93380632954061 19.118402145896958 9 28.306531685891684 13.232766477895897 18.65372257927201 39.80697925694041 10 17.245100904612883 25.763554172390723 32.20301700566312 24.788327917333273 11 37.784935746313266 21.19024366399278 20.441277558207148 20.5835430314868 12 22.168525011532974 24.707877148621087 28.45274841211568 24.67084942773026 13 30.507074066643785 18.46127212014253 24.48418327703477 26.547470536178913 14 23.314856812907156 20.366570363362516 23.80860049268458 32.50997233104575 15 26.374246792407487 27.19238019200238 21.148144489580606 25.28522852600953 16 25.67933545628315 25.44784091522424 23.79642085732005 25.076402771172557 17 24.906600730981797 25.329914345390424 24.229083054725873 25.534401868901906 18 25.05377471951705 24.200935469318217 25.774185894230662 24.971103916934073 19 25.535847946010403 24.981715271490792 25.350444566874447 24.131992215624354 20 25.04249124461413 23.850475626981353 24.90996133271281 26.197071795691706 21 25.97999729115133 25.00550425828974 25.08173899937574 23.932759451183188 22 26.15008447330715 23.955713379370184 24.33055285971932 25.56364928760335 23 24.291366206807357 24.21337987936458 25.341503329541627 26.15375058428644 24 24.583229375325242 24.93342444298026 25.13078341736535 25.352562764329146 25 25.54757950114413 23.78593170646264 24.37006538916277 26.296423403230456 26 24.79054795120406 25.1660595518994 25.17775037246669 24.865642124429844 27 26.352005719133125 24.411125832130814 24.127002231235878 25.109866217500183 28 24.419048705302725 25.452342084815477 24.867108568821557 25.26150064106024 29 24.616428046971027 25.198606470482204 25.41867496565567 24.766290516891097 30 25.203657556720337 25.36490533795942 25.048316287614554 24.383120817705688 31 25.442952767251853 25.091820804568787 24.322548517414535 25.14267791076482 32 24.62115325667767 24.98033029623195 24.219693737162245 26.178822709928134 33 24.080422254515682 24.39864068751801 25.146058879779055 26.37487817818725 34 25.493097018535245 24.72881471576947 25.44702622389551 24.331062041799775 35 25.622999550901405 24.464488114162698 25.54717215547977 24.365340179456133 36 24.15753278878007 25.222313988148276 25.480958117737153 25.1391951053345 37 24.660523215138593 24.83120104850774 25.844941836130946 24.663333900222717 38 24.53127243583542 24.006651954699088 26.071263087252422 25.390812522213068 39 24.53776959918205 23.83833672618326 26.05749480379687 25.56639887083782 40 25.093755696474524 23.847379799932177 26.506206420378685 24.55265808321461 41 23.51958874381726 24.419415316400652 27.084637263777704 24.976358676004388 42 24.626346913898328 24.34588942398268 26.890496320141104 24.137267341977886 43 23.60621079934458 23.22528150131318 26.85959915149898 26.308908547843256 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 421.0 1 477.5 2 534.0 3 1034.0 4 1534.0 5 1534.0 6 2305.0 7 3076.0 8 3078.0 9 3080.0 10 4048.0 11 5016.0 12 5016.0 13 8892.0 14 12768.0 15 20336.5 16 27905.0 17 25401.5 18 22898.0 19 22898.0 20 25226.5 21 27555.0 22 24948.5 23 22342.0 24 27524.5 25 32707.0 26 32707.0 27 39374.0 28 46041.0 29 53487.0 30 60933.0 31 70151.0 32 79369.0 33 79369.0 34 95779.5 35 112190.0 36 138349.0 37 164508.0 38 191949.0 39 219390.0 40 219390.0 41 242485.5 42 265581.0 43 282229.5 44 298878.0 45 330739.5 46 362601.0 47 362601.0 48 410760.5 49 458920.0 50 468277.0 51 477634.0 52 455567.0 53 433500.0 54 433500.0 55 415053.5 56 396607.0 57 384569.0 58 372531.0 59 346280.0 60 320029.0 61 320029.0 62 267375.0 63 214721.0 64 189195.5 65 163670.0 66 138374.0 67 113078.0 68 113078.0 69 93506.5 70 73935.0 71 62925.0 72 51915.0 73 38012.5 74 24110.0 75 24110.0 76 18950.5 77 13791.0 78 12253.0 79 10715.0 80 8467.0 81 6219.0 82 6219.0 83 5220.0 84 4221.0 85 3663.0 86 3105.0 87 2049.0 88 993.0 89 993.0 90 697.0 91 401.0 92 296.5 93 192.0 94 195.0 95 198.0 96 198.0 97 104.0 98 10.0 99 11.5 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4909835.