##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727225.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3105073 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.60388113258529 31.0 30.0 31.0 27.0 34.0 2 30.826293938983078 31.0 31.0 33.0 27.0 34.0 3 30.931835096952632 31.0 31.0 34.0 27.0 34.0 4 34.78966967926358 35.0 35.0 37.0 32.0 37.0 5 34.575911741849545 35.0 35.0 37.0 30.0 37.0 6 34.65353149507274 35.0 35.0 37.0 31.0 37.0 7 34.575540414025696 35.0 35.0 37.0 30.0 37.0 8 34.619024415851094 35.0 35.0 37.0 30.0 37.0 9 36.066818074808545 37.0 35.0 39.0 31.0 39.0 10 35.759414029879494 37.0 35.0 39.0 30.0 39.0 11 35.97383314337537 37.0 35.0 39.0 30.0 39.0 12 35.79354237404402 37.0 35.0 39.0 30.0 39.0 13 35.914858684481814 37.0 35.0 39.0 30.0 39.0 14 36.725105979795 38.0 36.0 40.0 31.0 41.0 15 36.7687091414598 38.0 36.0 40.0 31.0 41.0 16 36.6770977687159 38.0 36.0 40.0 31.0 41.0 17 36.707348265242075 38.0 36.0 40.0 31.0 41.0 18 36.649645596093876 38.0 36.0 40.0 30.0 41.0 19 36.68480161335982 38.0 35.0 40.0 30.0 41.0 20 36.597184349611105 38.0 35.0 40.0 30.0 41.0 21 36.494009319587654 38.0 35.0 40.0 30.0 41.0 22 36.417062014323015 38.0 35.0 40.0 30.0 41.0 23 36.276689147082855 38.0 35.0 40.0 30.0 41.0 24 36.117931204838015 38.0 34.0 40.0 29.0 41.0 25 35.985824165808665 38.0 34.0 40.0 29.0 41.0 26 35.670787128032096 38.0 34.0 40.0 27.0 41.0 27 35.466486295169226 38.0 34.0 40.0 27.0 41.0 28 35.21612374330652 38.0 33.0 40.0 27.0 41.0 29 35.150502097696254 38.0 33.0 40.0 27.0 41.0 30 35.032044335189546 37.0 33.0 40.0 26.0 41.0 31 35.07031171247826 37.0 33.0 40.0 26.0 41.0 32 35.00326626781399 37.0 33.0 40.0 26.0 41.0 33 34.910748636183435 37.0 33.0 40.0 25.0 41.0 34 34.946523962560626 37.0 33.0 40.0 25.0 41.0 35 34.6733867448527 37.0 33.0 40.0 25.0 41.0 36 34.57128544159831 37.0 33.0 40.0 24.0 41.0 37 34.43905376781802 37.0 33.0 40.0 24.0 41.0 38 34.30435194277236 37.0 33.0 40.0 24.0 41.0 39 34.16863919141353 37.0 33.0 40.0 23.0 41.0 40 33.89035716712618 37.0 32.0 40.0 22.0 41.0 41 33.75208473359564 37.0 32.0 40.0 22.0 41.0 42 33.44995785928382 37.0 31.0 40.0 20.0 41.0 43 33.093400380602965 36.0 31.0 39.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 6.0 14 25.0 15 60.0 16 116.0 17 239.0 18 529.0 19 1194.0 20 2398.0 21 4682.0 22 8051.0 23 13330.0 24 20753.0 25 30779.0 26 43701.0 27 58884.0 28 78243.0 29 98673.0 30 120928.0 31 145589.0 32 172880.0 33 204209.0 34 241204.0 35 286592.0 36 347910.0 37 431507.0 38 514969.0 39 277618.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.18446587246097 22.559308589524303 14.801262321368934 22.454963216645794 2 20.000882426918785 26.06312315362634 30.927388824674974 23.008605594779898 3 23.148924357011897 25.68090991741579 30.05826272039337 21.111903005178945 4 17.19772771847876 18.038384282752773 32.52754444098416 32.23634355778431 5 13.909238204705654 40.32156409849301 32.2300957175564 13.539101979244933 6 33.42726563916533 35.91570955014584 15.413325226170205 15.243699584518625 7 26.556766942355303 33.45141966066498 21.558494760026576 18.433318636953143 8 28.696813247224785 33.63418509001237 20.194694295432022 17.474307367330816 9 27.973609638163094 13.068162970725647 20.1190439000951 38.83918349101616 10 17.179274046053024 28.839611822330745 32.185265853653036 21.79584827796319 11 35.555621397628975 22.923841081997107 20.460388531928235 21.060148988445683 12 20.422611642302773 27.907846288960037 29.650446221393185 22.01909584734401 13 30.595931238975705 19.89293005349633 25.766479564248566 23.7446591432794 14 22.327268956317614 21.900612320547697 26.953794645085637 28.818324078049052 15 25.530671903687935 28.524321328355246 