##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727232.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5769319 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.1453072711008 31.0 31.0 33.0 30.0 34.0 2 31.34304412704515 31.0 31.0 34.0 30.0 34.0 3 31.50503794295306 31.0 31.0 34.0 30.0 34.0 4 35.321406217960906 37.0 35.0 37.0 33.0 37.0 5 35.143117757919086 37.0 35.0 37.0 32.0 37.0 6 35.17765216310625 37.0 35.0 37.0 32.0 37.0 7 35.05677723835343 37.0 35.0 37.0 32.0 37.0 8 35.094475275158125 37.0 35.0 37.0 32.0 37.0 9 36.628160966658285 39.0 35.0 39.0 32.0 39.0 10 36.37597609007233 38.0 35.0 39.0 32.0 39.0 11 36.53049519362684 38.0 35.0 39.0 32.0 39.0 12 36.40180028180102 38.0 35.0 39.0 32.0 39.0 13 36.461033962587265 38.0 35.0 39.0 32.0 39.0 14 37.42114849256905 39.0 36.0 41.0 32.0 41.0 15 37.41832164246768 39.0 36.0 41.0 32.0 41.0 16 37.35622644544356 39.0 36.0 41.0 32.0 41.0 17 37.41241418614571 39.0 36.0 41.0 32.0 41.0 18 37.360154465371046 39.0 36.0 41.0 32.0 41.0 19 37.38993232996823 39.0 36.0 41.0 32.0 41.0 20 37.34361490498272 39.0 36.0 41.0 31.0 41.0 21 37.24553625826549 39.0 36.0 41.0 31.0 41.0 22 37.19170668149915 39.0 36.0 40.0 31.0 41.0 23 37.07822465701758 39.0 36.0 40.0 31.0 41.0 24 36.95160243349345 39.0 36.0 40.0 31.0 41.0 25 36.82431982006889 39.0 35.0 40.0 30.0 41.0 26 36.5724547385922 38.0 35.0 40.0 30.0 41.0 27 36.38441209439104 38.0 35.0 40.0 30.0 41.0 28 36.1668831278007 38.0 35.0 40.0 29.0 41.0 29 36.08192734705777 38.0 35.0 40.0 29.0 41.0 30 35.937452929886526 38.0 35.0 40.0 29.0 41.0 31 35.97126073285253 38.0 35.0 40.0 30.0 41.0 32 35.84984206974861 38.0 34.0 40.0 29.0 41.0 33 35.78410224846294 38.0 34.0 40.0 29.0 41.0 34 35.78699219093276 38.0 34.0 40.0 29.0 41.0 35 35.53785204111612 38.0 34.0 40.0 27.0 41.0 36 35.45962443747693 38.0 34.0 40.0 27.0 41.0 37 35.313812774089975 38.0 34.0 40.0 26.0 41.0 38 35.172249792393174 38.0 34.0 40.0 25.0 41.0 39 35.05088607511563 38.0 33.0 40.0 25.0 41.0 40 34.79639832708158 38.0 33.0 40.0 24.0 41.0 41 34.66216324665008 38.0 33.0 40.0 24.0 41.0 42 34.37175271466182 38.0 33.0 40.0 23.0 41.0 43 33.95880830995824 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 10.0 14 3.0 15 41.0 16 110.0 17 261.0 18 555.0 19 1152.0 20 2426.0 21 4592.0 22 8584.0 23 14819.0 24 23859.0 25 37187.0 26 55406.0 27 79012.0 28 109101.0 29 143457.0 30 181741.0 31 225229.0 32 273781.0 33 330472.0 34 403742.0 35 486430.0 36 604073.0 37 794134.0 38 993018.0 39 996123.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.84536545821093 18.932910452689477 13.08603320426553 24.13569088483407 2 17.10505174007539 24.879816838001155 33.56749730774117 24.447634114182282 3 20.58998644380732 26.410708092237577 29.90418799861821 23.095117465336898 4 14.849291571500899 16.313970505011078 33.3164278140973 35.52031010939073 5 13.785405175203522 39.1318282105739 32.595042846478066 14.487723767744512 6 33.46188692287599 34.481972655698186 16.51295412855486 15.543186292870962 7 26.992596526557122 32.24496686697338 22.172131580867692 18.590305025601808 8 28.91446980137517 32.50624553781824 20.811087062441857 17.76819759836473 9 28.408968198846345 13.178071796688656 20.004388732881644 38.408571271583355 10 17.273997156336822 28.091201058565147 31.82760391651077 22.807197868587263 11 34.64140221748875 23.526502868016138 20.467025657620944 21.365069256874165 12 21.371326494513475 27.53179361376967 29.427684619276555 21.6691952724403 13 30.364432959938597 19.609125444441535 25.42788845615921 24.598553139460655 14 22.728644403264926 21.701122784162223 26.628220765743755 28.942012046829095 15 25.792246883904323 27.46701993770842 23.78991350625611 22.950819672131146 16 22.757087968268007 26.3690393961575 26.90190991345772 23.971962722116768 17 23.135052854591677 27.075933918717272 27.021768080426824 22.76724514626423 18 22.92097212859958 24.39436959544099 29.402447671900273 23.282210604059163 19 22.644301693146108 27.06863669698278 29.422796694029223 20.864264915841886 20 22.61310217029081 25.42700446967831 29.27615893660933 22.68373442342155 