##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727233.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3953523 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.174979885029124 31.0 31.0 33.0 30.0 34.0 2 31.38798003704544 31.0 31.0 34.0 30.0 34.0 3 31.531792024480445 31.0 31.0 34.0 30.0 34.0 4 35.35331829358271 37.0 35.0 37.0 33.0 37.0 5 35.17489312696549 37.0 35.0 37.0 32.0 37.0 6 35.18983372551519 37.0 35.0 37.0 32.0 37.0 7 35.07758497927039 37.0 35.0 37.0 32.0 37.0 8 35.109859990696904 37.0 35.0 37.0 32.0 37.0 9 36.63588273041538 39.0 35.0 39.0 32.0 39.0 10 36.37913754390704 38.0 35.0 39.0 32.0 39.0 11 36.54689500984312 38.0 35.0 39.0 32.0 39.0 12 36.41449638714635 38.0 35.0 39.0 32.0 39.0 13 36.4815168648317 38.0 35.0 39.0 32.0 39.0 14 37.44581857750669 39.0 36.0 41.0 32.0 41.0 15 37.447667561311775 39.0 36.0 41.0 32.0 41.0 16 37.396030831235834 39.0 36.0 41.0 32.0 41.0 17 37.430272696023266 39.0 36.0 41.0 32.0 41.0 18 37.38858228471164 39.0 36.0 41.0 32.0 41.0 19 37.421618642410834 39.0 36.0 41.0 32.0 41.0 20 37.35765569088633 39.0 36.0 41.0 31.0 41.0 21 37.264403925309146 39.0 36.0 41.0 31.0 41.0 22 37.19919221413408 39.0 36.0 40.0 31.0 41.0 23 37.08440320190372 39.0 36.0 40.0 31.0 41.0 24 36.951377037644654 39.0 36.0 40.0 31.0 41.0 25 36.81763657375966 39.0 35.0 40.0 30.0 41.0 26 36.56573921537829 38.0 35.0 40.0 30.0 41.0 27 36.37851177291747 38.0 35.0 40.0 30.0 41.0 28 36.14590202206993 38.0 35.0 40.0 29.0 41.0 29 36.05635353582109 38.0 35.0 40.0 29.0 41.0 30 35.92991010802264 38.0 34.0 40.0 29.0 41.0 31 35.96540225009441 38.0 35.0 40.0 29.0 41.0 32 35.89665166991567 38.0 34.0 40.0 29.0 41.0 33 35.808600582316075 38.0 34.0 40.0 29.0 41.0 34 35.82027624475689 38.0 34.0 40.0 29.0 41.0 35 35.57153885281558 38.0 34.0 40.0 27.0 41.0 36 35.48538961326392 38.0 34.0 40.0 27.0 41.0 37 35.35478154547223 38.0 34.0 40.0 26.0 41.0 38 35.209815144619114 38.0 34.0 40.0 26.0 41.0 39 35.07680137436914 38.0 33.0 40.0 25.0 41.0 40 34.816474825111676 38.0 33.0 40.0 24.0 41.0 41 34.677532165615325 38.0 33.0 40.0 24.0 41.0 42 34.38700748674031 38.0 33.0 40.0 23.0 41.0 43 33.99151288610184 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 1.0 14 10.0 15 23.0 16 80.0 17 167.0 18 319.0 19 734.0 20 1541.0 21 3111.0 22 5502.0 23 9935.0 24 16478.0 25 25321.0 26 37538.0 27 53439.0 28 73820.0 29 97458.0 30 124428.0 31 154199.0 32 186878.0 33 227733.0 34 277054.0 35 334083.0 36 412213.0 37 536721.0 38 672207.0 39 702527.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.240320089196395 19.16789152358542 13.487944802648169 24.103843584570015 2 17.657289460564666 23.82313192562684 34.377111249890284 24.142467363918207 3 20.452720269997165 25.47740331850858 30.394182606247643 23.67569380524661 4 14.815140825031245 15.9485603093747 33.47035036851942 35.76594849707463 5 13.975181123266514 39.02807698349042 32.36194654742112 14.63479534582194 6 33.545498533839314 34.63741073467892 16.30750598896225 15.50958474251952 7 27.28009929371854 32.616504317794536 21.534616087980265 18.568780300506663 8 28.610836461555934 33.159564267110625 20.08982874261766 18.139770528715783 9 28.37618498741502 13.416818366808538 20.085655249760784 38.12134139601566 10 17.38188951980297 28.098103893666483 31.31720746281228 23.20279912371826 11 34.85498882895078 23.597333315121727 20.433496908959427 21.11418094696806 12 21.290024112671155 27.10734198333992 29.201246584375507 22.40138731961342 13 30.051273256788946 19.847412042373346 25.555156755127012 24.5461579457107 14 22.86770558815517 21.68643005238619 26.43442317143469 29.011441188023944 15 25.52452584694714 27.961618030298546 