##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727230.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1649484 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16826898593742 31.0 31.0 33.0 30.0 34.0 2 31.38513923142025 31.0 31.0 34.0 30.0 34.0 3 31.546661865165106 31.0 31.0 34.0 30.0 34.0 4 35.354511471466225 37.0 35.0 37.0 33.0 37.0 5 35.17785501405288 37.0 35.0 37.0 32.0 37.0 6 35.19428015064105 37.0 35.0 37.0 32.0 37.0 7 35.07901501317988 37.0 35.0 37.0 32.0 37.0 8 35.10449813396189 37.0 35.0 37.0 32.0 37.0 9 36.65798455759498 39.0 35.0 39.0 32.0 39.0 10 36.37953687334949 38.0 35.0 39.0 32.0 39.0 11 36.5520950794309 38.0 35.0 39.0 32.0 39.0 12 36.417369916895225 38.0 35.0 39.0 32.0 39.0 13 36.48852125876941 38.0 35.0 39.0 32.0 39.0 14 37.46783115204512 39.0 36.0 41.0 32.0 41.0 15 37.46463803225736 39.0 36.0 41.0 32.0 41.0 16 37.40080413026134 39.0 36.0 41.0 32.0 41.0 17 37.42698989502171 39.0 36.0 41.0 32.0 41.0 18 37.37147010822778 39.0 36.0 41.0 32.0 41.0 19 37.39980078618525 39.0 36.0 41.0 32.0 41.0 20 37.32332232382976 39.0 36.0 41.0 31.0 41.0 21 37.224573866736506 39.0 36.0 41.0 31.0 41.0 22 37.16947178632833 39.0 36.0 40.0 31.0 41.0 23 37.047484546682476 39.0 36.0 40.0 31.0 41.0 24 36.91111523361245 39.0 36.0 40.0 31.0 41.0 25 36.77794934658354 39.0 35.0 40.0 30.0 41.0 26 36.529387978301095 38.0 35.0 40.0 30.0 41.0 27 36.34436466191851 38.0 35.0 40.0 30.0 41.0 28 36.08877442885169 38.0 35.0 40.0 29.0 41.0 29 36.01640634283206 38.0 35.0 40.0 29.0 41.0 30 35.88530291897345 38.0 34.0 40.0 29.0 41.0 31 35.94324285655393 38.0 34.0 40.0 29.0 41.0 32 35.849143125971516 38.0 34.0 40.0 29.0 41.0 33 35.78860176879557 38.0 34.0 40.0 29.0 41.0 34 35.79638238382427 38.0 34.0 40.0 28.0 41.0 35 35.5513396916854 38.0 34.0 40.0 27.0 41.0 36 35.47142803446411 38.0 34.0 40.0 27.0 41.0 37 35.356127734491515 38.0 34.0 40.0 26.0 41.0 38 35.21360437567142 38.0 34.0 40.0 26.0 41.0 39 35.10253873332509 38.0 33.0 40.0 25.0 41.0 40 34.872748083643124 38.0 33.0 40.0 24.0 41.0 41 34.74101658458039 38.0 33.0 40.0 24.0 41.0 42 34.47751175519132 38.0 33.0 40.0 23.0 41.0 43 34.07904775069052 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 1.0 14 4.0 15 7.0 16 37.0 17 82.0 18 149.0 19 306.0 20 655.0 21 1297.0 22 2389.0 23 4114.0 24 6997.0 25 10531.0 26 15811.0 27 22634.0 28 31111.0 29 40982.0 30 51805.0 31 64059.0 32 78095.0 33 94305.0 34 115614.0 35 139263.0 36 171482.0 37 223116.0 38 283083.0 39 291554.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.64631606005272 18.964415538435052 12.80121541039501 24.58805299111722 2 17.46867505231939 24.175924107175334 33.99560104857034 24.359799791934933 3 20.17618843226124 26.108225360173243 29.944879732085912 23.770706475479606 4 14.684410397433378 15.871327033181284 33.945949157433475 35.49831341195186 5 13.991527047246292 38.663060690494724 32.78322190454712 14.562190357711865 6 33.63124468015452 34.74456254198282 16.461208474892754 15.162984302969898 7 27.4181501608988 32.33156550775879 22.123342815086414 18.126941516255993 8 28.346137337494635 32.95570008560253 20.85900802917761 17.83915454772523 9 28.716071207723143 13.335928084176626 19.86275708039605 38.08524362770418 10 17.140451195646637 27.25822135892194 32.09264230510875 23.508685140322672 11 35.274607089247304 23.212713794131982 20.7794680033271 20.733211113293613 12 21.408816332865307 26.662338040259865 29.47242895353941 22.45641667333542 13 29.772644051109314 19.515193842438 25.639412082808928 25.07275002364376 14 22.672787368655893 21.535946999182777 26.259484784332553 29.531780847828777 15 25.687366473394103 27.71939588380366 23.381372598946097 