##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727228.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5530973 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.200026649922176 31.0 31.0 34.0 30.0 34.0 2 31.40963172302595 31.0 31.0 34.0 30.0 34.0 3 31.56279591312415 31.0 31.0 34.0 30.0 34.0 4 35.37246665279328 37.0 35.0 37.0 33.0 37.0 5 35.19784023534376 37.0 35.0 37.0 32.0 37.0 6 35.21086940760694 37.0 35.0 37.0 32.0 37.0 7 35.10379493806967 37.0 35.0 37.0 32.0 37.0 8 35.12656561512775 37.0 35.0 37.0 32.0 37.0 9 36.67988381067852 39.0 35.0 39.0 32.0 39.0 10 36.41917344380455 38.0 35.0 39.0 32.0 39.0 11 36.57574951098116 39.0 35.0 39.0 32.0 39.0 12 36.43773853171946 38.0 35.0 39.0 32.0 39.0 13 36.5058198620749 38.0 35.0 39.0 32.0 39.0 14 37.497009838956004 39.0 36.0 41.0 32.0 41.0 15 37.500866122470676 39.0 36.0 41.0 32.0 41.0 16 37.43863584219268 39.0 36.0 41.0 32.0 41.0 17 37.45034264314796 39.0 36.0 41.0 32.0 41.0 18 37.392033011189895 39.0 36.0 41.0 32.0 41.0 19 37.41970843104821 39.0 36.0 41.0 32.0 41.0 20 37.34707166352105 39.0 36.0 41.0 31.0 41.0 21 37.24684318654241 39.0 36.0 41.0 31.0 41.0 22 37.17637981599259 39.0 36.0 40.0 31.0 41.0 23 37.060100094504165 39.0 36.0 40.0 31.0 41.0 24 36.925319288306056 39.0 36.0 40.0 31.0 41.0 25 36.79197963902554 39.0 35.0 40.0 30.0 41.0 26 36.56521031652116 38.0 35.0 40.0 30.0 41.0 27 36.376407008314814 38.0 35.0 40.0 30.0 41.0 28 36.135305668640946 38.0 35.0 40.0 29.0 41.0 29 36.07217446188944 38.0 35.0 40.0 29.0 41.0 30 35.961620857668265 38.0 35.0 40.0 29.0 41.0 31 36.0369289454134 38.0 35.0 40.0 30.0 41.0 32 35.97337538982743 38.0 35.0 40.0 29.0 41.0 33 35.924617603448795 38.0 34.0 40.0 29.0 41.0 34 35.95113680721276 38.0 35.0 40.0 29.0 41.0 35 35.70866626902717 38.0 34.0 40.0 27.0 41.0 36 35.63915499135505 38.0 34.0 40.0 27.0 41.0 37 35.534900278847864 38.0 34.0 40.0 27.0 41.0 38 35.3968075779795 38.0 34.0 40.0 26.0 41.0 39 35.290069577269676 38.0 34.0 40.0 26.0 41.0 40 35.06945920726787 38.0 33.0 40.0 25.0 41.0 41 34.95510844113685 38.0 33.0 40.0 25.0 41.0 42 34.702846858952306 38.0 33.0 40.0 24.0 41.0 43 34.33212890390172 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 3.0 13 4.0 14 9.0 15 56.0 16 140.0 17 272.0 18 565.0 19 1048.0 20 2319.0 21 4423.0 22 7916.0 23 13714.0 24 22145.0 25 34750.0 26 50713.0 27 72992.0 28 100570.0 29 132488.0 30 169847.0 31 209992.0 32 255933.0 33 311072.0 34 381835.0 35 460709.0 36 571505.0 37 739377.0 38 958593.0 39 1027980.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.40138706155318 18.936324585204087 12.644972231829735 25.017316121412996 2 17.768772329931824 23.493009277029557 34.01461189559233 24.72360649744629 3 20.247215092172752 25.326881906673567 30.186316223203402 24.23958677795028 4 14.457546619735803 15.714667202316843 34.22687111291268 35.60091506503467 5 13.90319569450077 38.76330620308578 32.922688286491365 14.410809815922082 6 33.874980044198374 35.04016381927737 16.141084037112456 14.943772099411804 7 27.69689890006695 32.49878457190082 21.58329104119655 18.22102548683568 8 28.487121524549114 33.100776301023345 20.380048863011986 18.03205331141555 9 28.64662329756446 13.144920432625506 19.405120943457867 38.80333532635216 10 17.044849070859684 27.128698693701814 31.959801647919818 23.866650587518688 11 36.11841894726299 22.620414165825796 20.59404376047397 20.667123126437247 12 21.56242671949402 26.25684486255854 29.300070710885773 22.88065770706167 13 30.036378770968508 19.25554509125248 25.594520168512847 25.113555969266166 14 22.672701530092446 21.161791966802223 26.021081643320258 30.14442485978507 15 25.696852976863205 27.71129058124131 23.06107804178397 23.53077840011152 16 23.711108334826438 26.260659742869834 25.854673309741344 24.17355861256238 17 23.404127989776843 26.490221521602074 26.059031566416973 24.046618922204104 18 23.278200779501184 