##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727220.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4463056 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.199168686209628 31.0 31.0 34.0 30.0 34.0 2 31.42919896142912 31.0 31.0 34.0 30.0 34.0 3 31.580911375523858 31.0 31.0 34.0 30.0 34.0 4 35.398141766538444 37.0 35.0 37.0 33.0 37.0 5 35.213113391362334 37.0 35.0 37.0 33.0 37.0 6 35.212460027389305 37.0 35.0 37.0 32.0 37.0 7 35.11129660931881 37.0 35.0 37.0 32.0 37.0 8 35.11836329187893 37.0 35.0 37.0 32.0 37.0 9 36.67918798240488 39.0 35.0 39.0 32.0 39.0 10 36.412005809472255 38.0 35.0 39.0 32.0 39.0 11 36.56667202921048 38.0 35.0 39.0 32.0 39.0 12 36.42176257703242 38.0 35.0 39.0 32.0 39.0 13 36.48352406960612 38.0 35.0 39.0 32.0 39.0 14 37.487874900068476 39.0 36.0 41.0 32.0 41.0 15 37.481246930354445 39.0 36.0 41.0 32.0 41.0 16 37.42752835725118 39.0 36.0 41.0 32.0 41.0 17 37.420049625189556 39.0 36.0 41.0 32.0 41.0 18 37.35208901703228 39.0 36.0 41.0 32.0 41.0 19 37.370845447603614 39.0 36.0 41.0 31.0 41.0 20 37.29489726322054 39.0 36.0 41.0 31.0 41.0 21 37.191108513986826 39.0 36.0 40.0 31.0 41.0 22 37.12837212887313 39.0 36.0 40.0 31.0 41.0 23 37.015199898903354 39.0 36.0 40.0 31.0 41.0 24 36.886029886248345 39.0 36.0 40.0 30.0 41.0 25 36.75832590942171 39.0 35.0 40.0 30.0 41.0 26 36.525132106789606 38.0 35.0 40.0 30.0 41.0 27 36.35566459394639 38.0 35.0 40.0 30.0 41.0 28 36.14037287455053 38.0 35.0 40.0 29.0 41.0 29 36.07391146335605 38.0 35.0 40.0 29.0 41.0 30 35.97486699696351 38.0 34.0 40.0 29.0 41.0 31 36.089377323520026 38.0 35.0 40.0 30.0 41.0 32 36.05495337723748 38.0 35.0 40.0 29.0 41.0 33 36.03982472996081 38.0 35.0 40.0 29.0 41.0 34 36.077900882265425 38.0 35.0 40.0 29.0 41.0 35 35.86092377061816 38.0 34.0 40.0 28.0 41.0 36 35.8082867434332 38.0 34.0 40.0 27.0 41.0 37 35.72186098493947 38.0 34.0 40.0 27.0 41.0 38 35.60852093274205 38.0 34.0 40.0 27.0 41.0 39 35.52343932050147 38.0 34.0 40.0 27.0 41.0 40 35.31937757446915 38.0 34.0 40.0 26.0 41.0 41 35.23070066788317 38.0 34.0 40.0 26.0 41.0 42 35.010247238663375 38.0 33.0 40.0 25.0 41.0 43 34.64173180887715 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 5.0 14 13.0 15 29.0 16 70.0 17 184.0 18 338.0 19 722.0 20 1619.0 21 3252.0 22 5923.0 23 10528.0 24 17263.0 25 27041.0 26 39819.0 27 57170.0 28 79344.0 29 104876.0 30 134965.0 31 167886.0 32 205804.0 33 249399.0 34 306434.0 35 370722.0 36 455624.0 37 589576.0 38 785676.0 39 848771.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.96468608056901 18.874040567718623 12.481358064967143 25.679915286745224 2 18.04252512179995 22.875334748208402 33.739796229310144 25.342343900681506 3 20.15058740020291 24.49953574411793 30.22619478671117 25.12368206896799 4 14.653255527154489 15.643361857883924 34.05332579290961 35.65005682205197 5 14.20204003714047 38.24675289756615 33.08040499603859 14.470802069254788 6 34.51619249231916 34.85967910776831 15.814746666857864 14.80938173305466 7 28.355682742945643 32.05507616305957 21.03453328840149 18.5547078055933 8 28.785209058546428 32.90908740558039 19.94857335422186 18.357130181651318 9 28.661078866140148 12.939900373197199 18.819347102075348 39.579673658587296 10 16.958850617155598 27.113215697943293 32.08637758522411 23.841556099676993 11 36.80390745713251 22.09436762612882 20.33319770130601 20.768527215432655 12 21.98509272570185 