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.913928830785906 #Duplication Level Percentage of deduplicated Percentage of total 1 80.15870701735484 35.20083755127939 2 9.630542791373067 8.4582994148439 3 3.4967437966386266 4.606672746752422 4 1.7325607478517888 3.043341975047066 5 1.0613915786277355 2.330493712272694 6 0.7307377344219947 1.9253738918026322 7 0.5056198445139495 1.554262770719303 8 0.38690291289513157 1.3592341585040453 9 0.28035548485203343 1.1080359728201405 >10 1.7889063348033998 14.427624941791104 >50 0.11967268041059073 3.6265608183916775 >100 0.08200723586369657 7.47381182194222 >500 0.013576866319060077 4.198752110912502 >1k 0.011995997390398926 9.67921981611343 >5k 2.324805695813698E-4 0.7394476616043217 >10k+ 4.6496113916273966E-5 0.26803063520309073 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13127 0.267361326806298 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8682 0.1768287529010649 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 8551 0.17416063879947086 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8293 0.16890587972915588 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT 5406 0.11010553307799549 No Hit GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGG 5283 0.10760035724214764 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGG 4918 0.10016629886747722 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 2.0367283218275157E-5 5 0.0 0.0 0.0 0.0 2.0367283218275157E-5 6 0.0 0.0 0.0 0.0 8.146913287310063E-5 7 0.0 0.0 0.0 0.0 8.146913287310063E-5 8 0.0 0.0 0.0 2.0367283218275157E-5 1.0183641609137578E-4 9 0.0 0.0 0.0 2.0367283218275157E-5 1.4257098252792608E-4 10 0.0 0.0 0.0 2.0367283218275157E-5 1.4257098252792608E-4 11 0.0 0.0 0.0 2.0367283218275157E-5 1.4257098252792608E-4 12 0.0 0.0 0.0 2.0367283218275157E-5 1.4257098252792608E-4 13 0.0 0.0 0.0 2.0367283218275157E-5 1.4257098252792608E-4 14 0.0 0.0 0.0 6.110184965482547E-5 2.0367283218275157E-4 15 0.0 0.0 0.0 1.0183641609137578E-4 2.0367283218275157E-4 16 0.0 0.0 0.0 2.240401154010267E-4 2.240401154010267E-4 17 0.0 0.0 0.0 4.277129475837783E-4 2.444073986193019E-4 18 0.0 0.0 0.0 4.6844751402032856E-4 3.258765314924025E-4 19 0.0 0.0 0.0 6.721203462030801E-4 3.258765314924025E-4 20 0.0 0.0 0.0 0.0010183641609137577 3.258765314924025E-4 21 0.0 0.0 0.0 0.0017719536399899386 3.4624381471067765E-4 22 0.0 0.0 0.0 0.0032180307484874745 3.4624381471067765E-4 23 0.0 0.0 0.0 0.004969617105259138 4.480802308020534E-4 24 0.0 0.0 0.0 0.006884141727777003 4.480802308020534E-4 25 0.0 0.0 0.0 0.008085811437655237 4.480802308020534E-4 26 0.0 0.0 0.0 0.010529885423848256 4.480802308020534E-4 27 0.0 0.0 0.0 0.02393155778147331 4.480802308020534E-4 28 0.0 0.0 0.0 0.0489425815735152 4.480802308020534E-4 29 0.0 0.0 0.0 0.08169317298850165 4.6844751402032856E-4 30 0.0 0.0 0.0 0.13434260010774293 4.6844751402032856E-4 31 0.0 0.0 0.0 0.34630491656033247 4.888147972386038E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2200 0.0 18.584091 37 CAAGACG 1990 0.0 17.75628 4 AAGACGG 1965 0.0 17.605598 5 TCGTTAC 1180 0.0 15.207627 23 TACGGAT 2225 0.0 14.883146 27 GACGGAC 2300 0.0 14.880434 7 CGCAAGA 2395 0.0 14.599164 2 TATACTG 495 0.0 14.575758 5 ACGGATG 2320 0.0 14.512931 28 TACTTAC 1100 0.0 14.463636 31 GTTACGG 1965 0.0 14.404581 25 ACGGACC 2360 0.0 14.345339 8 AGACGGA 2440 0.0 14.329918 6 GCGCAAG 2490 0.0 14.26506 1 TCTAGCG 1285 0.0 14.252918 28 TCTTATA 3650 0.0 14.141095 37 CCCTATA 250 0.0 14.059999 2 TATACCG 145 8.9263085E-7 14.034483 5 CTAGCGG 1295 0.0 14.0 29 CGGATGG 2425 0.0 13.960824 29 >>END_MODULE