##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727224.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1551911 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.336889808758364 31.0 30.0 31.0 27.0 34.0 2 30.525037196076322 31.0 30.0 31.0 27.0 34.0 3 30.531870062136296 31.0 30.0 33.0 27.0 34.0 4 34.36874795010797 35.0 35.0 37.0 30.0 37.0 5 34.12183108438564 35.0 33.0 37.0 30.0 37.0 6 34.32518166312372 35.0 35.0 37.0 30.0 37.0 7 34.256440607741034 35.0 35.0 37.0 30.0 37.0 8 34.346084279317566 35.0 35.0 37.0 30.0 37.0 9 35.737178871726535 37.0 35.0 39.0 30.0 39.0 10 35.389903802473206 37.0 34.0 39.0 30.0 39.0 11 35.65801518257168 37.0 35.0 39.0 30.0 39.0 12 35.44968171499526 37.0 35.0 39.0 30.0 39.0 13 35.61826483606341 37.0 35.0 39.0 30.0 39.0 14 36.31491754359625 38.0 35.0 40.0 30.0 41.0 15 36.413321382476184 38.0 35.0 40.0 30.0 41.0 16 36.277615791111735 38.0 35.0 40.0 30.0 41.0 17 36.35140223891705 38.0 35.0 40.0 30.0 41.0 18 36.31100043752509 38.0 35.0 40.0 30.0 41.0 19 36.35302475464121 38.0 35.0 40.0 30.0 41.0 20 36.27430761171227 38.0 34.0 40.0 30.0 41.0 21 36.171449909176495 38.0 34.0 40.0 29.0 41.0 22 36.09705131286523 38.0 34.0 40.0 29.0 41.0 23 35.935971199379345 38.0 34.0 40.0 29.0 41.0 24 35.77270088297589 38.0 34.0 40.0 27.0 41.0 25 35.642361578724554 38.0 34.0 40.0 27.0 41.0 26 35.28800942837572 38.0 34.0 40.0 27.0 41.0 27 35.06581176369006 38.0 33.0 40.0 26.0 41.0 28 34.8344917975322 37.0 33.0 40.0 25.0 41.0 29 34.74025314596005 37.0 33.0 40.0 25.0 41.0 30 34.58577972577036 37.0 33.0 40.0 25.0 41.0 31 34.58395938942375 37.0 33.0 39.0 25.0 40.0 32 34.48295101974276 37.0 33.0 39.0 25.0 40.0 33 34.330516376261265 37.0 33.0 39.0 25.0 41.0 34 34.34229733534977 37.0 33.0 40.0 25.0 41.0 35 34.030440534283215 37.0 33.0 40.0 24.0 41.0 36 33.888978169495545 36.0 32.0 40.0 23.0 41.0 37 33.71395137994382 36.0 32.0 39.0 22.0 41.0 38 33.54405052867078 36.0 32.0 39.0 21.0 41.0 39 33.36350731453028 36.0 31.0 39.0 21.0 41.0 40 33.0244666092321 36.0 31.0 39.0 19.0 40.0 41 32.80971267037865 36.0 31.0 39.0 18.0 40.0 42 32.440376413338136 35.0 30.0 39.0 16.0 40.0 43 32.03362048467986 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 6.0 13 11.0 14 20.0 15 52.0 16 111.0 17 223.0 18 454.0 19 887.0 20 1684.0 21 3181.0 22 5290.0 23 8541.0 24 12876.0 25 18711.0 26 25775.0 27 34443.0 28 44152.0 29 56073.0 30 67479.0 31 80169.0 32 94080.0 33 110344.0 34 129577.0 35 153348.0 36 188736.0 37 223564.0 38 213827.0 39 78295.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.82676132845247 24.171489215554242 14.657799319677482 20.343950136315804 2 22.800598745675494 27.76286784486997 27.742441415777066 21.69409199367747 3 26.371099889104464 25.512674373723748 29.019640945904758 19.096584791267023 4 20.27242541614822 18.78000735866941 30.044377544846324 30.90318968033605 5 14.006408872673756 41.77507601917894 31.255593909702295 12.962921198445013 6 33.92623674940122 35.975709947284344 14.29966022536086 15.798393077953568 7 26.144991562016124 33.92262829505043 21.644153562929834 18.288226580003624 8 29.480749862588766 33.59496775266108 19.932650777009762 16.99163160774039 9 27.540819028926272 12.514699618728137 20.39949455864415 39.54498679370144 10 17.79257960024769 29.431971292168175 31.739320102763624 21.03612900482051 11 35.50364679417827 22.526742835123923 20.186466878577445 21.78314349212036 12 19.950886358818256 29.493186142762053 29.723933911158568 20.831993587261124 13 31.12543180633425 19.52064261417053 26.522977155262122 22.830948424233092 14 22.17975128728387 21.994689128435844 27.678971281213936 28.14658830306635 15 25.628467096373438 28.780516408479613 23.498383605760896 22.092632889386053 