##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727235.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3314180 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.973770887519688 31.0 31.0 33.0 28.0 34.0 2 31.21050636959972 31.0 31.0 34.0 28.0 34.0 3 31.364436150118582 31.0 31.0 34.0 28.0 34.0 4 35.2031009178741 35.0 35.0 37.0 33.0 37.0 5 34.98982010633098 35.0 35.0 37.0 32.0 37.0 6 35.00789003614771 36.0 35.0 37.0 32.0 37.0 7 34.91376931850412 36.0 35.0 37.0 32.0 37.0 8 34.92229721982512 36.0 35.0 37.0 32.0 37.0 9 36.47470324484488 38.0 35.0 39.0 32.0 39.0 10 36.19097665184148 38.0 35.0 39.0 32.0 39.0 11 36.340384046732524 38.0 35.0 39.0 32.0 39.0 12 36.17529705688889 38.0 35.0 39.0 31.0 39.0 13 36.245724734323424 38.0 35.0 39.0 32.0 39.0 14 37.2133321062827 39.0 36.0 40.0 31.0 41.0 15 37.213225895998406 39.0 36.0 40.0 31.0 41.0 16 37.13557501403062 39.0 36.0 40.0 31.0 41.0 17 37.10239968861076 39.0 36.0 40.0 31.0 41.0 18 37.00971944794791 39.0 36.0 40.0 31.0 41.0 19 36.99195970043872 39.0 36.0 40.0 31.0 41.0 20 36.911638474675485 39.0 36.0 40.0 31.0 41.0 21 36.78338140957944 39.0 36.0 40.0 30.0 41.0 22 36.71662734069966 39.0 35.0 40.0 30.0 41.0 23 36.586120548672675 38.0 35.0 40.0 30.0 41.0 24 36.42873531310912 38.0 35.0 40.0 30.0 41.0 25 36.30895213899064 38.0 35.0 40.0 30.0 41.0 26 36.04243432764666 38.0 34.0 40.0 29.0 41.0 27 35.86157903312433 38.0 34.0 40.0 27.0 41.0 28 35.610153039364185 38.0 34.0 40.0 27.0 41.0 29 35.55818875257228 38.0 34.0 40.0 27.0 41.0 30 35.45341683312313 38.0 34.0 40.0 27.0 41.0 31 35.652657067509914 38.0 34.0 40.0 27.0 41.0 32 35.60428824022835 38.0 34.0 40.0 27.0 41.0 33 35.618011091733095 38.0 34.0 40.0 27.0 41.0 34 35.677517515644894 38.0 34.0 40.0 27.0 41.0 35 35.44661213331805 38.0 34.0 40.0 26.0 41.0 36 35.414273515620756 38.0 34.0 40.0 26.0 41.0 37 35.32762976060443 38.0 34.0 40.0 26.0 41.0 38 35.228677983694304 38.0 33.0 40.0 26.0 41.0 39 35.175724311896154 38.0 33.0 40.0 26.0 41.0 40 34.954978607076264 38.0 33.0 40.0 25.0 41.0 41 34.88447247886355 38.0 33.0 40.0 25.0 41.0 42 34.663345684302 38.0 33.0 40.0 24.0 41.0 43 34.28862855970406 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 5.0 12 10.0 13 6.0 14 11.0 15 52.0 16 106.0 17 212.0 18 439.0 19 847.0 20 1783.0 21 3352.0 22 6012.0 23 10359.0 24 16596.0 25 24930.0 26 36098.0 27 49780.0 28 67785.0 29 88488.0 30 112000.0 31 136778.0 32 165254.0 33 198658.0 34 239779.0 35 286469.0 36 349712.0 37 440865.0 38 595815.0 39 481977.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.9497070165169 20.453023070563457 12.967461031084612 25.629808881835025 2 18.972747406598316 23.23775413526121 32.50843345865342 25.28106499948705 3 20.865402603358902 24.485091334809816 29.445594385338154 25.203911676493128 4 15.531262635101292 16.466576951161375 33.8566704282809 34.145489985456436 5 14.592206820389961 37.456776638565195 33.36526682316591 14.585749717878931 6 34.808821488271604 35.35830884260964 15.32535951577766 14.507510153341096 7 28.709786432843114 31.21695260969531 21.315378162924162 18.757882794537412 8 27.91553265061041 33.18636887555896 20.18260927288198 18.71548920094865 9 27.81635276297606 13.340675521546807 18.825531504022113 40.01744021145502 10 17.338889257674598 26.076042942749034 32.12420568587102 24.46086211370535 11 37.53948186278355 21.423338503038458 20.345334290835137 20.691845343342848 12 22.004206168645034 25.63059338961674 28.515077636097015 23.850122805641213 13 30.683064890862898 18.477300569069875 24.661545238942967 26.178089301124256 14 23.26279803752361 20.585152285029782 24.06906082349178 32.082988853954824 15 26.40601898508832 27.074479961860852 21.426325667284214 25.093175385766614 16 25.412409706171662 25.394396200568465 24.339293580915943 24.85390051234393 17 24.83464989831572 26.0659046883392 24.602284728047362 24.497160685297718 18 25.48874834800765 23.426247216506045 26.43721825609955 24.647786179386756 19 25.252279598573402 25.723346348116277 25.493214007688174 23.531160045622144 20 25.111128544617372 23.757822447784974 25.32626471706425 