##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727227.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5425028 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.225650263924905 31.0 31.0 34.0 30.0 34.0 2 31.44100988971854 31.0 31.0 34.0 30.0 34.0 3 31.60390729780565 31.0 31.0 34.0 30.0 34.0 4 35.406935595539785 37.0 35.0 37.0 33.0 37.0 5 35.22880545501332 37.0 35.0 37.0 33.0 37.0 6 35.237242277827875 37.0 35.0 37.0 32.0 37.0 7 35.13184890474298 37.0 35.0 37.0 32.0 37.0 8 35.14628864588349 37.0 35.0 37.0 32.0 37.0 9 36.71093033989871 39.0 35.0 39.0 32.0 39.0 10 36.44675253289015 38.0 35.0 39.0 32.0 39.0 11 36.60120427028211 39.0 35.0 39.0 32.0 39.0 12 36.463388944720656 38.0 35.0 39.0 32.0 39.0 13 36.52479452640613 38.0 35.0 39.0 32.0 39.0 14 37.53242084649148 39.0 36.0 41.0 32.0 41.0 15 37.53130619786663 39.0 36.0 41.0 32.0 41.0 16 37.46985324315377 39.0 36.0 41.0 32.0 41.0 17 37.46618690262981 39.0 36.0 41.0 32.0 41.0 18 37.39174876148105 39.0 36.0 41.0 32.0 41.0 19 37.4019199532242 39.0 36.0 41.0 32.0 41.0 20 37.326468361084956 39.0 36.0 41.0 31.0 41.0 21 37.21909859267086 39.0 36.0 41.0 31.0 41.0 22 37.15743531646288 39.0 36.0 40.0 31.0 41.0 23 37.037570497332 39.0 36.0 40.0 31.0 41.0 24 36.90214262488599 39.0 36.0 40.0 31.0 41.0 25 36.770877680262664 39.0 35.0 40.0 30.0 41.0 26 36.54380051126003 38.0 35.0 40.0 30.0 41.0 27 36.35908662591235 38.0 35.0 40.0 30.0 41.0 28 36.10953325955184 38.0 35.0 40.0 29.0 41.0 29 36.04403866671287 38.0 35.0 40.0 29.0 41.0 30 35.9336960104169 38.0 34.0 40.0 29.0 41.0 31 36.050876972432214 38.0 35.0 40.0 29.0 41.0 32 35.980494478553844 38.0 35.0 40.0 29.0 41.0 33 35.95758049543707 38.0 35.0 40.0 29.0 41.0 34 35.9908723051752 38.0 35.0 40.0 29.0 41.0 35 35.7621039006619 38.0 34.0 40.0 27.0 41.0 36 35.69883104750796 38.0 34.0 40.0 27.0 41.0 37 35.60864552219822 38.0 34.0 40.0 27.0 41.0 38 35.484588282309325 38.0 34.0 40.0 27.0 41.0 39 35.39206470455083 38.0 34.0 40.0 26.0 41.0 40 35.18061676363698 38.0 34.0 40.0 25.0 41.0 41 35.077001814552844 38.0 33.0 40.0 25.0 41.0 42 34.84180634643729 38.0 33.0 40.0 24.0 41.0 43 34.4626763216706 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 3.0 12 3.0 13 10.0 14 14.0 15 50.0 16 147.0 17 300.0 18 567.0 19 1140.0 20 2258.0 21 4405.0 22 7710.0 23 13320.0 24 21340.0 25 33484.0 26 49282.0 27 70638.0 28 96736.0 29 128423.0 30 163263.0 31 203819.0 32 248688.0 33 304206.0 34 371902.0 35 450183.0 36 557939.0 37 723510.0 38 957228.0 39 1014459.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.391075585232 18.6334337813556 12.195255029098467 25.780235604313933 2 18.104127757497288 23.24721641989682 33.29499866175806 25.35365716084783 3 20.28186766962309 24.87332784273187 29.841689296350175 25.003115191294867 4 14.786283130704577 15.607698245981402 33.844857574928646 35.76116104838537 5 14.403280499197423 37.959085188131745 32.859738235452426 14.777896077218402 6 34.57163723394607 34.57106580832394 15.901226684912961 14.956070272817026 7 28.283337892449588 31.927282218635554 21.415649836277343 18.373730052637516 8 28.51601871916606 32.6091773166885 20.45100965377506 18.42379431037038 9 28.896625049677162 12.961444622958629 19.021634542715724 39.120295784648484 10 17.25823350589158 26.435605493649067 31.933973428339907 24.372187572119444 11 36.826703935905954 22.004052329315165 20.392244980118075 20.776998754660806 12 21.985029386023445 25.669747695311436 28.707151373227934 23.638071545437185 13 30.30876522664952 18.702299785365163 25.038009020414272 25.95092596757104 14 23.05796394046261 20.92252795745939 24.944018722115352 31.075489379962644 15 26.39872089139448 27.156210069330516 22.175056055010224 24.27001298426478 16 24.530970162734643 25.79197747919458 25.087925813470456 24.589126544600322 17 24.31924775319132 25.888566842419987 25.19695750879074 24.595227895597958 18 24.352445738528907 24.15622555312157 27.28544442535596 24.205884282993562 19 24.703725031465275 25.721784293094892 26.892008667973695 22.682482007466138 20 