24.893739311329128 28.128830135312537 23.69922977385715 19 23.827308504308373 26.00287508183461 28.182473499689838 21.987342914167183 20 23.345874225023337 24.7173688969373 27.790697947720954 24.14605893031841 21 24.40990039184787 25.942686756923237 27.822898430348513 21.824514420880377 22 24.494171278724377 24.972929717791065 26.699280578661295 23.833618424823264 23 22.44536359154167 25.565447526140517 27.83018467094307 24.159004211374743 24 22.531026638531774 26.27007942363848 27.768242585888597 23.43065135194115 25 23.403007029685373 25.21095293721376 26.936255157998424 24.449784875102445 26 22.814683781678198 26.413562315346685 27.79395234798651 22.977801554988606 27 24.203589495012903 26.029271883988585 26.63444569337077 23.132692927627744 28 22.35340870403815 27.173356297345876 27.351390071873432 23.121844926742547 29 22.740881215655907 26.778452905121757 28.029570927212987 22.45109495200935 30 23.40754511005568 26.866466352303654 27.44799151975611 22.27799701788456 31 23.314179982437086 26.622422492389674 26.98884988229015 23.074547642883086 32 22.355415584201914 26.852960591201587 26.77962810521765 24.011995719378852 33 21.87647634512047 26.05125716578258 27.740652503637243 24.3316139854597 34 23.122730846814836 26.517088403794414 28.081550931454558 22.278629817936192 35 23.26823869868828 26.193329817375716 27.995164684405438 22.54326679953057 36 22.067310760692557 26.887421074013563 27.80228722866664 23.242980936627244 37 22.357747904392227 26.450047758323898 28.27108358692042 22.921120750363453 38 22.432653350504513 25.621061610678623 28.293611268758678 23.65267377005818 39 22.16949892903111 25.485931679652023 28.61858121527623 23.725988176040637 40 22.850102504568365 25.422705914492806 28.863836435289052 22.86335514564978 41 21.24552045363447 26.035328684482824 29.43145808160698 23.28769278027573 42 22.16993284906652 26.046104365362115 29.11438909573415 22.669573689837215 43 21.049876757669946 25.02349948191756 29.039393249614488 24.88723051079801 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2988.0 1 3299.0 2 3610.0 3 6681.5 4 9753.0 5 9753.0 6 14329.0 7 18905.0 8 17802.0 9 16699.0 10 21420.0 11 26141.0 12 26141.0 13 42735.0 14 59329.0 15 86658.5 16 113988.0 17 99451.0 18 84914.0 19 84914.0 20 86485.5 21 88057.0 22 68102.5 23 48148.0 24 53971.5 25 59795.0 26 59795.0 27 66521.5 28 73248.0 29 80523.5 30 87799.0 31 95615.5 32 103432.0 33 103432.0 34 119452.5 35 135473.0 36 163003.5 37 190534.0 38 219508.0 39 248482.0 40 248482.0 41 272231.0 42 295980.0 43 313641.0 44 331302.0 45 369415.5 46 407529.0 47 407529.0 48 454342.0 49 501155.0 50 501953.0 51 502751.0 52 471682.0 53 440613.0 54 440613.0 55 419391.5 56 398170.0 57 378293.5 58 358417.0 59 330505.0 60 302593.0 61 302593.0 62 249586.0 63 196579.0 64 172665.0 65 148751.0 66 125589.0 67 102427.0 68 102427.0 69 84758.0 70 67089.0 71 57510.0 72 47931.0 73 34892.5 74 21854.0 75 21854.0 76 17223.5 77 12593.0 78 11211.5 79 9830.0 80 7751.5 81 5673.0 82 5673.0 83 4771.0 84 3869.0 85 3410.5 86 2952.0 87 1904.5 88 857.0 89 857.0 90 608.0 91 359.0 92 274.0 93 189.0 94 195.5 95 202.0 96 202.0 97 104.0 98 6.0 99 6.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5530973.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.761603524666 #Duplication Level Percentage of deduplicated Percentage of total 1 80.05352580240472 34.232171311140505 2 10.022030567872081 8.571161953108582 3 3.388515113018615 4.346950194007225 4 1.7653343670611172 3.0195411317093876 5 0.9972499520963041 2.132200353326716 6 0.6795378459877779 1.7434876770080943 7 0.4929753463971062 1.4756291417047558 8 0.3627767018594565 1.2410330794320032 9 0.2756336991973607 1.0607885066803127 >10 1.7216720381375177 13.575135724246671 >50 0.1244544525365394 3.638662984514699 >100 0.09024259131015577 7.966247198396896 >500 0.013619771850030785 4.131525007753694 >1k 0.011837741725850833 