25.745744619830003 28.857894680237038 23.41126797423111 13 30.88753535693928 19.059294797107633 24.57820381370971 25.47496603224338 14 23.106544036194034 20.671284429323762 25.152003470267907 31.0701680642143 15 26.23953183648155 27.295086595373213 22.205076521558322 24.260305046586915 16 24.468592820704018 25.82871467442936 25.02957614692713 24.67311635793949 17 24.13017000010755 25.914351063486546 25.38375050637949 24.571728430026422 18 24.013030533338593 24.53534080683729 27.181957833376952 24.26967082644717 19 24.520754388920952 25.548749556357798 27.165556515535545 22.764939539185704 20 24.074423444384298 24.40312198636988 26.809231163579394 24.713223405666433 21 24.898970570837562 25.441222337340154 26.83264561323004 22.82716147859225 22 25.100670930411805 24.752434206516792 25.605325140441888 24.541569722629518 23 23.464684288075254 25.085389921166122 26.62045916519981 24.829466625558812 24 23.46750746573648 25.82703421153577 26.479546750029577 24.22591157269817 25 24.35044507619891 24.568882846193283 25.772363152064415 25.308308925543393 26 23.739047863168196 25.74505002850065 26.67479413209245 23.841107976238703 27 24.943334791228253 25.4431492681248 25.597707041990958 24.015808898655987 28 23.31946988789744 26.449096762397783 26.247261965792053 23.984171383912727 29 23.65699646161733 26.10406412108654 26.76392588396829 23.47501353332784 30 24.09449937441968 26.395501199178323 26.34840342581406 23.161596000587938 31 24.229339717001086 26.11372118118168 25.76575333134964 23.89118577046759 32 23.202554482847624 26.325750786008513 25.792528706787454 24.679166024356405 33 22.939169931992787 25.72434672565166 26.580217680441383 24.756265661914167 34 23.869899907148824 25.985557877830797 26.886218770277587 23.258323444742796 35 23.91179944862892 25.9639135157614 26.886868549263106 23.237418486346577 36 23.125118752711145 26.33538543993174 26.640893593985826 23.898602213371287 37 23.272013615782548 26.138367970287625 27.018796089495627 23.5708223244342 38 23.348530692870536 25.46687740418225 27.036698620855304 24.14789328209191 39 23.115461692616 25.258208725142595 27.2890369289563 24.337292653285104 40 23.690157596050778 25.181041869069087 27.57915204290513 23.549648491975006 41 22.333351855768782 25.684194865580896 27.997968208330793 23.98448507031953 42 23.100942493215413 25.670840787119857 27.803975571895133 23.4242411477696 43 22.335995784054692 24.55965150336451 27.891449267049307 25.21290344553149 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 436.0 1 558.0 2 680.0 3 1845.5 4 3011.0 5 3011.0 6 4803.5 7 6596.0 8 6306.5 9 6017.0 10 8036.0 11 10055.0 12 10055.0 13 18903.0 14 27751.0 15 46573.0 16 65395.0 17 57119.0 18 48843.0 19 48843.0 20 50982.5 21 53122.0 22 42997.5 23 32873.0 24 38713.5 25 44554.0 26 44554.0 27 51917.5 28 59281.0 29 65532.0 30 71783.0 31 79011.5 32 86240.0 33 86240.0 34 98925.5 35 111611.0 36 131850.5 37 152090.0 38 173910.0 39 195730.0 40 195730.0 41 216218.5 42 236707.0 43 252430.5 44 268154.0 45 296713.5 46 325273.0 47 325273.0 48 369294.5 49 413316.0 50 419919.5 51 426523.0 52 398901.0 53 371279.0 54 371279.0 55 353322.5 56 335366.0 57 320589.5 58 305813.0 59 281670.0 60 257527.0 61 257527.0 62 216702.5 63 175878.0 64 153279.5 65 130681.0 66 110422.5 67 90164.0 68 90164.0 69 74324.0 70 58484.0 71 49228.0 72 39972.0 73 30144.5 74 20317.0 75 20317.0 76 15969.0 77 11621.0 78 10044.5 79 8468.0 80 6697.0 81 4926.0 82 4926.0 83 4021.5 84 3117.0 85 2655.5 86 2194.0 87 1445.5 88 697.0 89 697.0 90 479.0 91 261.0 92 185.0 93 109.0 94 117.0 95 125.0 96 125.0 97 65.5 98 6.0 99 8.