24.030051089137235 24.211782870060762 26.551623328027063 25.206542712774937 21 24.99756683283478 25.71350783811623 26.669337006186883 22.619588322862114 22 25.08847880600801 24.612499695854105 25.38438511285103 24.914636385286858 23 22.89376202297942 24.917677844243386 26.853262324176026 25.33529780860117 24 23.24386159850235 26.035091431786157 26.53090454095352 24.190142428757973 25 24.267358620084543 24.573605887379752 25.547130816652007 25.6119046758837 26 23.665794904653026 25.89577417849272 26.661595110661178 23.776835806193077 27 25.223630182185236 25.253399613790013 25.33480011531738 24.188170088707377 28 23.095622732269767 26.551475863350383 26.307034728668683 24.045866675711167 29 23.526330186682905 26.058188086771167 26.89879204310098 23.51668968344495 30 24.03777455157835 26.40675771627354 26.501614369547955 23.053853362600158 31 24.521292793327518 25.98814236534816 25.434080708892193 24.056484132432125 32 22.984895193167667 26.2180397962923 25.598688154236253 25.198376856303785 33 22.713136227130992 25.359150220054165 26.611162191236616 25.316551361578227 34 24.007581159028117 25.820769957316347 26.924414030674125 23.247234852981403 35 24.226086943698725 25.66416247068218 27.004542649365128 23.10520793625397 36 23.08308823475197 26.29053711796511 26.663641183050114 23.962733464232812 37 23.33206390824158 26.006004024311025 27.138882969820617 23.523049097626778 38 23.5098694421485 24.99288482935019 27.33449486343665 24.16275086506466 39 23.256580426865998 24.594674903060408 27.349702158219273 24.799042511854317 40 23.896982651518112 24.80593648548911 27.734843027538293 23.56223783545449 41 22.13763689330267 25.35857879443203 28.39375206911374 24.110032243151554 42 23.507159778714506 25.38195194568581 28.059136284642218 23.051751990957467 43 22.211811625672713 24.15677854565912 28.104666003567168 25.526743825100993 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1465.0 1 1691.0 2 1917.0 3 4171.0 4 6425.0 5 6425.0 6 9354.0 7 12283.0 8 11863.5 9 11444.0 10 14427.0 11 17410.0 12 17410.0 13 29632.5 14 41855.0 15 62440.5 16 83026.0 17 74226.0 18 65426.0 19 65426.0 20 67444.0 21 69462.0 22 54404.0 23 39346.0 24 43313.0 25 47280.0 26 47280.0 27 53618.5 28 59957.0 29 66391.5 30 72826.0 31 79708.0 32 86590.0 33 86590.0 34 103688.5 35 120787.0 36 148877.5 37 176968.0 38 205859.0 39 234750.0 40 234750.0 41 256806.5 42 278863.0 43 294739.0 44 310615.0 45 350552.5 46 390490.0 47 390490.0 48 456791.0 49 523092.0 50 533218.5 51 543345.0 52 494418.0 53 445491.0 54 445491.0 55 424547.0 56 403603.0 57 389145.5 58 374688.0 59 348210.0 60 321732.0 61 321732.0 62 264266.5 63 206801.0 64 182375.5 65 157950.0 66 134815.5 67 111681.0 68 111681.0 69 93961.5 70 76242.0 71 66698.0 72 57154.0 73 42101.0 74 27048.0 75 27048.0 76 21182.5 77 15317.0 78 13727.0 79 12137.0 80 9918.5 81 7700.0 82 7700.0 83 6568.5 84 5437.0 85 4791.0 86 4145.0 87 2685.5 88 1226.0 89 1226.0 90 893.0 91 560.0 92 394.5 93 229.0 94 238.0 95 247.0 96 247.0 97 130.0 98 13.0 99 9.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5425028.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.099059784129956 #Duplication Level Percentage of deduplicated Percentage of total 1 80.32665180910823 33.0134986496153 2 9.84245695264112 8.090314534386458 3 3.4992396797089924 4.314463823860789 4 1.6625800850682568 2.733219132484966 5 1.003617280097151 2.0623863297549354 6 0.6444752961084041 1.5892397234492497 7 0.48280451327435414 1.3889968088577311 8 0.3717447059539165 1.222268631554706 9 0.2745007713891772 1.0153551252702226 >10 1.639734384117741 12.4656459136822 >50 0.12437084237090575 3.523323468022261 >100 0.0953557174262299 8.190076470994018 >500 0.016459454262696415 4.707031677332051 >1k 0.015016431891546805 11.679526116141156 >5k 7.666046310999588E-4 1.9401473398331235 >10k+ 2.2547195032351732E-4 2.0645062547607176 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37851 0.6977106846268812 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 25946 0.47826481264244164 