23.444827223063676 22.500179544893147 16 23.017107810347774 26.581661687180947 26.711578117487093 23.689652384984186 17 22.568358296246174 27.451399693340544 27.14358084334893 22.83666116706435 18 22.132716364478387 25.20530113140657 29.328779065741774 23.333203438373268 19 22.901522766131425 26.655669609055888 29.500884520267316 20.941923104545367 20 22.575024806180082 25.143627863177453 29.407682202640643 22.87366512800182 21 23.368436104400768 26.41219707233936 29.12079683794874 21.098569985311133 22 23.662599880904573 26.03210939002078 27.964978601147216 22.34031212792743 23 22.11510003146464 26.264567692933465 28.940446810751308 22.679885464850585 24 21.831564024420683 27.190149796800267 28.815747649089086 22.16253852968996 25 22.731091990429857 26.068759091976258 28.097890130119325 23.10225878747456 26 21.974201572716648 27.055724615814185 28.928949496517475 22.041124314951695 27 23.225734145380798 26.76632723288631 27.92762038122775 22.080318240505132 28 21.945152336193065 27.5314622232714 28.722223277842424 21.801162162693117 29 22.241763720208834 27.30840788606258 29.068302097889486 21.381526295839098 30 22.484559944323372 27.593103286138522 28.541647813111 21.38068895642711 31 22.42146964016627 27.51201018462368 28.27392463880881 21.792595536401237 32 21.7600359154197 27.61094505668627 28.204328851527805 22.424690176366223 33 21.37943294730913 27.180617009648405 28.826021159566938 22.613928883475527 34 22.194776097051502 27.463058034384375 29.031716806658007 21.310449061906116 35 22.09764472526089 27.30850450214858 29.150908851418304 21.442941921172224 36 21.359530033593412 27.77541784041792 28.702739033832696 22.162313092155966 37 21.41585721173061 27.627208764496036 29.06572566892952 21.89120835484383 38 21.7529185304178 26.553514200793348 29.003955784614405 22.689611484174446 39 21.48941425853756 26.572644185821076 29.357023168215367 22.580918387425996 40 21.830436836750696 26.467912348598567 29.714921356116264 21.98672945853447 41 20.682830967259065 26.7318997009088 30.111240540882612 22.47402879094952 42 21.101114208909095 26.84358789632321 29.73846347573793 22.316834419029764 43 20.44689448525043 25.888344654054833 29.933821201627143 23.730939659067595 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5135.0 1 4107.5 2 3080.0 3 3755.0 4 4430.0 5 4430.0 6 7375.5 7 10321.0 8 10008.5 9 9696.0 10 13238.5 11 16781.0 12 16781.0 13 30897.0 14 45013.0 15 65979.0 16 86945.0 17 71151.0 18 55357.0 19 55357.0 20 59921.0 21 64485.0 22 50516.5 23 36548.0 24 39613.5 25 42679.0 26 42679.0 27 47809.0 28 52939.0 29 56948.0 30 60957.0 31 66289.0 32 71621.0 33 71621.0 34 79653.0 35 87685.0 36 100054.0 37 112423.0 38 124549.0 39 136675.0 40 136675.0 41 151177.0 42 165679.0 43 175994.0 44 186309.0 45 206212.5 46 226116.0 47 226116.0 48 251935.5 49 277755.0 50 272879.0 51 268003.0 52 252888.5 53 237774.0 54 237774.0 55 222697.5 56 207621.0 57 196028.0 58 184435.0 59 166441.5 60 148448.0 61 148448.0 62 124555.5 63 100663.0 64 88054.0 65 75445.0 66 62426.5 67 49408.0 68 49408.0 69 39801.5 70 30195.0 71 25305.0 72 20415.0 73 15060.5 74 9706.0 75 9706.0 76 7418.5 77 5131.0 78 4468.5 79 3806.0 80 2989.5 81 2173.0 82 2173.0 83 1771.5 84 1370.0 85 1263.0 86 1156.0 87 769.0 88 382.0 89 382.0 90 267.0 91 152.0 92 123.5 93 95.0 94 76.5 95 58.0 96 58.0 97 31.0 98 4.0 99 4.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3105073.