21 23.16169378049645 26.674881385480674 28.85628269125004 21.307142142772832 22 23.354385500264417 26.33924385183069 27.30700105159725 22.999369596307638 23 21.43100424850836 26.543947387897948 28.48133375880238 23.54371460479131 24 21.624527955552466 28.165057262390935 28.17862905483299 22.031785727223614 25 22.45774587953968 26.26257969094793 27.368949437533267 23.910724991979123 26 22.1082938904921 27.19166681544217 28.598227971100226 22.1018113229655 27 23.055563403583683 26.862841177615593 27.398606317314055 22.682989101486676 28 21.513249657368576 27.78866968527828 28.78975837529525 21.9083222820579 29 22.05220408162558 27.268348309393186 28.984044737342487 21.69540287163875 30 21.756640601776397 28.414428115346023 28.794455636791795 21.034475646085784 31 22.601281017742302 27.49995276738901 27.43831637668155 22.46044983818714 32 20.645278931534207 28.161139988965765 28.17916637994883 23.014414699551196 33 20.963808726818538 27.577414249411415 28.72117142421835 22.737605599551696 34 21.54703180739356 27.650022472322988 28.767554714863223 22.035391005420223 35 21.547725130123677 27.922792967419554 29.163043333190625 21.366438569266148 36 21.277814591288852 27.902634609041378 28.430773198708547 22.388777600961223 37 21.132372815578407 27.61161239307447 28.961321084862874 22.294693706484246 38 21.240565827613274 27.02138675292526 29.189146933979554 22.54890048548191 39 21.33204976185231 26.133517664736516 29.23982882555116 23.294603747860016 40 21.227618025628328 26.878995597227334 29.77113936670862 22.122247010435718 41 20.150402499844436 26.96791423736493 30.242408159437883 22.63927510335275 42 21.09245475939188 27.250859243525973 29.78523115119826 21.87145484588389 43 20.150870492687265 26.033471194780528 30.109186196845762 23.706472115686445 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2528.0 1 2565.0 2 2602.0 3 6492.0 4 10382.0 5 10382.0 6 16149.0 7 21916.0 8 21261.0 9 20606.0 10 26735.0 11 32864.0 12 32864.0 13 56150.0 14 79436.0 15 122735.5 16 166035.0 17 144715.5 18 123396.0 19 123396.0 20 124392.0 21 125388.0 22 95156.0 23 64924.0 24 70244.5 25 75565.0 26 75565.0 27 82662.5 28 89760.0 29 97062.0 30 104364.0 31 110639.0 32 116914.0 33 116914.0 34 129858.5 35 142803.0 36 167780.5 37 192758.0 38 220026.5 39 247295.0 40 247295.0 41 271209.5 42 295124.0 43 316179.5 44 337235.0 45 376336.0 46 415437.0 47 415437.0 48 491794.0 49 568151.0 50 565117.5 51 562084.0 52 487864.5 53 413645.0 54 413645.0 55 391346.0 56 369047.0 57 350629.0 58 332211.0 59 305672.5 60 279134.0 61 279134.0 62 233577.5 63 188021.0 64 162907.0 65 137793.0 66 116105.5 67 94418.0 68 94418.0 69 78057.0 70 61696.0 71 52412.0 72 43128.0 73 31577.0 74 20026.0 75 20026.0 76 15784.0 77 11542.0 78 10112.5 79 8683.0 80 6865.0 81 5047.0 82 5047.0 83 4228.5 84 3410.0 85 3016.5 86 2623.0 87 1680.5 88 738.0 89 738.0 90 520.5 91 303.0 92 222.0 93 141.0 94 137.5 95 134.0 96 134.0 97 69.5 98 5.0 99 6.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5769319.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.88732026902854 #Duplication Level Percentage of deduplicated Percentage of total 1 81.82106982472445 35.90907496152229 2 9.359643276887319 8.215393241932272 3 3.099906263515609 4.081397369726314 4 1.5348262631377811 2.694376470705764 5 0.8619999593315602 1.8915434143536878 6 0.5967918500411259 1.5714957034020574 7 0.4169682754153541 1.2809734171624703 8 0.3257384655860135 1.1436630690492249 9 0.25465262391887117 1.005841913694838 >10 1.498930220466126 12.301927743166274 >50 0.12016107605524007 3.63461884889022 >100 0.08470544354807241 7.606806320299089 >500 0.01369230564685886 4.2095301656927635 >1k 0.010080707412187771 8.440202767578436 >5k 5.556295424038071E-4 1.7772028994451234 >10k+ 2.7781477120190353E-4 4.235951693379169 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 76089 1.3188558302981686 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 48719 0.8444497522151228 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 43890 0.7607483656216617 