##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727226.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4674439 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.134244130686056 31.0 31.0 33.0 30.0 34.0 2 31.35485391936872 31.0 31.0 34.0 30.0 34.0 3 31.505703893023313 31.0 31.0 34.0 30.0 34.0 4 35.32953665669827 37.0 35.0 37.0 33.0 37.0 5 35.15233164878181 37.0 35.0 37.0 32.0 37.0 6 35.16198906435617 37.0 35.0 37.0 32.0 37.0 7 35.05800653297647 37.0 35.0 37.0 32.0 37.0 8 35.075450337462954 37.0 35.0 37.0 32.0 37.0 9 36.6106431167462 39.0 35.0 39.0 32.0 39.0 10 36.34793950675151 38.0 35.0 39.0 32.0 39.0 11 36.50423334222567 38.0 35.0 39.0 32.0 39.0 12 36.361778600597845 38.0 35.0 39.0 32.0 39.0 13 36.42524332866468 38.0 35.0 39.0 32.0 39.0 14 37.39254528725265 39.0 36.0 41.0 32.0 41.0 15 37.387032968020335 39.0 36.0 41.0 32.0 41.0 16 37.34038908198396 39.0 36.0 41.0 32.0 41.0 17 37.34960473331666 39.0 36.0 41.0 32.0 41.0 18 37.29666233744841 39.0 36.0 41.0 32.0 41.0 19 37.31097870781927 39.0 36.0 41.0 31.0 41.0 20 37.25175470254292 39.0 36.0 40.0 31.0 41.0 21 37.15367576729528 39.0 36.0 40.0 31.0 41.0 22 37.08773245302805 39.0 36.0 40.0 31.0 41.0 23 36.966950258629964 39.0 36.0 40.0 31.0 41.0 24 36.82266278370517 39.0 35.0 40.0 30.0 41.0 25 36.69969636998151 39.0 35.0 40.0 30.0 41.0 26 36.45182341667096 38.0 35.0 40.0 30.0 41.0 27 36.26725495829553 38.0 35.0 40.0 30.0 41.0 28 36.04253259054188 38.0 35.0 40.0 29.0 41.0 29 35.9651119631682 38.0 34.0 40.0 29.0 41.0 30 35.84665133078001 38.0 34.0 40.0 29.0 41.0 31 35.934889299015346 38.0 34.0 40.0 29.0 41.0 32 35.87207170742842 38.0 34.0 40.0 29.0 41.0 33 35.81159707079288 38.0 34.0 40.0 29.0 41.0 34 35.83602631246231 38.0 34.0 40.0 29.0 41.0 35 35.59765268088855 38.0 34.0 40.0 27.0 41.0 36 35.52728530632232 38.0 34.0 40.0 27.0 41.0 37 35.40986052016081 38.0 34.0 40.0 26.0 41.0 38 35.27865055036551 38.0 34.0 40.0 26.0 41.0 39 35.17606754521773 38.0 33.0 40.0 26.0 41.0 40 34.919888996305225 38.0 33.0 40.0 25.0 41.0 41 34.80160592533136 38.0 33.0 40.0 24.0 41.0 42 34.534963446950535 38.0 33.0 40.0 24.0 41.0 43 34.15126884744886 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 1.0 14 11.0 15 46.0 16 120.0 17 233.0 18 435.0 19 921.0 20 2039.0 21 4000.0 22 7166.0 23 12402.0 24 20187.0 25 30990.0 26 45337.0 27 64777.0 28 88466.0 29 116609.0 30 148059.0 31 182885.0 32 221910.0 33 268603.0 34 327699.0 35 393643.0 36 488342.0 37 631291.0 38 808613.0 39 809649.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.30562448242452 19.33592458902555 12.810328683292264 24.548122245257666 2 18.20490116567999 23.926315008068347 32.7813669191105 25.087416907141158 3 20.667806339969353 25.234172485725026 30.00890588154001 24.089115292765616 4 14.656047495752967 15.8432487834369 33.689368927479855 35.81133479333028 5 14.119576702145434 38.86825777382056 32.441390293038374 14.570775230995633 6 34.04797880558501 34.939764964309084 15.9499995614447 15.062256668661202 7 28.04351495441485 32.13324636389522 21.153640041083005 18.669598640606928 8 29.439211849807002 31.971109260383972 19.938948823591453 18.650730066217573 9 28.434791854166885 12.775287045140605 19.366174208284672 39.423746892407834 10 17.34218801443339 27.527538598749494 31.48067607685115 23.649597309965966 11 36.21080518967089 22.64896386496861 20.294028866351663 20.846202079008837 12 21.797139720937636 26.69128851611926 28.767473487192795 22.74409827575031 13 30.68607805129129 19.144072689792292 25.05603346198335 25.113815796933064 14 23.321044514646573 21.098275108521044 25.53793086186385 30.042749514968538 15 25.88684973747652 27.592145282032774 22.80658705782662 23.71441792266409 16 24.1386399523023 25.82928133194165 25.409808535313005 