##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727237.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7590323 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23996897101744 31.0 31.0 34.0 30.0 34.0 2 31.474989799511825 31.0 31.0 34.0 30.0 34.0 3 31.632680980769855 31.0 31.0 34.0 30.0 34.0 4 35.43950922773642 37.0 35.0 37.0 33.0 37.0 5 35.25255249348414 37.0 35.0 37.0 33.0 37.0 6 35.256489743585355 37.0 35.0 37.0 32.0 37.0 7 35.15881919649533 37.0 35.0 37.0 32.0 37.0 8 35.159636157776156 37.0 35.0 37.0 32.0 37.0 9 36.746317251584685 39.0 35.0 39.0 32.0 39.0 10 36.4814099479034 38.0 35.0 39.0 32.0 39.0 11 36.62644330155647 39.0 35.0 39.0 32.0 39.0 12 36.47659961242756 38.0 35.0 39.0 32.0 39.0 13 36.53929233314577 38.0 35.0 39.0 32.0 39.0 14 37.579404064886305 39.0 36.0 41.0 32.0 41.0 15 37.579473100156605 39.0 36.0 41.0 32.0 41.0 16 37.52399706837245 39.0 36.0 41.0 32.0 41.0 17 37.487199951833404 39.0 36.0 41.0 32.0 41.0 18 37.41008215328913 39.0 36.0 41.0 32.0 41.0 19 37.41215597807893 39.0 36.0 41.0 32.0 41.0 20 37.32780265082263 39.0 36.0 41.0 31.0 41.0 21 37.218075172822026 39.0 36.0 40.0 31.0 41.0 22 37.15421675731059 39.0 36.0 40.0 31.0 41.0 23 37.045866954541985 39.0 36.0 40.0 31.0 41.0 24 36.90574182416216 39.0 36.0 40.0 31.0 41.0 25 36.78989537072401 39.0 35.0 40.0 30.0 41.0 26 36.574351842470996 39.0 35.0 40.0 30.0 41.0 27 36.406853305188726 38.0 35.0 40.0 30.0 41.0 28 36.19140305359864 38.0 35.0 40.0 29.0 41.0 29 36.14034382990025 38.0 35.0 40.0 29.0 41.0 30 36.052361144578434 38.0 35.0 40.0 29.0 41.0 31 36.22015861512086 38.0 35.0 40.0 30.0 41.0 32 36.19379399269307 38.0 35.0 40.0 30.0 41.0 33 36.21510599746546 38.0 35.0 40.0 30.0 41.0 34 36.26609012554538 38.0 35.0 40.0 30.0 41.0 35 36.07022744618378 38.0 35.0 40.0 29.0 41.0 36 36.04086980224689 38.0 35.0 40.0 29.0 41.0 37 35.96658284502517 38.0 35.0 40.0 28.0 41.0 38 35.87189135429414 38.0 34.0 40.0 28.0 41.0 39 35.82220532643999 38.0 34.0 40.0 28.0 41.0 40 35.63668067880642 38.0 34.0 40.0 27.0 41.0 41 35.57138411632812 38.0 34.0 40.0 27.0 41.0 42 35.378650948055835 38.0 34.0 40.0 26.0 41.0 43 35.011566569696704 38.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 8.0 14 14.0 15 74.0 16 160.0 17 382.0 18 637.0 19 1292.0 20 2609.0 21 5006.0 22 9164.0 23 16307.0 24 27095.0 25 42171.0 26 63461.0 27 89712.0 28 125106.0 29 168402.0 30 217099.0 31 273622.0 32 339277.0 33 415074.0 34 511315.0 35 624784.0 36 776462.0 37 995432.0 38 1382535.0 39 1503120.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.59953100810071 18.845469422052265 12.122066478593862 26.43293309125316 2 18.242649225862984 21.910187484775022 33.96296837433664 25.884194915025354 3 19.93988925108984 23.708345481476876 29.82834854327016 26.523416724163123 4 14.537813476448894 15.481053968322561 34.51002019281656 35.471112362411986 5 14.447184922169978 37.21767835176448 33.634998141712806 14.700138584352734 6 34.9640324924249 35.205115777022925 15.427867825914653 14.402983904637523 7 29.125941017266328 31.196472139591425 21.063517323307586 18.614069519834665 8 28.108000147029315 33.40158251499969 19.833227123536112 18.65719021443488 9 27.94903457995134 13.287102538324127 18.630524682546447 40.133338199178084 10 16.96602371203439 26.103948409046623 32.428119330363145 24.50190854855584 11 37.543053174416954 21.318315439277093 20.608819940864176 20.52981144544178 12 22.132654960796792 25.04471812332624 28.92792572858889 23.894701187288078 13 30.596365925402647 18.53657611145138 24.80654644077729 26.060511522368678 14 23.00381683361828 20.144188857312134 24.56442235725673 32.28757195181286 15 25.936616926578747 26.94275329258057 21.801417410036436 25.319212370804244 16 25.21772788852332 