##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727223.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3587562 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.201864943379377 31.0 31.0 34.0 30.0 34.0 2 31.44297715272935 31.0 31.0 34.0 30.0 34.0 3 31.600124820142483 31.0 31.0 34.0 30.0 34.0 4 35.404463811357125 37.0 35.0 37.0 33.0 37.0 5 35.21988498038501 37.0 35.0 37.0 33.0 37.0 6 35.21785435345787 37.0 35.0 37.0 32.0 37.0 7 35.11699003390046 37.0 35.0 37.0 32.0 37.0 8 35.12520508356371 37.0 35.0 37.0 32.0 37.0 9 36.69396124722026 39.0 35.0 39.0 32.0 39.0 10 36.41095624270744 38.0 35.0 39.0 32.0 39.0 11 36.58084375963398 39.0 35.0 39.0 32.0 39.0 12 36.429294601737894 38.0 35.0 39.0 32.0 39.0 13 36.49571603222467 38.0 35.0 39.0 32.0 39.0 14 37.50362112208793 39.0 36.0 41.0 32.0 41.0 15 37.502343095394586 39.0 36.0 41.0 32.0 41.0 16 37.43983602234609 39.0 36.0 41.0 32.0 41.0 17 37.42001197470594 39.0 36.0 41.0 32.0 41.0 18 37.3496814828566 39.0 36.0 41.0 32.0 41.0 19 37.37566653900337 39.0 36.0 41.0 32.0 41.0 20 37.27927517350223 39.0 36.0 41.0 31.0 41.0 21 37.180844818849124 39.0 36.0 40.0 31.0 41.0 22 37.11622070921701 39.0 36.0 40.0 31.0 41.0 23 37.00804278783196 39.0 36.0 40.0 31.0 41.0 24 36.87518738352118 39.0 36.0 40.0 30.0 41.0 25 36.73437030495919 39.0 35.0 40.0 30.0 41.0 26 36.50848459204329 38.0 35.0 40.0 30.0 41.0 27 36.345354310253036 38.0 35.0 40.0 30.0 41.0 28 36.10106557043474 38.0 35.0 40.0 29.0 41.0 29 36.04911524873995 38.0 35.0 40.0 29.0 41.0 30 35.96257653526266 38.0 34.0 40.0 29.0 41.0 31 36.09217429552437 38.0 35.0 40.0 29.0 41.0 32 36.063757225659096 38.0 35.0 40.0 29.0 41.0 33 36.06444599424344 38.0 35.0 40.0 29.0 41.0 34 36.10795910983559 38.0 35.0 40.0 29.0 41.0 35 35.90097118879061 38.0 34.0 40.0 28.0 41.0 36 35.84320661217841 38.0 34.0 40.0 28.0 41.0 37 35.77680134865962 38.0 34.0 40.0 27.0 41.0 38 35.67555431794628 38.0 34.0 40.0 27.0 41.0 39 35.59502943781877 38.0 34.0 40.0 27.0 41.0 40 35.419276377662605 38.0 34.0 40.0 26.0 41.0 41 35.340500874967454 38.0 34.0 40.0 26.0 41.0 42 35.13553884225555 38.0 33.0 40.0 25.0 41.0 43 34.779491476384244 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 2.0 14 3.0 15 17.0 16 53.0 17 125.0 18 276.0 19 559.0 20 1212.0 21 2427.0 22 4546.0 23 8126.0 24 13665.0 25 21150.0 26 31457.0 27 45096.0 28 63092.0 29 83863.0 30 107481.0 31 134573.0 32 165332.0 33 201103.0 34 245426.0 35 298410.0 36 366722.0 37 469721.0 38 638640.0 39 684483.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.73183292720795 18.663677450034314 12.348748258566681 26.25574136419106 2 18.11631408739417 22.353815766807653 34.01647135296895 25.51339879282922 3 20.03065034137389 24.032755392101933 30.40410172702242 25.532492539501757 4 14.7127492152052 15.410409631945038 34.353664131797586 35.523177021052184 5 14.23359373301423 38.201932119918766 33.21247131060034 14.35200283646666 6 34.65835573015881 34.6830521674608 15.862555127967127 14.796036974413266 7 28.41155079689215 32.30547653253101 20.891820127429156 18.391152543147687 8 28.563938407196865 33.21860360880174 20.04288706369395 18.17457092030744 9 29.11208224415355 12.98656301967743 18.507192349567756 39.39416238660126 10 16.897519819866528 26.764861485320672 32.32574099067835 24.011877704134452 11 37.08000028989046 21.77559579458139 20.434517926101346 20.7098859894268 12 21.91649928279985 25.155495570529514 28.959583137517903 23.968422009152736 13 30.739454816390634 18.97982529639906 24.6530094810905 25.627710406119807 14 22.976578523242246 20.4975691012448 