25.804784290533405 21 25.906076314503135 25.301673415445148 24.88413423531613 23.908116034735592 22 25.734872577832224 24.732120765920982 24.273666487637968 25.259340168608823 23 23.774870405349134 24.212686094297837 25.485761183761895 26.52668231659113 24 24.402899057987195 25.96953092469329 24.999577572732925 24.627992444586592 25 25.302940697246378 24.11217857810982 24.21473788388078 26.370142840763023 26 24.57690891864654 25.590764533006656 25.355442371868758 24.47688417647804 27 26.243505180768693 24.356190671599006 24.14455461079362 25.255749536838675 28 24.47359527847009 25.071028127621314 25.875208950630324 24.580167643278276 29 24.63091926207991 24.798472020228232 25.79911169580409 24.771497021887768 30 24.326379375893886 25.903451230772017 25.856320417116752 23.913848976217345 31 25.618946466395908 25.22418818531281 23.928694277317465 25.228171070973815 32 23.975493183834313 25.340838457778396 24.535299832839495 26.1483685255478 33 23.96327296646531 24.722827366045298 25.502296193930324 25.81160347355907 34 25.11740460687108 24.825477191944916 25.508873989946228 24.548244211237773 35 25.209433404341347 25.024742168500204 26.109625910481626 23.656198516676824 36 24.30589165344067 25.53397823896107 25.26760767369304 24.89252243390522 37 24.599146696920503 25.201045205752255 25.6852072005745 24.514600896752743 38 24.334224453711023 24.316391988365147 26.375121447839284 24.974262110084545 39 25.025526676281917 23.50315915249021 25.715984044318656 25.75533012690922 40 24.713835699931806 24.32864237911037 26.637629820951187 24.319892100006637 41 23.43044131580059 24.515415577910673 27.10054975891472 24.95359334737401 42 24.999185318842066 24.638221219125093 26.726943014561673 23.635650447471168 43 24.017796257294414 23.143522681326907 27.06820389960714 25.770477161771538 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 169.0 1 209.0 2 249.0 3 560.5 4 872.0 5 872.0 6 1529.0 7 2186.0 8 2195.0 9 2204.0 10 2953.5 11 3703.0 12 3703.0 13 6881.0 14 10059.0 15 16758.0 16 23457.0 17 20957.5 18 18458.0 19 18458.0 20 20552.5 21 22647.0 22 20162.5 23 17678.0 24 20791.5 25 23905.0 26 23905.0 27 28668.0 28 33431.0 29 38351.0 30 43271.0 31 49813.5 32 56356.0 33 56356.0 34 67614.5 35 78873.0 36 97589.0 37 116305.0 38 133565.5 39 150826.0 40 150826.0 41 166391.5 42 181957.0 43 191626.0 44 201295.0 45 223477.5 46 245660.0 47 245660.0 48 293523.0 49 341386.0 50 341153.0 51 340920.0 52 303671.5 53 266423.0 54 266423.0 55 256310.5 56 246198.0 57 239968.0 58 233738.0 59 220286.0 60 206834.0 61 206834.0 62 171683.0 63 136532.0 64 121033.0 65 105534.0 66 89383.0 67 73232.0 68 73232.0 69 61177.5 70 49123.0 71 42708.5 72 36294.0 73 26289.0 74 16284.0 75 16284.0 76 12764.0 77 9244.0 78 8325.0 79 7406.0 80 5983.0 81 4560.0 82 4560.0 83 3799.5 84 3039.0 85 2751.5 86 2464.0 87 1625.5 88 787.0 89 787.0 90 544.0 91 301.0 92 229.0 93 157.0 94 147.0 95 137.0 96 137.0 97 75.0 98 13.0 99 13.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3314180.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.555485080949246 #Duplication Level Percentage of deduplicated Percentage of total 1 82.20705572525806 37.44982300640757 2 9.160307783943853 8.346045291767151 3 2.99945416071593 4.099247678084571 4 1.5130077763358234 2.7570321272890723 5 0.915849156125168 2.0860976284130026 6 0.6040118253757775 1.6509631019773892 7 0.43366333822349 1.3829020614216394 8 0.3015495567448742 1.098978906676638 9 0.24687875944198537 1.012201347830636 >10 1.4184971671022593 11.543753137911034 >50 0.0886610354202967 2.808464975964663 >100 0.08116042896387238 7.985864152063302 >500 0.01648003336560607 5.31962028259688 >1k 0.012891639003592218 10.539008596087324 >5k 3.9871048464718196E-4 1.266325429161711 >10k+ 1.3290349488239401E-4 0.6536722763474175 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11434 0.3450023836967213 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 10159 0.30653132901652896 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 9208 0.2778364482315384 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 