23.21186504385614 16 23.198042539363826 26.57521988694646 26.19958726486586 24.02715030882385 17 23.197254414107686 26.831481845231597 26.343450436621392 23.627813304039325 18 23.033445610869823 25.070143147796525 28.57996803848961 23.31644320284404 19 23.359123216715044 26.61256489908359 28.577482412681782 21.45082947151958 20 22.862786180405507 25.28554384280175 28.29915294722471 23.552517029568033 21 23.77398022654357 26.599288019768608 28.233496050886213 21.3932357028016 22 24.03472843628674 25.672695218625947 26.781405578956814 23.511170766130498 23 21.840223973072792 26.34569356235041 28.081569751510173 23.73251271306663 24 22.01870403107881 27.229181974484142 27.89799719184909 22.854116802587964 25 22.954754335295156 25.959027186683837 26.97049501541088 24.115723462610124 26 22.463267300561874 27.01372065445921 28.01942910631446 22.503582938664454 27 23.697168326579707 26.7055636793082 26.833421845862098 22.763846148249996 28 21.940194630563255 27.779475278329464 27.739947765483024 22.540382325624257 29 22.36717664433241 27.348795138358422 28.309337950534836 21.974690266774335 30 22.792461157549877 27.679443995819298 27.80299778597428 21.725097060656545 31 22.86745430692265 27.255371982995896 27.182258209233918 22.694915500847536 32 21.59820889441789 27.70545212927194 27.193291962819888 23.50304701349028 33 21.344250686881473 26.871191233137147 28.044103489333633 23.74045459064774 34 22.369965395238754 27.20669009217428 28.341347960938084 22.08199655164888 35 22.46435855091653 27.096170681255472 28.356019215706247 22.083451552121755 36 21.6525895370916 27.45852642402109 28.073567248909352 22.815316789977956 37 21.736918939498658 27.10872006033402 28.518373018471234 22.635987981696093 38 21.882115861687655 26.37091357054691 28.65932618928101 23.087644378484423 39 21.728431436740216 26.002737825889792 28.84144374846922 23.42738698890077 40 22.16123345240087 26.273004163726355 29.147539472950328 22.41822291092245 41 20.647972335591007 26.6224467772952 29.7045621539827 23.025018733131088 42 21.56898763492098 26.80789871256708 29.310135775794127 22.31297787671781 43 20.50101728783062 25.808434637741257 29.311227026148785 24.37932104827934 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 854.0 1 1026.5 2 1199.0 3 2284.0 4 3369.0 5 3369.0 6 4916.5 7 6464.0 8 6089.5 9 5715.0 10 7306.5 11 8898.0 12 8898.0 13 14553.0 14 20208.0 15 29540.5 16 38873.0 17 34305.0 18 29737.0 19 29737.0 20 30136.0 21 30535.0 22 23604.0 23 16673.0 24 18068.0 25 19463.0 26 19463.0 27 21561.0 28 23659.0 29 25726.5 30 27794.0 31 29810.5 32 31827.0 33 31827.0 34 36314.0 35 40801.0 36 48791.0 37 56781.0 38 65722.5 39 74664.0 40 74664.0 41 81221.5 42 87779.0 43 93381.0 44 98983.0 45 110450.0 46 121917.0 47 121917.0 48 137706.5 49 153496.0 50 153662.5 51 153829.0 52 139721.0 53 125613.0 54 125613.0 55 118424.5 56 111236.0 57 106230.5 58 101225.0 59 92733.5 60 84242.0 61 84242.0 62 69764.5 63 55287.0 64 48313.0 65 41339.0 66 34803.0 67 28267.0 68 28267.0 69 23527.0 70 18787.0 71 16032.0 72 13277.0 73 9817.5 74 6358.0 75 6358.0 76 4943.5 77 3529.0 78 3092.5 79 2656.0 80 2160.5 81 1665.0 82 1665.0 83 1398.0 84 1131.0 85 995.5 86 860.0 87 566.0 88 272.0 89 272.0 90 192.0 91 112.0 92 79.0 93 46.0 94 54.5 95 63.0 96 63.0 97 32.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1649484.