23.56839709798071 22.9454590247736 16 22.975685230615834 26.703449050378612 26.309395443001087 24.011470276004466 17 22.7983497250427 27.102839669833717 26.6557194684336 23.443091136689986 18 22.330311471565995 25.26038168995096 28.962775731923145 23.446531106559895 19 22.865960309324116 26.439279599486333 29.369400405663505 21.32535968552605 20 22.599817934535857 25.3891276211116 28.931386006860212 23.07966843749233 21 23.49469068473865 26.26788815949724 28.982049680753093 21.255371475011025 22 23.926331021724167 25.558596724996917 27.66497121681093 22.850101036467983 23 22.06477615028419 26.366812587153284 28.59439542908945 22.974015833473082 24 21.926317363020274 26.996352367243087 28.568469185584604 22.508861084152034 25 22.72178510154108 26.04236778184925 27.720592494339858 23.515254622269808 26 22.1954444175486 27.03717671555218 28.584960805843295 22.182418061055927 27 23.18071755242097 26.86237059958928 27.619113383177485 22.33779846481227 28 21.75128360199245 27.784156055244903 28.392018966375055 22.07254137638759 29 21.960312359381746 27.51540840915811 28.903613308939903 21.620665922520242 30 22.447498092207887 27.72185718914497 28.334500646638457 21.49614407200869 31 22.38722273779614 27.559166849415067 27.961061564584295 22.092548848204498 32 21.488935311619535 27.77469613810265 27.894538617835284 22.841829932442533 33 21.126752013330897 27.230826784111283 28.583746698830385 23.058674503727435 34 22.126037966643928 27.475317583835984 28.725771925444725 21.672872524075363 35 21.961981756524498 27.231889127747582 28.779622630246493 22.02650648548143 36 21.09118879541108 27.62966093785214 28.682443481421505 22.596706785315273 37 21.305731622150674 27.297729139301836 29.06101722438443 22.335522014163065 38 21.291592334229495 26.524520029351038 29.127160762691908 23.05672687372756 39 21.034682231518573 26.396962911307202 29.673407742916886 22.894947114257334 40 21.501632847462883 26.4311602588375 29.87512656433262 22.192080329367 41 20.26572249611296 26.89813616867791 30.311926856123005 22.524214479086123 42 20.771625712054792 27.00146173425575 30.039334537828665 22.18757801586079 43 19.919752585225886 26.259945876121122 29.864705479138483 23.955596059514512 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2846.0 1 2775.0 2 2704.0 3 4856.5 4 7009.0 5 7009.0 6 10332.5 7 13656.0 8 13126.0 9 12596.0 10 17325.0 11 22054.0 12 22054.0 13 38977.5 14 55901.0 15 83909.5 16 111918.0 17 95457.5 18 78997.0 19 78997.0 20 79404.5 21 79812.0 22 61265.0 23 42718.0 24 48372.0 25 54026.0 26 54026.0 27 58990.0 28 63954.0 29 68675.5 30 73397.0 31 78033.0 32 82669.0 33 82669.0 34 92455.5 35 102242.0 36 119106.5 37 135971.0 38 153663.0 39 171355.0 40 171355.0 41 189294.5 42 207234.0 43 221449.5 44 235665.0 45 262001.5 46 288338.0 47 288338.0 48 315081.0 49 341824.0 50 339691.0 51 337558.0 52 319606.5 53 301655.0 54 301655.0 55 286215.5 56 270776.0 57 255766.5 58 240757.0 59 220362.5 60 199968.0 61 199968.0 62 168310.5 63 136653.0 64 119399.0 65 102145.0 66 85071.0 67 67997.0 68 67997.0 69 55899.5 70 43802.0 71 36600.0 72 29398.0 73 21702.0 74 14006.0 75 14006.0 76 10994.0 77 7982.0 78 6938.0 79 5894.0 80 4644.5 81 3395.0 82 3395.0 83 2787.0 84 2179.0 85 1891.5 86 1604.0 87 1025.0 88 446.0 89 446.0 90 337.5 91 229.0 92 160.0 93 91.0 94 90.5 95 90.0 96 90.0 97 48.5 98 7.0 99 6.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3953523.