9.22804091775779 >5k 4.242918181307241E-4 1.1064207276725069 >10k+ 1.6971672725228965E-4 2.5310040915403675 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 51874 0.9378819965311709 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 34603 0.6256222910507789 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 32476 0.587166127912756 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20547 0.37148979031356694 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 9130 0.16507041346974574 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 8184 0.14796673207408534 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7173 0.12968785058252863 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.616000295065624E-5 2 0.0 0.0 0.0 0.0 3.616000295065624E-5 3 0.0 0.0 0.0 0.0 3.616000295065624E-5 4 0.0 0.0 0.0 1.808000147532812E-5 3.616000295065624E-5 5 0.0 0.0 0.0 1.808000147532812E-5 3.616000295065624E-5 6 1.808000147532812E-5 0.0 0.0 1.808000147532812E-5 1.0848000885196872E-4 7 1.808000147532812E-5 0.0 0.0 1.808000147532812E-5 1.0848000885196872E-4 8 1.808000147532812E-5 0.0 0.0 1.808000147532812E-5 1.808000147532812E-4 9 1.808000147532812E-5 0.0 0.0 3.616000295065624E-5 1.808000147532812E-4 10 1.808000147532812E-5 1.808000147532812E-5 0.0 3.616000295065624E-5 1.808000147532812E-4 11 1.808000147532812E-5 1.808000147532812E-5 0.0 7.232000590131248E-5 1.808000147532812E-4 12 1.808000147532812E-5 1.808000147532812E-5 0.0 2.3504001917926557E-4 1.9888001622860932E-4 13 1.808000147532812E-5 1.808000147532812E-5 0.0 3.2544002655590616E-4 2.1696001770393745E-4 14 1.808000147532812E-5 1.808000147532812E-5 0.0 5.062400413091873E-4 3.2544002655590616E-4 15 1.808000147532812E-5 1.808000147532812E-5 0.0 7.955200649144373E-4 3.616000295065624E-4 16 1.808000147532812E-5 1.808000147532812E-5 0.0 0.001663360135730187 4.1584003393254677E-4 17 1.808000147532812E-5 3.616000295065624E-5 0.0 0.0026396802153979054 4.1584003393254677E-4 18 1.808000147532812E-5 3.616000295065624E-5 0.0 0.003182080259657749 5.062400413091873E-4 19 1.808000147532812E-5 3.616000295065624E-5 0.0 0.0045380803703073585 5.243200427845155E-4 20 1.808000147532812E-5 3.616000295065624E-5 0.0 0.005622880458827045 5.243200427845155E-4 21 1.808000147532812E-5 3.616000295065624E-5 0.0 0.008768800715534139 5.424000442598436E-4 22 1.808000147532812E-5 3.616000295065624E-5 0.0 0.013776961124200028 5.604800457351718E-4 23 1.808000147532812E-5 3.616000295065624E-5 0.0 0.022437281830882196 6.689600545871405E-4 24 1.808000147532812E-5 3.616000295065624E-5 0.0 0.032236642630510036 6.870400560624686E-4 25 1.808000147532812E-5 3.616000295065624E-5 0.0 0.03673856299786674 6.870400560624686E-4 26 1.808000147532812E-5 3.616000295065624E-5 0.0 0.04666448380782188 6.870400560624686E-4 27 1.808000147532812E-5 3.616000295065624E-5 0.0 0.09488384774252198 6.870400560624686E-4 28 1.808000147532812E-5 3.616000295065624E-5 0.0 0.17029553389611557 6.870400560624686E-4 29 1.808000147532812E-5 3.616000295065624E-5 0.0 0.2632809814837281 6.870400560624686E-4 30 1.808000147532812E-5 3.616000295065624E-5 0.0 0.4067638731919321 6.870400560624686E-4 31 1.808000147532812E-5 3.616000295065624E-5 0.0 0.779031103568938 6.870400560624686E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1820 0.0 18.398352 5 CAAGACG 1965 0.0 17.229008 4 CTTATAC 5045 0.0 16.538157 37 TAATCCC 1270 0.0 15.586614 5 CGCTTCG 1295 0.0 15.571428 32 AGACGGA 2210 0.0 15.402715 6 TATACTG 545 0.0 15.275229 5 CGCAAGA 2175 0.0 15.14023 2 GACGGAC 2205 0.0 15.102041 7 ACGGACC 2255 0.0 15.013303 8 TACGGAT 2280 0.0 15.010964 27 ACGGATG 2290 0.0 14.86463 28 GTTACGG 1805 0.0 14.861496 25 GCGCAAG 2275 0.0 14.8 1 TACGTCG 75 0.004107036 14.8 12 CGGACCA 2275 0.0 14.718681 9 TCGTTAC 1505 0.0 14.504984 23 CGTTACG 1205 0.0 14.431535 24 ACTAGAC 335 0.0 14.358209 3 GTAAACG 1375 0.0 14.261818 27 >>END_MODULE