24.622270180443042 17 23.759578422137928 26.312098628305986 26.032835170166948 23.89548777938914 18 23.582509045470484 23.996826143201353 28.231751446537224 24.18891336479094 19 23.691570261158613 25.711256473771506 28.3339669209503 22.26320634411958 20 23.577588668929042 24.509679129409967 27.915200091390645 23.997532110270345 21 24.476605641874887 25.4024921493253 27.627122741359976 22.493779467439836 22 24.507497049378546 25.05682500081828 26.775769242041665 23.65990870776151 23 22.785686153996235 25.333307376564335 27.564954853405936 24.316051616033498 24 22.85831519033621 26.46396711990466 27.31502111804219 23.36269657171695 25 23.687484209335068 25.071479165735184 26.74481365571355 24.4962229692162 26 23.120464295287626 26.350712887685564 27.509739671434367 23.019083145592447 27 24.173146766916844 25.79918146327292 26.606508289016073 23.421163480794167 28 22.72803217669543 26.587211855797026 27.77220967050805 22.91254629699949 29 22.899860282699162 26.479562574246877 27.79910059795411 22.82147654509985 30 22.803891547199566 27.197723619882513 27.666528539574482 22.331856293343435 31 23.33933547961584 26.782935877438984 26.640437494210534 23.23729114873464 32 22.36022333375192 26.977141000235537 26.767447387804182 23.89518827820836 33 22.11150899605279 26.525514612555646 27.54161515424632 23.82136123714525 34 23.106623062147136 26.667692101661828 27.53648084829003 22.689203987901006 35 23.07481175815964 26.673404017038195 27.92765078333464 22.324133441467524 36 22.160990869706502 27.252361192433998 27.3227439699181 23.263903967941392 37 22.54935832941664 26.920770599423804 27.62962571551367 22.900245355645886 38 22.332476688646487 26.23914869784374 27.97360282164341 23.45477179186636 39 22.558814009552805 25.815290348210766 27.820087073550432 23.805808568685997 40 22.62134557751208 26.179355426394483 28.418426253931223 22.780872742162213 41 21.504612639078186 26.375165019802377 28.84977213308378 23.27045020803566 42 22.42885189003429 26.363997904347453 28.60212744245887 22.605022763159386 43 21.66022489543665 25.270176806243487 28.732517420807074 24.337080877512786 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1254.0 1 1263.5 2 1273.0 3 2972.5 4 4672.0 5 4672.0 6 7774.0 7 10876.0 8 10421.5 9 9967.0 10 13352.0 11 16737.0 12 16737.0 13 31257.0 14 45777.0 15 75563.0 16 105349.0 17 90174.5 18 75000.0 19 75000.0 20 76928.5 21 78857.0 22 60625.0 23 42393.0 24 48289.0 25 54185.0 26 54185.0 27 60863.5 28 67542.0 29 74083.5 30 80625.0 31 86407.5 32 92190.0 33 92190.0 34 104419.5 35 116649.0 36 137528.0 37 158407.0 38 179636.5 39 200866.0 40 200866.0 41 222706.0 42 244546.0 43 258747.5 44 272949.0 45 301324.0 46 329699.0 47 329699.0 48 372489.0 49 415279.0 50 413686.5 51 412094.0 52 383984.5 53 355875.0 54 355875.0 55 343311.5 56 330748.0 57 317873.5 58 304999.0 59 285270.0 60 265541.0 61 265541.0 62 224304.5 63 183068.0 64 162230.0 65 141392.0 66 118584.5 67 95777.0 68 95777.0 69 79166.5 70 62556.0 71 53001.0 72 43446.0 73 32013.5 74 20581.0 75 20581.0 76 16160.5 77 11740.0 78 10351.0 79 8962.0 80 7158.5 81 5355.0 82 5355.0 83 4390.5 84 3426.0 85 2925.0 86 2424.0 87 1594.5 88 765.0 89 765.0 90 535.5 91 306.0 92 221.5 93 137.0 94 138.5 95 140.0 96 140.0 97 74.5 98 9.0 99 7.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4674439.