16 22.605871084102116 26.308789614868378 27.26412790424193 23.82121139678757 17 22.108484313855627 28.294083874655186 27.615887766759823 21.98154404472937 18 21.641898278960582 24.7213918839418 29.9655714792923 23.67113835780531 19 22.41842476791517 26.74251294049723 30.401163468781395 20.437898822806204 20 22.273893283828777 25.483420118808358 30.504068854463952 21.738617742898917 21 23.062598306217303 26.572915586009767 29.822586475641966 20.541899632130967 22 23.220532620749516 26.75217844322258 29.10211990249441 20.925169033533493 23 21.97142748521017 26.495204944097956 29.960029924396437 21.57333764629544 24 21.59795245990266 27.811259795181552 29.588423562949163 21.00236418196662 25 21.929350330012483 27.105613659546197 29.11371850576483 21.851317504676494 26 21.48667030519147 27.63212581133841 29.810150195468683 21.071053688001438 27 22.054421935278505 27.32637374179318 29.17390236940134 21.445301953526975 28 21.40064733093586 27.804107323164796 30.14457658976578 20.650668756133566 29 21.60188309767764 27.668403664900886 29.885992173520258 20.843721063901217 30 21.33356874202193 28.4466055076612 29.723805037788892 20.496020712527972 31 21.79074702093097 28.33364799914428 29.187885130010677 20.687719849914075 32 21.012094121376805 28.418446676388015 29.20966472948513 21.35979447275005 33 20.715363187708576 28.23989262270839 29.822328728902626 21.222415460680413 34 21.287174328940257 28.348146253232304 29.616389084167842 20.748290333659597 35 21.10391639726763 28.487393929162174 29.957645767057517 20.45104390651268 36 20.69906070644515 28.88361510421667 29.119646680769712 21.29767750856847 37 20.880901031051394 28.82330236721049 29.331192317085193 20.96460428465292 38 20.925169033533493 28.137696040559028 29.530430546597064 21.406704379310412 39 21.03831985210492 28.041427633414546 29.15766432482275 21.762588189657784 40 20.942373628384615 28.339640610834 29.509617497395148 21.208368263386237 41 20.219200714473963 28.411551951110596 29.759309651133343 21.609937683282094 42 20.801515035333857 28.642493029561617 29.2271270710756 21.32886486402893 43 20.44137840378733 27.860424985711163 29.603372873831034 22.094823736670467 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 434.0 1 433.0 2 432.0 3 725.5 4 1019.0 5 1019.0 6 2664.0 7 4309.0 8 4558.5 9 4808.0 10 6703.5 11 8599.0 12 8599.0 13 18114.0 14 27629.0 15 42681.5 16 57734.0 17 45871.5 18 34009.0 19 34009.0 20 40051.5 21 46094.0 22 34989.5 23 23885.0 24 23636.5 25 23388.0 26 23388.0 27 26480.0 28 29572.0 29 31148.5 30 32725.0 31 35274.0 32 37823.0 33 37823.0 34 41629.0 35 45435.0 36 51227.0 37 57019.0 38 62811.0 39 68603.0 40 68603.0 41 75141.5 42 81680.0 43 86763.5 44 91847.0 45 99511.0 46 107175.0 47 107175.0 48 117257.0 49 127339.0 50 124120.5 51 120902.0 52 115077.5 53 109253.0 54 109253.0 55 103763.0 56 98273.0 57 93125.5 58 87978.0 59 79927.5 60 71877.0 61 71877.0 62 61186.5 63 50496.0 64 43750.5 65 37005.0 66 31118.5 67 25232.0 68 25232.0 69 20513.5 70 15795.0 71 13092.5 72 10390.0 73 7851.5 74 5313.0 75 5313.0 76 4157.5 77 3002.0 78 2502.0 79 2002.0 80 1579.5 81 1157.0 82 1157.0 83 900.0 84 643.0 85 631.0 86 619.0 87 415.0 88 211.0 89 211.0 90 149.5 91 88.0 92 77.5 93 67.0 94 53.0 95 39.0 96 39.0 97 22.5 98 6.0 99 5.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1551911.