7126 0.21501547894200074 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6708 0.2024030076821416 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6342 0.1913595519857099 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 6247 0.18849308124483283 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 6200 0.18707493256250415 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 4634 0.13982342540236198 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGG 4414 0.13318528263401505 No Hit GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGG 4168 0.12576263208395438 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGG 4063 0.12259442758087974 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 3981 0.12012021073085952 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAAC 3940 0.11888310230584942 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC 3921 0.118309808157674 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCG 3905 0.11782703413815786 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG 3876 0.11695200622778486 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT 3738 0.11278808030945814 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAA 3736 0.11272773355701864 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGG 3683 0.11112854461737141 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGA 3593 0.10841294075759313 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAA 3561 0.10744739271856085 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3543 0.10690427194660519 No Hit GCGTTATTCCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAA 3428 0.10343433368133295 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 3353 0.10117133046485105 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.0173376219758733E-5 2 0.0 0.0 0.0 0.0 3.0173376219758733E-5 3 0.0 0.0 0.0 0.0 3.0173376219758733E-5 4 0.0 0.0 0.0 0.0 3.0173376219758733E-5 5 0.0 0.0 0.0 0.0 3.0173376219758733E-5 6 0.0 0.0 0.0 0.0 3.0173376219758733E-5 7 0.0 0.0 0.0 0.0 3.0173376219758733E-5 8 0.0 0.0 0.0 0.0 3.0173376219758733E-5 9 0.0 0.0 0.0 0.0 6.0346752439517466E-5 10 0.0 0.0 0.0 0.0 9.05201286592762E-5 11 0.0 0.0 0.0 3.0173376219758733E-5 9.05201286592762E-5 12 0.0 0.0 0.0 3.0173376219758733E-5 9.05201286592762E-5 13 0.0 0.0 0.0 3.0173376219758733E-5 9.05201286592762E-5 14 0.0 0.0 0.0 6.0346752439517466E-5 1.2069350487903493E-4 15 0.0 0.0 0.0 6.0346752439517466E-5 1.5086688109879366E-4 16 0.0 0.0 0.0 1.810402573185524E-4 2.1121363353831114E-4 17 0.0 0.0 0.0 4.224272670766223E-4 2.1121363353831114E-4 18 0.0 0.0 0.0 4.8277401951613973E-4 2.4138700975806987E-4 19 0.0 0.0 0.0 8.146811579334858E-4 2.4138700975806987E-4 20 0.0 0.0 0.0 0.0010862415439113144 2.4138700975806987E-4 21 0.0 0.0 0.0 0.0018405759494052828 2.4138700975806987E-4 22 0.0 0.0 0.0 0.003288898007953702 2.4138700975806987E-4 23 0.0 0.0 0.0 0.004918260323820673 2.715603859778286E-4 24 0.0 0.0 0.0 0.007603690807379201 2.715603859778286E-4 25 0.0 0.0 0.0 0.00905201286592762 2.715603859778286E-4 26 0.0 0.0 0.0 0.012009003735463975 2.715603859778286E-4 27 0.0 0.0 0.0 0.023716273708730366 2.715603859778286E-4 28 0.0 0.0 0.0 0.04658769288330748 2.715603859778286E-4 29 0.0 0.0 0.0 0.0759765613213525 2.715603859778286E-4 30 0.0 0.0 0.0 0.12473673729248261 2.715603859778286E-4 31 0.0 0.0 0.0 0.32517847552033985 3.017337621975873E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAAGACG 1605 0.0 18.903427 4 AAGACGG 1595 0.0 18.78997 5 CTTATAC 1355 0.0 17.612545 37 CGCAAGA 1785 0.0 16.893559 2 AGACGGA 1785 0.0 16.789917 6 GCGCAAG 1790 0.0 16.743017 1 ACGGACC 1755 0.0 16.655272 8 GACGGAC 1775 0.0 16.571833 7 CGGACCA 1815 0.0 16.104685 9 TAGTACT 165 9.767973E-10 15.69697 4 CGTTATA 95 7.066094E-5 15.578946 2 AGTACTA 155 7.223207E-9 15.516129 5 CGTTACG 290 0.0 15.310346 24 TCTTATA 2260 0.0 14.980088 37 TCGTTAC 325 0.0 14.8 23 GCAAGAC 2165 0.0 14.78291 3 GCGGGTA 765 0.0 14.751634 23 TAAGACT 420 0.0 14.535714 4 TCTAGAC 295 0.0 14.423729 3 TTACACT 335 0.0 14.358209 4 >>END_MODULE