##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727222.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2446817 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.618227272411463 31.0 30.0 31.0 27.0 34.0 2 30.853499873509133 31.0 31.0 33.0 27.0 34.0 3 30.957896319994507 31.0 31.0 34.0 27.0 34.0 4 34.82273664111374 35.0 35.0 37.0 32.0 37.0 5 34.598605044839886 35.0 35.0 37.0 31.0 37.0 6 34.67072813373456 35.0 35.0 37.0 31.0 37.0 7 34.600362838741106 35.0 35.0 37.0 30.0 37.0 8 34.63069408133097 35.0 35.0 37.0 30.0 37.0 9 36.109612610996244 38.0 35.0 39.0 31.0 39.0 10 35.78544124877341 37.0 35.0 39.0 30.0 39.0 11 35.99379643021934 37.0 35.0 39.0 30.0 39.0 12 35.80610769011332 37.0 35.0 39.0 30.0 39.0 13 35.920494667153285 37.0 35.0 39.0 30.0 39.0 14 36.76120568068638 38.0 36.0 40.0 31.0 41.0 15 36.78969330358584 38.0 36.0 40.0 31.0 41.0 16 36.70345555061944 38.0 36.0 40.0 31.0 41.0 17 36.70783307456177 38.0 36.0 40.0 31.0 41.0 18 36.6395958504457 38.0 35.0 40.0 30.0 41.0 19 36.66386370537723 38.0 35.0 40.0 30.0 41.0 20 36.5665446169452 38.0 35.0 40.0 30.0 41.0 21 36.45832974022986 38.0 35.0 40.0 30.0 41.0 22 36.37247084681854 38.0 35.0 40.0 30.0 41.0 23 36.23437592594787 38.0 34.0 40.0 29.0 41.0 24 36.08040813841002 38.0 34.0 40.0 29.0 41.0 25 35.94852782206434 38.0 34.0 40.0 28.0 41.0 26 35.64239867550373 38.0 34.0 40.0 27.0 41.0 27 35.444929064985246 38.0 34.0 40.0 27.0 41.0 28 35.19707440319403 38.0 33.0 40.0 26.0 41.0 29 35.12505144438673 38.0 33.0 40.0 26.0 41.0 30 35.018774187035646 38.0 33.0 40.0 26.0 41.0 31 35.119280273105836 38.0 33.0 40.0 26.0 41.0 32 35.07735846203455 38.0 33.0 40.0 26.0 41.0 33 35.016876211012104 38.0 33.0 40.0 26.0 41.0 34 35.06275990398955 38.0 33.0 40.0 26.0 41.0 35 34.80637579353094 38.0 33.0 40.0 25.0 41.0 36 34.719870754535386 37.0 33.0 40.0 25.0 41.0 37 34.60725751047177 37.0 33.0 40.0 24.0 41.0 38 34.48994183054965 37.0 33.0 40.0 24.0 41.0 39 34.37266007224897 37.0 33.0 40.0 24.0 41.0 40 34.117849843286194 37.0 33.0 40.0 23.0 41.0 41 33.999969347932435 37.0 32.0 40.0 23.0 41.0 42 33.73192355619566 37.0 32.0 40.0 22.0 41.0 43 33.364979072811735 36.0 31.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 5.0 14 8.0 15 38.0 16 92.0 17 183.0 18 366.0 19 829.0 20 1772.0 21 3354.0 22 6063.0 23 9924.0 24 15694.0 25 23620.0 26 33126.0 27 45572.0 28 59857.0 29 76223.0 30 94334.0 31 113550.0 32 135145.0 33 159993.0 34 189837.0 35 224965.0 36 274624.0 37 341311.0 38 418735.0 39 217594.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.857782580389134 22.53119052221723 14.521314834742444 23.08971206265119 2 20.576855563779393 25.283255756356116 31.03730274883655 23.102585931027946 3 22.84155292365551 25.127011950628102 29.98892029931131 22.04251482640508 4 17.321524249668037 17.936731680383126 32.75124375872818 31.99050031122066 5 14.098765866021038 39.71915349615439 32.64788498690339 13.534195650921177 6 33.76823849106819 36.33250872460017 15.134192708322692 14.765060076008954 7 27.417170961293795 32.9782325363932 21.178984779000636 18.425611723312368 8 28.559185259870272 33.82422960115121 19.77066531743077 17.84591982154775 9 27.837022548069594 13.065954666818156 19.46357246986595 39.6334503152463 10 17.045819119288446 28.258222825818198 32.39384065093548 22.302117403957876 11 36.419683204751315 22.37584584380442 20.530141812812317 20.674329138631943 12 20.835313797476477 