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.96165331663299 #Duplication Level Percentage of deduplicated Percentage of total 1 86.200543789113 49.10125491020695 2 7.2641565943643736 8.275567391318337 3 2.3637603560268268 4.039310937708032 4 1.203013317966599 2.7410251021322307 5 0.6951454228786523 1.9798316291329017 6 0.442028662931859 1.5107210072363624 7 0.3291859715580034 1.3125684032010196 8 0.22589948654688186 1.0294086589671105 9 0.1690385909106908 0.8665845851328225 >10 0.9524487961450969 9.764505616068593 >50 0.07745457388816515 3.07726887674129 >100 0.0684549558279926 7.774351552638202 >500 0.00636783311726673 2.5319959862985195 >1k 0.0020468035019785918 1.9032557381851496 >5k 1.1371130566547733E-4 0.519534926353903 >10k+ 3.4113391699643194E-4 3.57281467867863 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 26168 1.686179168779653 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17877 1.1519346148071636 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11115 0.7162137519484042 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8021 0.5168466490668602 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 3751 0.2417020048185753 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3185 0.20523084120158955 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2097 0.1351237281003872 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2048 0.13196633054343967 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1932 0.12449167510250267 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 1818 0.11714589303123697 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 1592 0.10258320225837693 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.288733696713278E-4 2 0.0 0.0 0.0 0.0 1.288733696713278E-4 3 0.0 0.0 0.0 0.0 1.288733696713278E-4 4 0.0 0.0 0.0 0.0 1.288733696713278E-4 5 0.0 0.0 0.0 0.0 1.288733696713278E-4 6 0.0 0.0 0.0 6.44366848356639E-5 1.288733696713278E-4 7 0.0 0.0 0.0 6.44366848356639E-5 1.288733696713278E-4 8 0.0 0.0 0.0 6.44366848356639E-5 1.288733696713278E-4 9 0.0 0.0 0.0 6.44366848356639E-5 1.288733696713278E-4 10 0.0 0.0 0.0 6.44366848356639E-5 1.288733696713278E-4 11 0.0 0.0 0.0 6.44366848356639E-5 1.288733696713278E-4 12 0.0 0.0 0.0 6.44366848356639E-5 1.288733696713278E-4 13 0.0 0.0 0.0 6.44366848356639E-5 1.288733696713278E-4 14 0.0 0.0 0.0 3.866201090139834E-4 1.933100545069917E-4 15 0.0 0.0 0.0 8.376769028636307E-4 1.933100545069917E-4 16 0.0 0.0 0.0 0.0023197206540839003 1.933100545069917E-4 17 0.0 0.0 0.0 0.003866201090139834 1.933100545069917E-4 18 0.0 0.0 0.0 0.004381694568825145 1.933100545069917E-4 19 0.0 0.0 0.0 0.00612148505938807 1.933100545069917E-4 20 0.0 0.0 0.0 0.008119022289293652 2.577467393426556E-4 21 0.0 0.0 0.0 0.013660577185160746 2.577467393426556E-4 22 0.0 0.0 0.0 0.02364826333468865 2.577467393426556E-4 23 0.0 0.0 0.0 0.03479580981125851 3.866201090139834E-4 24 0.0 0.0 0.0 0.05238702477139475 3.866201090139834E-4 25 0.0 0.0 0.0 0.06031273700618141 3.866201090139834E-4 26 0.0 0.0 0.0 0.07384444082167083 3.866201090139834E-4 27 0.0 0.0 0.0 0.09936136801659373 3.866201090139834E-4 28 0.0 0.0 0.0 0.14723782484949202 3.866201090139834E-4 29 0.0 0.0 0.0 0.19685407217295323 3.866201090139834E-4 30 0.0 0.0 0.0 0.2784309151749037 3.866201090139834E-4 31 0.0 0.0 0.0 0.4657483579921787 3.866201090139834E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACACCG 70 5.103824E-6 21.142857 5 GCGTCGG 45 0.0038264021 20.555557 29 CCGTTGC 45 0.0038264021 20.555557 1 CGTTACA 60 9.238805E-4 18.5 24 CGTACGC 50 0.0070359637 18.5 3 CGGACCG 70 1.21954654E-4 18.5 21 CGAGCGT 65 0.0015802713 17.076923 16 TAATACC 135 2.2208042E-8 16.444445 4 AAGACGG 385 0.0 16.337664 5 TCGTTAC 125 1.6587E-7 16.279999 23 TACGCTG 80 3.38352E-4 16.1875 5 CGACGTC 70 0.0025930423 15.857142 36 ATACCGT 320 0.0 15.609376 6 GTTACAC 215 0.0 15.488372 3 AACCGGG 85 5.365653E-4 15.235294 7 CGATAAC 245 0.0 15.10204 10 CAAGACG 470 0.0 14.957446 4 CCGATAA 260 0.0 14.942307 9 TAAGACT 175 2.239176E-9 14.8 4 CGAACGA 250 0.0 14.799999 16 >>END_MODULE