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.01515082197344 #Duplication Level Percentage of deduplicated Percentage of total 1 84.23213089396255 43.8134699250567 2 8.261429387032518 8.594389911431598 3 2.7395161490945057 4.2748903702314776 4 1.3619805606855586 2.8337449712262113 5 0.8150801096148069 2.1198257416802413 6 0.5159873867748227 1.6103497047197008 7 0.36120312730164156 1.315162460077435 8 0.2641255917577042 1.0990825992975974 9 0.195099007730864 0.913329388110443 >10 1.0451345691349114 9.876130441124484 >50 0.0982229546964719 3.5912512970560364 >100 0.09545073814443679 10.509661332592247 >500 0.009837760174638558 3.4480290115757803 >1k 0.004333299124543174 3.2870223036095823 >5k 2.3423238511044182E-4 1.0013727830300292 >10k+ 2.3423238511044182E-4 1.7122877591804393 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16845 1.0212284568992485 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11263 0.682819596916369 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9820 0.5953376934847504 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6618 0.40121638039532365 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 3526 0.21376381947324133 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2520 0.15277504965189112 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 2477 0.15016817380465647 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 2433 0.1475006729377187 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 2145 0.13004066726321686 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1781 0.10797316009127703 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1699 0.10300190847562025 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.06250197031314E-5 2 0.0 0.0 0.0 0.0 6.06250197031314E-5 3 0.0 0.0 0.0 0.0 6.06250197031314E-5 4 0.0 0.0 0.0 0.0 6.06250197031314E-5 5 0.0 0.0 0.0 0.0 6.06250197031314E-5 6 0.0 0.0 0.0 0.0 1.212500394062628E-4 7 0.0 0.0 0.0 6.06250197031314E-5 1.212500394062628E-4 8 0.0 0.0 0.0 6.06250197031314E-5 1.212500394062628E-4 9 0.0 0.0 0.0 6.06250197031314E-5 1.818750591093942E-4 10 0.0 0.0 0.0 1.212500394062628E-4 1.818750591093942E-4 11 0.0 0.0 0.0 3.637501182187884E-4 1.818750591093942E-4 12 0.0 0.0 0.0 6.668752167344454E-4 1.818750591093942E-4 13 0.0 0.0 0.0 7.881252561407082E-4 1.818750591093942E-4 14 0.0 0.0 0.0 0.0012731254137657595 2.425000788125256E-4 15 0.0 0.0 0.0 0.0017581255713908107 3.03125098515657E-4 16 0.0 0.0 0.0 0.003637501182187884 3.03125098515657E-4 17 0.0 0.0 0.0 0.006305002049125666 3.03125098515657E-4 18 0.0 0.0 0.0 0.007396252403782031 3.03125098515657E-4 19 0.0 0.0 0.0 0.010063753270719813 3.03125098515657E-4 20 0.0 0.0 0.0 0.012428129039141938 3.03125098515657E-4 21 0.0 0.0 0.0 0.018248130930642554 3.03125098515657E-4 22 0.0 0.0 0.0 0.027463133925518527 3.03125098515657E-4 23 0.0 0.0 0.0 0.03964876288584794 3.03125098515657E-4 24 0.0 0.0 0.0 0.0575331436982717 3.03125098515657E-4 25 0.0 0.0 0.0 0.06456564598383495 3.03125098515657E-4 26 0.0 0.0 0.0 0.07941877581110214 3.637501182187884E-4 27 0.0 0.0 0.0 0.14022567057334293 3.637501182187884E-4 28 0.0 0.0 0.0 0.23680132696043127 3.637501182187884E-4 29 0.0 0.0 0.0 0.34950323858855253 3.637501182187884E-4 30 0.0 0.0 0.0 0.5187682935996955 3.637501182187884E-4 31 0.0 0.0 0.0 0.9550865604031321 3.637501182187884E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 505 0.0 19.415842 5 CAAGACG 540 0.0 18.842592 4 ACCGTCG 390 0.0 18.02564 8 CGTCGTA 405 0.0 17.814816 10 CCGTCGT 395 0.0 17.329113 9 GTCGTAG 410 0.0 17.146343 11 AGACGGA 600 0.0 16.958334 6 ACACCGT 90 4.4478427E-5 16.444445 6 TACCGTC 445 0.0 16.213484 7 TCGTTAC 275 0.0 16.145454 23 CGGACCA 610 0.0 16.07377 9 GCGCAAG 625 0.0 15.984 1 ATACCGT 465 0.0 15.913979 6 ACGGACC 630 0.0 15.563492 8 CGCAAGA 670 0.0 15.462687 2 CTTATAC 1815 0.0 15.289256 37 TAGAGTG 400 0.0 15.262501 5 ATCTCGT 450 0.0 15.211111 20 ATTATAC 110 1.4525507E-5 15.136364 3 GACGGAC 650 0.0 15.084617 7 >>END_MODULE