27.102639878666857 29.419077928590493 22.642968395266177 13 30.787958396561738 19.661911781714775 25.259510621350106 24.290619200373385 14 22.514188842075235 21.202035133808536 26.139960610049712 30.143815414066523 15 25.67409005250495 28.34911642350041 22.669410912217792 23.307382611776852 16 23.749303687198513 26.463278618711577 25.684716102593697 24.102701591496217 17 23.15583878974194 27.151070145417496 26.28725401204912 23.40583705279144 18 22.876087586443937 25.157091846263942 28.11967548043029 23.84714508686183 19 23.62689976406082 26.312470446298192 28.238809849694523 21.82181993994647 20 23.384421474920273 24.908769229574588 28.06683131595048 23.639977979554665 21 24.176716117306686 25.959889930468847 27.771794948294048 22.091599003930412 22 24.37199022239914 25.697794318087542 26.9154170499878 23.01479840952552 23 22.91720222640271 25.802256564344617 27.710122988355895 23.570418220896784 24 22.819279087892554 26.58466080626381 27.53360794861242 23.06245215723121 25 23.621586739016447 25.50452281474258 27.021309726064512 23.85258072017646 26 22.903797055521522 26.520741028037655 27.68523350949417 22.890228406946658 27 24.11038504309885 26.160027496948075 26.88926061900011 22.840326840952958 28 22.937105635607402 26.779730564239173 27.667332702036973 22.615831098116452 29 23.04083223224295 26.758601072331935 27.79366008982282 22.4069066056023 30 23.24468891625324 27.07059825070694 27.379979785983178 22.304733047056647 31 23.297206125345703 26.94619172582175 27.093076433586983 22.663525715245562 32 22.753969749270176 26.961272543063092 27.02376189146961 23.260995816197124 33 22.419494388015124 26.681603078611925 27.514848883263436 23.38405365010951 34 23.15040315642731 26.808339160631956 27.83739037288036 22.203867310060378 35 23.075244286761126 26.60930506858502 28.0503200688895 22.26513057576435 36 22.27882183260947 27.05727481867258 27.605824219792492 23.058079128925456 37 22.45697164928967 26.972675112196786 27.854310314175518 22.71604292433803 38 22.610804159036004 26.03370010916223 27.97107425688149 23.384421474920273 39 22.480798523142514 26.05274526047514 28.177914408801314 23.288541807581034 40 22.586119027291375 25.93614479546284 28.534336650431968 22.943399526813817 41 21.653887479120833 26.128149346681834 28.96346559632371 23.25449757787362 42 22.10553547731604 26.1900665231605 28.72090556833633 22.98349243118713 43 21.585472064318665 25.25869323288174 28.912746641861652 24.243088060937946 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1296.0 1 1119.0 2 942.0 3 1272.5 4 1603.0 5 1603.0 6 3055.5 7 4508.0 8 4554.0 9 4600.0 10 6325.5 11 8051.0 12 8051.0 13 15736.0 14 23421.0 15 36793.0 16 50165.0 17 41326.0 18 32487.0 19 32487.0 20 36167.5 21 39848.0 22 32295.0 23 24742.0 24 27814.0 25 30886.0 26 30886.0 27 35060.5 28 39235.0 29 43133.5 30 47032.0 31 51637.5 32 56243.0 33 56243.0 34 63150.0 35 70057.0 36 80570.0 37 91083.0 38 101931.5 39 112780.0 40 112780.0 41 124470.0 42 136160.0 43 144923.5 44 153687.0 45 168165.0 46 182643.0 47 182643.0 48 200394.0 49 218145.0 50 215862.5 51 213580.0 52 204035.0 53 194490.0 54 194490.0 55 183262.5 56 172035.0 57 162177.0 58 152319.0 59 139095.0 60 125871.0 61 125871.0 62 106811.5 63 87752.0 64 76124.5 65 64497.0 66 53802.0 67 43107.0 68 43107.0 69 34879.5 70 26652.0 71 21766.0 72 16880.0 73 12661.0 74 8442.0 75 8442.0 76 6502.0 77 4562.0 78 3791.5 79 3021.0 80 2368.0 81 1715.0 82 1715.0 83 1351.5 84 988.0 85 872.5 86 757.0 87 523.5 88 290.0 89 290.0 90 208.0 91 126.0 92 92.0 93 58.0 94 54.0 95 50.0 96 50.0 97 29.0 98 8.0 99 5.