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.88780798333807 #Duplication Level Percentage of deduplicated Percentage of total 1 80.7443225709812 37.051799698818954 2 9.589783200222682 8.801082601873194 3 3.3225912497384136 4.573992878253468 4 1.658295018186203 3.0438209349701837 5 1.0147283899850017 2.328183075743677 6 0.6836447713690424 1.8822575998437407 7 0.46784201729078423 1.5027771259183924 8 0.374795559675906 1.375883734033256 9 0.26815374379679185 1.1074488754824374 >10 1.657896291873 13.912333744052408 >50 0.11563854471475557 3.6641397399386997 >100 0.08299546086554027 7.94501430215747 >500 0.0127832231629465 4.086478522304626 >1k 0.006142587739710578 4.843438826466272 >5k 1.6601588485704266E-4 0.48766029771020525 >10k+ 2.2135451314272354E-4 3.393688042433085 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 50812 1.2852334487493813 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 32575 0.8239486655319825 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 30866 0.7807213970931749 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19390 0.4904486454233351 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 8778 0.22202981998587085 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5312 0.13436117609534584 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5114 0.1293529846670931 No Hit GTACATGGGAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAA 4827 0.12209363648573691 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4759 0.12037365155078142 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4191 0.10600671856468269 No Hit GAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4053 0.10251616090256715 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 4015 0.10155499285068026 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 2.5293896102286493E-5 7 0.0 0.0 0.0 0.0 2.5293896102286493E-5 8 0.0 0.0 0.0 0.0 5.058779220457299E-5 9 0.0 0.0 0.0 0.0 5.058779220457299E-5 10 0.0 0.0 0.0 0.0 5.058779220457299E-5 11 0.0 0.0 0.0 7.588168830685948E-5 7.588168830685948E-5 12 0.0 0.0 0.0 1.0117558440914597E-4 7.588168830685948E-5 13 0.0 0.0 0.0 1.2646948051143247E-4 7.588168830685948E-5 14 0.0 0.0 0.0 4.047023376365839E-4 1.2646948051143247E-4 15 0.0 0.0 0.0 7.588168830685947E-4 1.5176337661371896E-4 16 0.0 0.0 0.0 0.0014164581817280436 2.0235116881829195E-4 17 0.0 0.0 0.0 0.002402920129717217 2.0235116881829195E-4 18 0.0 0.0 0.0 0.002782328571251514 2.782328571251514E-4 19 0.0 0.0 0.0 0.0037687905192406875 2.782328571251514E-4 20 0.0 0.0 0.0 0.005084073116559585 3.288206493297244E-4 21 0.0 0.0 0.0 0.007031703116435645 3.541145454320109E-4 22 0.0 0.0 0.0 0.010901669220085479 3.541145454320109E-4 23 0.0 0.0 0.0 0.017629845583293686 3.541145454320109E-4 24 0.0 0.0 0.0 0.0245350792192179 3.541145454320109E-4 25 0.0 0.0 0.0 0.028076224673538007 3.541145454320109E-4 26 0.0 0.0 0.0 0.035386160647098805 3.794084415342974E-4 27 0.0 0.0 0.0 0.0681670499956621 3.794084415342974E-4 28 0.0 0.0 0.0 0.13342530193956126 3.794084415342974E-4 29 0.0 0.0 0.0 0.2226368734923257 3.794084415342974E-4 30 0.0 0.0 0.0 0.37606964724879555 3.794084415342974E-4 31 0.0 0.0 0.0 0.8198257604673098 4.047023376365839E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3495 0.0 17.891273 37 TATACCG 170 5.456968E-12 17.411764 5 ATACCGA 160 6.311893E-10 16.1875 6 AAGACGG 1045 0.0 15.7559805 5 GGAGTGT 1680 0.0 15.747025 6 GGACCGT 170 1.4897523E-9 15.235293 6 GAACAGT 3110 0.0 15.168811 1 CAAGACG 1125 0.0 14.964445 4 TAGTACG 75 0.0041067614 14.8 4 TCTTATA 5700 0.0 14.767544 37 TCGTTAC 750 0.0 14.553334 23 TGGAGTG 1900 0.0 14.5078945 5 ACCGTCG 945 0.0 14.486773 8 AACAGTG 3160 0.0 14.343354 2 CGTCGTA 915 0.0 14.153005 10 TAGTACC 275 0.0 14.127274 4 ATACCGT 1025 0.0 14.078049 6 CGAGCCG 870 0.0 13.821838 15 ACGAACG 790 0.0 13.816456 15 CGCATCG 745 0.0 13.657718 13 >>END_MODULE