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27053 0.46891149544686295 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 16578 0.2873476054972866 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 16092 0.27892373432635637 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 14774 0.2560787503689777 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 9706 0.16823476046306332 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 9189 0.15927356417629188 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8636 0.14968837743241445 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGT 8109 0.14055385046311358 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 8001 0.13868187909179575 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7514 0.1302406748526126 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCTGT 7343 0.12727672018135935 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6699 0.11611422422646417 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 6656 0.11536890229158762 No Hit GAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6327 0.10966632283636941 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 6161 0.10678903350638091 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 5964 0.10337441906055117 No Hit GTACATGGGAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAA 5902 0.10229976882886872 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 5826 0.10098245564164506 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.199920475882855E-5 2 0.0 0.0 0.0 1.7333068252942853E-5 5.199920475882855E-5 3 0.0 0.0 0.0 1.7333068252942853E-5 5.199920475882855E-5 4 0.0 0.0 0.0 1.7333068252942853E-5 5.199920475882855E-5 5 0.0 0.0 0.0 1.7333068252942853E-5 5.199920475882855E-5 6 0.0 0.0 0.0 1.7333068252942853E-5 1.039984095176571E-4 7 0.0 0.0 0.0 1.7333068252942853E-5 1.039984095176571E-4 8 0.0 0.0 0.0 1.7333068252942853E-5 1.039984095176571E-4 9 0.0 0.0 0.0 1.7333068252942853E-5 1.3866454602354283E-4 10 0.0 0.0 0.0 3.4666136505885707E-5 1.3866454602354283E-4 11 0.0 0.0 0.0 5.199920475882855E-5 1.5599761427648567E-4 12 0.0 0.0 0.0 6.933227301177141E-5 1.5599761427648567E-4 13 0.0 0.0 0.0 1.039984095176571E-4 1.5599761427648567E-4 14 0.0 0.0 0.0 2.4266295554119992E-4 2.079968190353142E-4 15 0.0 0.0 0.0 6.066573888529999E-4 2.599960237941428E-4 16 0.0 0.0 0.0 0.001889304439570771 3.293282968059142E-4 17 0.0 0.0 0.0 0.003050620012517942 3.46661365058857E-4 18 0.0 0.0 0.0 0.003778608879141542 3.639944333117999E-4 19 0.0 0.0 0.0 0.005737245591724084 3.639944333117999E-4 20 0.0 0.0 0.0 0.007227889461477169 3.639944333117999E-4 21 0.0 0.0 0.0 0.012046482435795283 3.639944333117999E-4 22 1.7333068252942853E-5 0.0 0.0 0.01797439177830174 3.639944333117999E-4 23 1.7333068252942853E-5 0.0 0.0 0.026900921928567304 3.8132750156474274E-4 24 1.7333068252942853E-5 0.0 0.0 0.039051402773880244 3.8132750156474274E-4 25 1.7333068252942853E-5 0.0 0.0 0.0438873288164513 3.8132750156474274E-4 26 1.7333068252942853E-5 0.0 0.0 0.056020476593511295 4.333267063235713E-4 27 1.7333068252942853E-5 0.0 0.0 0.09794916869738006 4.333267063235713E-4 28 3.4666136505885707E-5 0.0 0.0 0.17606930731339349 4.333267063235713E-4 29 3.4666136505885707E-5 0.0 0.0 0.27173051100138507 4.333267063235713E-4 30 3.4666136505885707E-5 0.0 0.0 0.4245388407193293 4.333267063235713E-4 31 3.4666136505885707E-5 0.0 0.0 0.8425604477755521 4.5065977457651416E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1570 0.0 17.085987 5 CAAGACG 1665 0.0 16.777779 4 CTTATAC 5520 0.0 16.723732 37 TCGTTAC 780 0.0 16.365385 23 GAACAGT 5245 0.0 15.448998 1 ACGGACC 1690 0.0 15.215977 8 GACGGAC 1685 0.0 15.151335 7 CGGACCA 1795 0.0 14.325906 9 AACAGTG 5650 0.0 14.21062 2 AGACGGA 1950 0.0 13.661539 6 GGAGTGT 1585 0.0 13.656153 6 CTAGCGG 1020 0.0 13.6029415 29 TCTAGCG 1010 0.0 13.554455 28 CGCAAGA 1980 0.0 13.547978 2 ACAGTGG 6110 0.0 13.534369 3 CGCTTCG 1215 0.0 13.399177 32 CGAACGA 985 0.0 13.335025 16 ACGAACG 975 0.0 13.282052 15 GGCGTCA 815 0.0 13.165644 12 AGAGCGA 2010 0.0 13.069652 15 >>END_MODULE