25.013226252257105 31.51262612325585 15 26.53885842251646 27.23091614862684 22.069137759849166 24.161087669007532 16 24.575240790263695 25.875984861028183 24.903653233031235 24.645121115676886 17 24.291844991110956 25.525691263314755 25.072570174396986 25.109893571177306 18 24.0485599970119 24.989226667023452 26.731050222964786 24.23116311299986 19 24.93816134745546 25.30523514297453 26.803216223162135 22.95338728640787 20 24.17354738398946 24.04449038093279 26.364255168273047 25.417707066804702 21 24.824295719488614 25.38916400608547 26.94188978476191 22.844650489664012 22 25.46827065288349 24.229992401525045 25.274991763208554 25.02674518238291 23 23.649012895108154 24.915806333103095 26.53278187248053 24.90239889930822 24 23.465740801134586 25.193153456302635 26.57554071539391 24.76556502716887 25 24.681413171396063 24.028908768684694 25.596798048368225 25.692880011551022 26 23.7723278371217 25.278336653136584 26.741001270500693 24.208334239241022 27 25.536450659249933 24.98256476125012 25.367282851139578 24.113701728360372 28 23.476583819317966 26.435250456995586 25.601146405274665 24.48701931841178 29 23.910416042984064 25.903357210272603 26.493590912157057 23.692635834586273 30 24.987526347976704 25.71473329241418 25.868514606855577 23.429225752753542 31 24.524955945012238 25.585676289357508 25.8546054395715 24.034762326058758 32 23.719227709514147 25.768781138834672 25.57212948514897 24.939861666502207 33 23.29885866780839 25.041852935224533 26.32941256485602 25.329875832111053 34 24.37621983954563 25.4340412792866 26.921764697028234 23.267974184139536 35 24.316931665571214 25.184512490655216 26.752680511166076 23.74587533260749 36 23.42314920271761 25.60964800050842 26.82941786093174 24.137784935842223 37 23.66361891446057 25.513426666911958 27.217871077907503 23.605083340719965 38 23.970596187605956 24.75717492826605 26.727259347713016 24.544969536414982 39 23.19413573897817 24.91168096885852 27.358523699381365 24.53565959278195 40 24.29613759985193 24.386226635247002 27.4520691210354 23.86556664386567 41 22.65513460115811 25.192456604234298 27.916256220798413 24.23615257380918 42 23.395191497735787 25.01821571306642 27.756704971231162 23.82988781796663 43 22.521255381788524 23.986317170267718 27.642337609775108 25.85008983816865 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 507.0 1 625.0 2 743.0 3 1567.5 4 2392.0 5 2392.0 6 3676.0 7 4960.0 8 4760.5 9 4561.0 10 5884.0 11 7207.0 12 7207.0 13 12858.0 14 18509.0 15 29863.0 16 41217.0 17 36640.5 18 32064.0 19 32064.0 20 33450.5 21 34837.0 22 28878.0 23 22919.0 24 27103.5 25 31288.0 26 31288.0 27 36488.5 28 41689.0 29 47481.0 30 53273.0 31 59451.0 32 65629.0 33 65629.0 34 76230.5 35 86832.0 36 103261.0 37 119690.0 38 136485.5 39 153281.0 40 153281.0 41 170671.5 42 188062.0 43 201278.5 44 214495.0 45 240589.5 46 266684.0 47 266684.0 48 305074.5 49 343465.0 50 352575.5 51 361686.0 52 339929.5 53 318173.0 54 318173.0 55 301278.0 56 284383.0 57 268861.5 58 253340.0 59 230989.0 60 208638.0 61 208638.0 62 175206.0 63 141774.0 64 123861.5 65 105949.0 66 88152.0 67 70355.0 68 70355.0 69 57365.5 70 44376.0 71 36795.5 72 29215.0 73 21803.0 74 14391.0 75 14391.0 76 11224.0 77 8057.0 78 6802.0 79 5547.0 80 4407.0 81 3267.0 82 3267.0 83 2592.0 84 1917.0 85 1651.0 86 1385.0 87 917.0 88 449.0 89 449.0 90 318.5 91 188.0 92 136.0 93 84.0 94 82.5 95 81.0 96 81.0 97 41.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3587562.