25.46123531238394 24.34037392084632 24.98066287824642 17 24.491026271214018 25.74460928737815 24.924775928507916 24.839588512899912 18 24.984470357849066 23.97842621453659 26.40747962899603 24.62962379861832 19 25.155793765298263 25.120143108534382 25.985903366694675 23.738159759472687 20 24.71728805216853 24.01374750455284 25.801998149485865 25.46696629379277 21 25.570479675239117 24.959978646495017 25.593245504835565 23.8762961734303 22 25.493776747050156 24.269494196755524 24.999199638803248 25.237529417391062 23 23.885531617033955 24.17082909383435 25.974177910478907 25.96946137865279 24 24.331006730543614 25.261019853832305 25.629778864483104 24.778194551140974 25 25.052873243997652 24.007647632386657 25.091303756111564 25.848175367504123 26 24.47690302507548 25.090579149266773 25.885894447443146 24.5466233782146 27 25.701528116787653 24.506901748449966 24.8321711737432 24.959398961019183 28 24.15165994912206 25.18815075458581 25.84388042511498 24.816308871177156 29 24.315421096045583 25.088642472790685 26.06267216823316 24.533264262930576 30 24.446443188254307 25.53067899745505 25.95789401847589 24.06498379581475 31 25.09208106163598 24.990293561947233 24.918096370865904 24.999529005550883 32 24.016922600000026 25.117639921252362 25.148863888928048 25.716573589819564 33 23.75475984355343 24.601008415583895 25.90974059997183 25.734491140890842 34 24.86873088273055 24.721424898518812 26.11058844267892 24.299255776071714 35 25.036866020062646 24.791303347696797 26.23867258349875 23.9331580487418 36 24.013470836484824 25.23127144918602 25.897949270406546 24.85730844392261 37 24.372954879522254 24.877478863547704 26.24531261713105 24.504253639798993 38 24.12878872216637 24.311824411161425 26.61927562239446 24.940111244277745 39 24.384706685077827 23.87176408698286 26.35072315104377 25.392806076895543 40 24.571128264238556 24.2036998952482 26.977956010567667 24.247215829945574 41 23.278350605106002 24.43274153155274 27.438740090507345 24.85016777283391 42 24.465243442209246 24.514793375723272 27.100388217998102 23.919574964069383 43 23.533412214473614 23.337004235524628 27.31583359496032 25.813749955041438 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 626.0 1 730.5 2 835.0 3 2071.0 4 3307.0 5 3307.0 6 5304.5 7 7302.0 8 6875.0 9 6448.0 10 8511.5 11 10575.0 12 10575.0 13 18664.5 14 26754.0 15 43782.5 16 60811.0 17 55492.0 18 50173.0 19 50173.0 20 53796.0 21 57419.0 22 49236.0 23 41053.0 24 49281.0 25 57509.0 26 57509.0 27 68529.0 28 79549.0 29 91518.0 30 103487.0 31 118821.5 32 134156.0 33 134156.0 34 159247.0 35 184338.0 36 223557.0 37 262776.0 38 305443.0 39 348110.0 40 348110.0 41 381255.0 42 414400.0 43 438305.5 44 462211.0 45 510276.0 46 558341.0 47 558341.0 48 635055.5 49 711770.0 50 722108.5 51 732447.0 52 681431.5 53 630416.0 54 630416.0 55 610700.0 56 590984.0 57 568559.5 58 546135.0 59 514033.5 60 481932.0 61 481932.0 62 404489.5 63 327047.0 64 285916.5 65 244786.0 66 206417.5 67 168049.0 68 168049.0 69 140435.0 70 112821.0 71 95562.0 72 78303.0 73 57567.5 74 36832.0 75 36832.0 76 29022.0 77 21212.0 78 18319.5 79 15427.0 80 12244.0 81 9061.0 82 9061.0 83 7575.5 84 6090.0 85 5242.5 86 4395.0 87 2838.0 88 1281.0 89 1281.0 90 915.0 91 549.0 92 417.0 93 285.0 94 295.0 95 305.0 96 305.0 97 156.0 98 7.0 99 8.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7590323.