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.559980381413595 #Duplication Level Percentage of deduplicated Percentage of total 1 82.75013179165464 41.83845039945447 2 8.783828650230664 8.882204084587219 3 3.007876855626471 4.562345844305471 4 1.466741847621344 2.9663375616133396 5 0.8714249673590687 2.2029614626774245 6 0.5809341991809497 1.762321302808862 7 0.4261892488597309 1.5083684042782173 8 0.3033475119455651 1.2269795402174717 9 0.23359044006607227 1.0629295260323743 >10 1.3928876650008755 12.750256201157683 >50 0.09649194725113597 3.3914621309341233 >100 0.0726135050003629 7.607359303100876 >500 0.009464783440767205 3.283555368043782 >1k 0.004156830565093174 3.6080890574028883 >5k 6.395123946297191E-5 0.16742407530520173 >10k+ 2.5580495785188764E-4 3.1789557380806333 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 39713 1.2789715410877618 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 24587 0.7918332354827085 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 17267 0.5560899856460702 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16750 0.5394398134923076 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 5178 0.16675936443362202 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4380 0.1410594855579885 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 4203 0.13535913648406978 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4158 0.13390989519409044 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3759 0.12105995575627368 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3703 0.11925645548429939 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.220536199954075E-5 2 0.0 0.0 0.0 0.0 3.220536199954075E-5 3 0.0 0.0 0.0 0.0 3.220536199954075E-5 4 0.0 0.0 0.0 0.0 3.220536199954075E-5 5 0.0 0.0 0.0 0.0 3.220536199954075E-5 6 0.0 0.0 0.0 0.0 6.44107239990815E-5 7 0.0 0.0 0.0 0.0 6.44107239990815E-5 8 0.0 0.0 0.0 0.0 6.44107239990815E-5 9 0.0 0.0 0.0 3.220536199954075E-5 9.661608599862226E-5 10 0.0 0.0 0.0 6.44107239990815E-5 9.661608599862226E-5 11 0.0 0.0 0.0 9.661608599862226E-5 1.28821447998163E-4 12 0.0 0.0 0.0 1.28821447998163E-4 1.932321719972445E-4 13 0.0 0.0 0.0 2.2543753399678526E-4 1.932321719972445E-4 14 0.0 0.0 0.0 3.2205361999540754E-4 2.8984825799586674E-4 15 0.0 0.0 0.0 6.763126019903558E-4 2.8984825799586674E-4 16 0.0 0.0 0.0 0.0014492412899793337 2.8984825799586674E-4 17 0.0 0.0 0.0 0.0022865807019673934 2.8984825799586674E-4 18 0.0 0.0 0.0 0.0026408396839623415 2.8984825799586674E-4 19 0.0 0.0 0.0 0.0036714112679476457 3.2205361999540754E-4 20 0.0 0.0 0.0 0.00473418821393249 3.2205361999540754E-4 21 0.0 0.0 0.0 0.00640886703790861 3.2205361999540754E-4 22 0.0 0.0 0.0 0.010209099753854417 3.2205361999540754E-4 23 0.0 0.0 0.0 0.015361957673780938 3.86464343994489E-4 24 0.0 0.0 0.0 0.022350521227681282 3.86464343994489E-4 25 0.0 0.0 0.0 0.02537782525563811 3.86464343994489E-4 26 0.0 0.0 0.0 0.03191551374154489 4.1866970599402977E-4 27 0.0 0.0 0.0 0.060288437663140286 4.1866970599402977E-4 28 0.0 0.0 0.0 0.11004572195243074 4.1866970599402977E-4 29 0.0 0.0 0.0 0.1766142052054815 4.1866970599402977E-4 30 0.0 0.0 0.0 0.28562935557392694 4.1866970599402977E-4 31 0.0 0.0 0.0 0.5804050339557234 4.1866970599402977E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1090 0.0 17.990828 5 CAAGACG 1100 0.0 17.659092 4 TAACGTG 75 2.0686946E-4 17.266666 5 CGGACCA 1205 0.0 15.813278 9 GACGGAC 1220 0.0 15.770493 7 ACGGACC 1210 0.0 15.747934 8 CTTATAC 2140 0.0 15.7336445 37 CGCAAGA 1260 0.0 15.416666 2 TACCGTC 655 0.0 15.251908 7 AGACGGA 1375 0.0 15.069091 6 GCGCAAG 1310 0.0 14.828244 1 AGAGCGA 1290 0.0 14.484496 15 TGTGCGA 230 1.8189894E-12 14.478261 10 TAGCCCG 90 8.279603E-4 14.388889 5 ACCGTCG 740 0.0 14.25 8 GTAAGAC 275 0.0 14.127274 3 GAACAGT 2190 0.0 14.1073065 1 CGTTATA 105 1.6570627E-4 14.095239 2 GGACCGT 105 1.6570627E-4 14.095239 6 GACCGTG 450 0.0 13.9777775 7 >>END_MODULE