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.745346703854715 #Duplication Level Percentage of deduplicated Percentage of total 1 79.92830934001226 37.36276531551822 2 9.915250098061914 9.269836069786672 3 3.414601905044714 4.788502497208738 4 1.749358138474857 3.270974107688683 5 1.0495296536405956 2.45303137677031 6 0.7074049294240519 1.984073321156591 7 0.5069916333557524 1.6589649774017767 8 0.40109755133916347 1.499955527953309 9 0.30575697946386615 1.2863444410945628 >10 1.8007117328172524 15.453992305469185 >50 0.12244733571239745 3.944151948366387 >100 0.08123074200319476 7.728450511053331 >500 0.012099003640090165 3.8897082548867568 >1k 0.004971372779554465 3.8579018208727183 >5k 5.9896057584993554E-5 0.19151055929551264 >10k+ 1.7968817275498065E-4 1.3598369654772597 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 21115 0.5885612569204379 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 14396 0.40127529503322873 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13057 0.36395189825290825 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6840 0.1906587258979775 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 3949 0.11007475271507504 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 3940 0.10982388597047243 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 3739 0.1042211953410143 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.7874082733622444E-5 2 0.0 0.0 0.0 0.0 2.7874082733622444E-5 3 0.0 0.0 0.0 0.0 2.7874082733622444E-5 4 0.0 0.0 0.0 0.0 2.7874082733622444E-5 5 0.0 0.0 0.0 0.0 2.7874082733622444E-5 6 0.0 0.0 0.0 0.0 5.574816546724489E-5 7 0.0 0.0 0.0 0.0 5.574816546724489E-5 8 0.0 0.0 0.0 0.0 5.574816546724489E-5 9 0.0 0.0 0.0 0.0 5.574816546724489E-5 10 0.0 0.0 0.0 0.0 8.362224820086734E-5 11 0.0 0.0 0.0 0.0 8.362224820086734E-5 12 0.0 0.0 0.0 2.7874082733622444E-5 8.362224820086734E-5 13 0.0 0.0 0.0 2.7874082733622444E-5 8.362224820086734E-5 14 0.0 0.0 0.0 1.393704136681122E-4 1.951185791353571E-4 15 0.0 0.0 0.0 2.2299266186897955E-4 2.50866744602602E-4 16 0.0 0.0 0.0 7.52600233807806E-4 3.066149100698469E-4 17 0.0 0.0 0.0 0.00125433372301301 3.3448899280346935E-4 18 0.0 0.0 0.0 0.0015330745503492344 3.902371582707142E-4 19 0.0 0.0 0.0 0.0018675635431527036 3.902371582707142E-4 20 0.0 0.0 0.0 0.002369297032357908 3.902371582707142E-4 21 0.0 0.0 0.0 0.003930245665440765 3.902371582707142E-4 22 0.0 0.0 0.0 0.0063552908632659175 3.902371582707142E-4 23 0.0 0.0 0.0 0.010229788363239437 4.738594064715815E-4 24 0.0 0.0 0.0 0.014410900773282803 4.738594064715815E-4 25 0.0 0.0 0.0 0.016445708812837242 4.738594064715815E-4 26 0.0 0.0 0.0 0.020013591402740914 4.738594064715815E-4 27 0.0 0.0 0.0 0.03581819631270484 4.738594064715815E-4 28 0.0 0.0 0.0 0.0650859831830084 4.738594064715815E-4 29 0.0 0.0 0.0 0.10416544717554707 4.738594064715815E-4 30 0.0 0.0 0.0 0.16769048172547263 4.738594064715815E-4 31 0.0 0.0 0.0 0.396230086058443 4.738594064715815E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATCCC 1040 0.0 16.899038 5 AAGACGG 1010 0.0 16.668318 5 TATACCG 190 1.8189894E-12 16.552631 5 CTTATAC 1835 0.0 16.231607 37 ACGCGTA 70 0.002593931 15.857143 6 TTAATCC 1260 0.0 15.563492 4 TAGTACT 245 0.0 15.10204 4 TCTTATA 2965 0.0 14.912311 37 ACGGATG 2205 0.0 14.5986395 28 CCCTATA 140 6.004593E-7 14.535715 2 CAAGACG 1240 0.0 14.471775 4 TACGGAT 2180 0.0 14.426605 27 TACTTAC 1315 0.0 14.34981 31 CCTATAC 310 0.0 14.322581 3 GGGCGTC 1170 0.0 14.072649 11 TAATACC 240 5.456968E-12 13.874999 4 GTACCGT 120 3.304198E-5 13.874999 6 GTTACGG 1775 0.0 13.861973 25 ATACCGG 135 6.5757977E-6 13.703704 6 ACGGACC 1245 0.0 13.670683 8 >>END_MODULE