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.49408891984789 #Duplication Level Percentage of deduplicated Percentage of total 1 78.25654730741824 32.47184132534295 2 10.729665902228785 8.904354220546823 3 3.7604108426495344 4.681044656401798 4 1.912886869689283 3.1749399145798627 5 1.140598179573974 2.366404114252955 6 0.7577928111140563 1.8866353372312887 7 0.5178754085849396 1.5042137777258227 8 0.3952934117049434 1.3121871979771973 9 0.3152772235330538 1.1773927032914966 >10 1.9454046194539034 15.249715386168 >50 0.15694101845370437 4.45654802403388 >100 0.08834259015531398 7.146784599111402 >500 0.010591469149958408 3.0731227823947855 >1k 0.011513597320033084 9.308674147622813 >5k 6.679158659196226E-4 1.8248982185482672 >10k+ 1.9083310454846356E-4 1.4612435947706506 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 31696 0.4175843373200323 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 22169 0.29206925713174525 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 21808 0.28731320129591326 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 12054 0.15880747103911125 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 11761 0.15494729275684316 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 11234 0.14800424171672272 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9962 0.1312460615971152 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT 8159 0.10749213175776577 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.269867962140742E-5 2 0.0 0.0 0.0 0.0 5.269867962140742E-5 3 0.0 0.0 0.0 0.0 5.269867962140742E-5 4 0.0 0.0 0.0 0.0 5.269867962140742E-5 5 0.0 0.0 0.0 0.0 5.269867962140742E-5 6 0.0 0.0 0.0 0.0 6.587334952675927E-5 7 0.0 0.0 0.0 0.0 6.587334952675927E-5 8 0.0 0.0 0.0 0.0 7.904801943211112E-5 9 0.0 0.0 0.0 1.3174669905351855E-5 7.904801943211112E-5 10 0.0 0.0 0.0 3.952400971605556E-5 7.904801943211112E-5 11 0.0 0.0 0.0 3.952400971605556E-5 7.904801943211112E-5 12 0.0 0.0 0.0 3.952400971605556E-5 1.8444537867492596E-4 13 0.0 0.0 0.0 3.952400971605556E-5 1.9762004858027782E-4 14 0.0 0.0 0.0 5.269867962140742E-5 2.1079471848562968E-4 15 0.0 1.3174669905351855E-5 0.0 9.222268933746298E-5 2.634933981070371E-4 16 0.0 1.3174669905351855E-5 0.0 1.712707087695741E-4 2.7666806801238895E-4 17 0.0 1.3174669905351855E-5 0.0 3.5571608744450005E-4 2.7666806801238895E-4 18 0.0 1.3174669905351855E-5 0.0 4.611134466873149E-4 2.7666806801238895E-4 19 0.0 1.3174669905351855E-5 0.0 6.455588253622409E-4 2.7666806801238895E-4 20 0.0 1.3174669905351855E-5 0.0 9.485762331853335E-4 3.820654272552038E-4 21 0.0 1.3174669905351855E-5 0.0 0.0016468337381689818 4.084147670659075E-4 22 0.0 1.3174669905351855E-5 0.0 0.002542711291732908 4.2158943697125935E-4 23 0.0 1.3174669905351855E-5 0.0 0.0038470036123627416 4.874627864980186E-4 24 0.0 1.3174669905351855E-5 0.0 0.005704632069017353 5.006374564033705E-4 25 0.0 1.3174669905351855E-5 0.0 0.00653463627305452 5.006374564033705E-4 26 0.0 1.3174669905351855E-5 0.0 0.008866552846301798 5.006374564033705E-4 27 0.0 1.3174669905351855E-5 0.0 0.021066297178657614 5.006374564033705E-4 28 0.0 2.634933981070371E-5 0.0 0.045953248629867265 5.006374564033705E-4 29 0.0 2.634933981070371E-5 0.0 0.0803391370828356 5.138121263087223E-4 30 0.0 2.634933981070371E-5 0.0 0.13551465464644916 5.138121263087223E-4 31 0.0 2.634933981070371E-5 0.0 0.3389579073248925 5.138121263087223E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 2740 0.0 18.297445 5 CAAGACG 2755 0.0 18.06352 4 CTTATAC 3410 0.0 17.2522 37 GCGCAAG 3225 0.0 15.373644 1 ACGGACC 3210 0.0 15.272586 8 GACGGAC 3225 0.0 15.258915 7 CGCAAGA 3275 0.0 15.025953 2 TCGTTTA 2090 0.0 14.782296 30 TCTTATA 5540 0.0 14.626354 37 AGACGGA 3450 0.0 14.585508 6 CGGACCA 3355 0.0 14.447093 9 CGCATCG 2215 0.0 14.282167 13 GTTACGG 1320 0.0 14.155303 25 ATACCGT 2000 0.0 14.1525 6 TCTAGCG 1715 0.0 14.131195 28 CGAGCCG 2475 0.0 14.0525255 15 GCAAGAC 3935 0.0 13.963152 3 ACCGTCG 1920 0.0 13.874999 8 CTAGCGG 1775 0.0 13.653522 29 TACCGTC 1965 0.0 13.651401 7 >>END_MODULE