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23566 0.43439407133013874 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13972 0.25754705782163706 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 10059 0.18541839784052727 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 9928 0.1830036637598921 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 9490 0.17492997271166158 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 7640 0.14082876622940932 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT 6508 0.11996251447918795 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCC 6181 0.11393489581989255 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 6103 0.11249711522226245 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAAC 5868 0.10816534034478716 No Hit GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGG 5668 0.10447872342778691 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGG 5614 0.10348333686019685 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 5576 0.10278287964596682 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.686616917000244E-5 2 0.0 0.0 0.0 0.0 3.686616917000244E-5 3 0.0 0.0 0.0 0.0 3.686616917000244E-5 4 0.0 0.0 0.0 0.0 3.686616917000244E-5 5 0.0 0.0 0.0 0.0 3.686616917000244E-5 6 0.0 0.0 0.0 0.0 9.21654229250061E-5 7 0.0 0.0 0.0 0.0 9.21654229250061E-5 8 0.0 0.0 0.0 0.0 1.1059850751000733E-4 9 0.0 1.843308458500122E-5 0.0 0.0 1.1059850751000733E-4 10 0.0 1.843308458500122E-5 0.0 1.843308458500122E-5 1.1059850751000733E-4 11 0.0 1.843308458500122E-5 0.0 1.843308458500122E-5 1.1059850751000733E-4 12 0.0 1.843308458500122E-5 0.0 5.5299253755003664E-5 1.1059850751000733E-4 13 0.0 1.843308458500122E-5 0.0 5.5299253755003664E-5 1.2903159209500854E-4 14 0.0 1.843308458500122E-5 0.0 1.2903159209500854E-4 2.764962687750183E-4 15 0.0 1.843308458500122E-5 0.0 2.580631841900171E-4 2.764962687750183E-4 16 1.843308458500122E-5 1.843308458500122E-5 0.0 7.926226371550524E-4 3.1336243794502077E-4 17 1.843308458500122E-5 1.843308458500122E-5 0.0 0.001493079851385099 3.1336243794502077E-4 18 1.843308458500122E-5 1.843308458500122E-5 0.0 0.0017880092047451183 3.31795522530022E-4 19 1.843308458500122E-5 1.843308458500122E-5 0.0 0.002506899503560166 3.31795522530022E-4 20 1.843308458500122E-5 1.843308458500122E-5 0.0 0.0035575853249052354 3.502286071150232E-4 21 1.843308458500122E-5 1.843308458500122E-5 0.0 0.0061197840822204055 3.686616917000244E-4 22 1.843308458500122E-5 1.843308458500122E-5 0.0 0.009548337815030632 3.686616917000244E-4 23 1.843308458500122E-5 1.843308458500122E-5 0.0 0.01452527065298096 5.345594529650354E-4 24 1.843308458500122E-5 1.843308458500122E-5 0.0 0.020921551003976385 5.345594529650354E-4 25 1.843308458500122E-5 1.843308458500122E-5 0.0 0.024423837075126617 5.529925375500366E-4 26 1.843308458500122E-5 1.843308458500122E-5 0.0 0.03225789802375213 5.529925375500366E-4 27 1.843308458500122E-5 1.843308458500122E-5 0.0 0.06390750425619923 5.529925375500366E-4 28 1.843308458500122E-5 1.843308458500122E-5 0.0 0.11762151273689278 5.714256221350378E-4 29 1.843308458500122E-5 1.843308458500122E-5 0.0 0.18200827719230206 5.714256221350378E-4 30 1.843308458500122E-5 1.843308458500122E-5 0.0 0.27697552897422834 5.714256221350378E-4 31 1.843308458500122E-5 1.843308458500122E-5 0.0 0.5666883193966925 6.082917913050402E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 2240 0.0 18.58259 5 TTATGCG 100 2.879824E-7 18.5 4 CAAGACG 2265 0.0 18.377483 4 CTTATAC 3585 0.0 16.771269 37 GACGGAC 2480 0.0 16.336695 7 CGAACGA 1065 0.0 16.15493 16 ACGGACC 2590 0.0 15.857142 8 AGACGGA 2710 0.0 15.564575 6 CGCAAGA 2615 0.0 15.5640545 2 CGGACCA 2630 0.0 15.545628 9 CTAGCGG 1320 0.0 15.416668 29 CGAGCCG 2075 0.0 15.33494 15 TATACTG 700 0.0 15.328571 5 ACGAACG 1130 0.0 15.225664 15 TACGGAT 2425 0.0 15.181443 27 TATACCG 110 1.4537698E-5 15.136364 5 ACGGATG 2460 0.0 15.115853 28 GCGCAAG 2690 0.0 15.061337 1 TCTAGCG 1375 0.0 14.8 28 CGGATGG 2615 0.0 14.7858515 29 >>END_MODULE