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.10830639163942 #Duplication Level Percentage of deduplicated Percentage of total 1 80.03297330494229 34.50085934663351 2 9.933359759753715 8.564206320436897 3 3.4326600337577187 4.439284814206891 4 1.705483385170212 2.940820012550715 5 1.0068218846784607 2.1701193143263464 6 0.699526106949574 1.8093231448399774 7 0.513563785746086 1.5497205519314774 8 0.35866608902262204 1.2369190126302567 9 0.29465983123302253 1.1432057657491708 >10 1.7854963421526961 14.271092970733894 >50 0.12667405152940117 3.7701734969259286 >100 0.08538520647467754 7.532969624381434 >500 0.013733481700102886 4.205451870597241 >1k 0.010548905975496695 8.255603720364366 >5k 2.487949522522802E-4 0.7042548726511739 >10k+ 1.9903596180182416E-4 2.9059951610407664 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 53623 1.1471537012248956 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 33351 0.7134759914505249 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 31417 0.6721020426194458 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17085 0.36549840526317706 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 8627 0.18455690618703122 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 6817 0.14583568210003384 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 6333 0.13548149842152182 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 6020 0.12878550773686426 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5035 0.10771346037460323 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.1392941484528947E-5 2 0.0 0.0 0.0 0.0 2.1392941484528947E-5 3 0.0 0.0 0.0 0.0 2.1392941484528947E-5 4 0.0 0.0 0.0 0.0 4.278588296905789E-5 5 0.0 0.0 0.0 0.0 4.278588296905789E-5 6 0.0 0.0 0.0 0.0 1.0696470742264473E-4 7 0.0 0.0 0.0 0.0 1.0696470742264473E-4 8 0.0 0.0 0.0 0.0 1.4975059039170263E-4 9 0.0 0.0 0.0 2.1392941484528947E-5 1.4975059039170263E-4 10 0.0 0.0 0.0 8.557176593811579E-5 1.4975059039170263E-4 11 0.0 0.0 0.0 1.0696470742264473E-4 1.4975059039170263E-4 12 0.0 0.0 0.0 1.2835764890717369E-4 1.7114353187623157E-4 13 0.0 0.0 0.0 1.4975059039170263E-4 2.1392941484528946E-4 14 0.0 0.0 0.0 2.1392941484528946E-4 2.1392941484528946E-4 15 2.1392941484528947E-5 0.0 0.0 3.6368000523699206E-4 2.781082392988763E-4 16 4.278588296905789E-5 0.0 0.0 8.985035423502157E-4 3.4228706375246315E-4 17 4.278588296905789E-5 0.0 0.0 0.0014975059039170262 3.6368000523699206E-4 18 4.278588296905789E-5 0.0 0.0 0.0017542212017313736 3.8507294672152103E-4 19 4.278588296905789E-5 0.0 0.0 0.0024174023877517707 4.0646588820604995E-4 20 4.278588296905789E-5 0.0 0.0 0.0031019765152566973 4.278588296905789E-4 21 4.278588296905789E-5 0.0 0.0 0.004856197716988071 4.278588296905789E-4 22 4.278588296905789E-5 0.0 0.0 0.007637280109976834 4.278588296905789E-4 23 4.278588296905789E-5 0.0 0.0 0.01238651311954226 4.706447126596368E-4 24 4.278588296905789E-5 0.0 0.0 0.01790589202255073 4.706447126596368E-4 25 4.278588296905789E-5 0.0 0.0 0.020216329702879853 4.706447126596368E-4 26 4.278588296905789E-5 0.0 0.0 0.024430739175332054 4.920376541441658E-4 27 4.278588296905789E-5 0.0 0.0 0.04304259826687224 5.134305956286947E-4 28 4.278588296905789E-5 0.0 0.0 0.07622305050937664 5.134305956286947E-4 29 4.278588296905789E-5 0.0 0.0 0.12016415231859909 5.348235371132236E-4 30 4.278588296905789E-5 0.0 0.0 0.19576680752492437 5.348235371132236E-4 31 4.278588296905789E-5 0.0 0.0 0.4173976813046443 5.348235371132236E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1625 0.0 19.923077 5 CAAGACG 1770 0.0 19.231638 4 ACGGACC 1855 0.0 17.053907 8 GACGGAC 1920 0.0 16.572918 7 CGCAAGA 1970 0.0 16.52792 2 TAGGCCG 160 6.311893E-10 16.1875 5 CTTATAC 2345 0.0 16.093815 37 CGGACCA 1975 0.0 15.924051 9 AGACGGA 2055 0.0 15.754259 6 GCAAGAC 2290 0.0 15.591702 3 GCGCAAG 2140 0.0 15.387852 1 GTACTAG 185 3.0559022E-10 15.0 1 GCCGATA 100 1.0945037E-4 14.8 2 GAACAGT 3155 0.0 14.366085 1 CAGAGCG 2260 0.0 14.243363 14 AGCGAAA 2225 0.0 14.134831 17 GCGAAAG 2240 0.0 14.122768 18 GAGCGAA 2300 0.0 13.995651 16 AGAGCGA 2300 0.0 13.915216 15 TTAGAGT 935 0.0 13.850268 4 >>END_MODULE