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2446817.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.879250895326436 #Duplication Level Percentage of deduplicated Percentage of total 1 82.50382679791886 43.62740557071709 2 8.809365563878783 9.3166530376199 3 3.0594943404583987 4.853513065257928 4 1.5544867816624988 3.2880038616399916 5 0.8879498626972312 2.347706178601878 6 0.5940507372093391 1.8847774786467764 7 0.4182206622294318 1.548063672934779 8 0.33200932325664195 1.4045123443260406 9 0.2551031150520222 1.2140695462513689 >10 1.422408478182392 13.551005784837116 >50 0.089816019321068 3.2767918732533254 >100 0.06355243378420482 6.820835240048149 >500 0.0067622555069982715 2.3668295834382613 >1k 0.0026427205429645387 2.086640692749552 >5k 7.772707479307467E-5 0.3540482770119887 >10k+ 2.3318122437922405E-4 2.0591437926658487 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 24356 0.9954156767751736 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15454 0.6315960695058109 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10289 0.4205054975504911 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8614 0.35204921332490335 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 2867 0.11717263694015531 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 2843 0.11619177077811704 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2457 0.10041617333866816 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 8.173884683652271E-5 0.0 13 0.0 0.0 0.0 8.173884683652271E-5 0.0 14 0.0 0.0 0.0 8.173884683652271E-5 8.173884683652271E-5 15 0.0 0.0 0.0 3.6782481076435224E-4 8.173884683652271E-5 16 0.0 0.0 0.0 8.173884683652272E-4 1.2260827025478406E-4 17 0.0 0.0 0.0 0.0012260827025478407 1.2260827025478406E-4 18 0.0 0.0 0.0 0.0013078215493843633 1.2260827025478406E-4 19 0.0 0.0 0.0 0.0020026017474948066 1.2260827025478406E-4 20 0.0 0.0 0.0 0.0025747736753504655 1.2260827025478406E-4 21 0.0 0.0 0.0 0.0037191175310617836 1.2260827025478406E-4 22 0.0 0.0 0.0 0.005885196972229636 1.2260827025478406E-4 23 0.0 0.0 0.0 0.008541709494416624 2.452165405095681E-4 24 0.0 0.0 0.0 0.011729524521041009 2.860859639278295E-4 25 0.0 0.0 0.0 0.013159954340680157 2.860859639278295E-4 26 0.0 0.0 0.0 0.01687907187174194 3.2695538734609083E-4 27 0.0 0.0 0.0 0.034902487599195196 3.2695538734609083E-4 28 0.0 0.0 0.0 0.06653542132492948 3.2695538734609083E-4 29 0.0 0.0 0.0 0.10765006128370042 3.2695538734609083E-4 30 0.0 0.0 0.0 0.18325849460748392 3.2695538734609083E-4 31 0.0 0.0 0.0 0.4187072429200876 3.2695538734609083E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 665 0.0 17.526316 5 ACGTTAT 75 2.0684679E-4 17.266666 13 CAAGACG 715 0.0 16.81818 4 CTTATAC 1195 0.0 16.25523 37 CCGATAA 485 0.0 16.020618 9 TTAGTAC 130 2.59226E-7 15.653846 3 AACGTTA 95 7.064883E-5 15.578948 12 ACGAACG 500 0.0 15.54 15 CGAACGA 505 0.0 15.386139 16 GGGTAAG 1350 0.0 15.074074 1 ATAACGA 520 0.0 14.942307 12 AACCGAG 100 1.0941652E-4 14.8 7 GACGGAC 775 0.0 14.799999 7 ACGGACC 795 0.0 14.660378 8 CGATAAC 530 0.0 14.6603775 10 TCGTTAC 505 0.0 14.653466 23 TCTTATA 1925 0.0 14.607793 37 ATACCGT 545 0.0 14.59633 6 CCCGTAA 140 6.0023194E-7 14.535715 1 GCACCCG 1360 0.0 14.419118 9 >>END_MODULE