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4463056.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.202867966452025 #Duplication Level Percentage of deduplicated Percentage of total 1 80.71713589451613 38.100803082590105 2 9.769847693018562 9.223296614118023 3 3.33607357528807 4.724167215020769 4 1.6700743102959894 3.153291886522601 5 0.9972238620436922 2.3535913146521885 6 0.6388816259231602 1.8094227020785878 7 0.4618920432197986 1.5261840391601234 8 0.34590766367344455 1.3062267021569196 9 0.25208332206975465 1.070915019138291 >10 1.5986356231329977 13.836943323761192 >50 0.11784174752173858 3.834956948451536 >100 0.07514937909004303 7.171741029370164 >500 0.012009459477810283 3.9891545708830285 >1k 0.006862548059006776 5.462504963377963 >5k 1.906263349724095E-4 0.5155466964435705 >10k+ 1.906263349724095E-4 1.9212538922748945 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 33498 0.7505619467916155 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 21515 0.48206878874027126 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 20110 0.4505881172004116 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10284 0.2304250719686242 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 6154 0.13788758196177686 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 5824 0.13049354522999487 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 5499 0.12321153935778535 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 5441 0.12191198138674487 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.2406171914490878E-5 2 0.0 0.0 0.0 0.0 2.2406171914490878E-5 3 0.0 0.0 0.0 0.0 2.2406171914490878E-5 4 0.0 0.0 0.0 0.0 2.2406171914490878E-5 5 0.0 0.0 0.0 0.0 2.2406171914490878E-5 6 0.0 0.0 0.0 0.0 4.4812343828981756E-5 7 0.0 0.0 0.0 0.0 1.1203085957245439E-4 8 0.0 0.0 0.0 0.0 1.3443703148694527E-4 9 0.0 0.0 0.0 0.0 1.7924937531592702E-4 10 0.0 0.0 0.0 0.0 1.7924937531592702E-4 11 0.0 0.0 0.0 0.0 1.7924937531592702E-4 12 0.0 0.0 0.0 0.0 2.2406171914490878E-4 13 0.0 0.0 0.0 0.0 2.2406171914490878E-4 14 0.0 0.0 0.0 6.721851574347263E-5 3.136864068028723E-4 15 0.0 0.0 0.0 1.5684320340143615E-4 3.5849875063185405E-4 16 0.0 0.0 0.0 5.825604697767628E-4 3.809049225463449E-4 17 0.0 0.0 0.0 8.962468765796351E-4 4.033110944608358E-4 18 0.0 0.0 0.0 0.0011427147676390348 4.257172663753267E-4 19 0.0 0.0 0.0 0.001658056721672325 4.257172663753267E-4 20 0.0 0.0 0.0 0.002218211019534597 4.7052961020430844E-4 21 0.0 0.0 0.0 0.003450550474831595 4.929357821187993E-4 22 0.0 0.0 0.0 0.0053102627437343385 4.929357821187993E-4 23 0.0 0.0 0.0 0.00864878235899348 6.049666416912537E-4 24 0.0 0.0 0.0 0.013331672289122073 6.049666416912537E-4 25 0.0 0.0 0.0 0.015258603073768287 6.049666416912537E-4 26 0.0 0.0 0.0 0.01893321526774479 6.049666416912537E-4 27 0.0 0.0 0.0 0.033093915917703026 6.049666416912537E-4 28 0.0 0.0 0.0 0.05989169752743412 6.049666416912537E-4 29 0.0 0.0 0.0 0.09567435407487605 6.049666416912537E-4 30 0.0 0.0 0.0 0.15529717753933628 6.049666416912537E-4 31 0.0 0.0 0.0 0.36739400088190693 6.049666416912537E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGATA 75 2.06895E-4 17.266666 14 AAGACGG 1325 0.0 17.173586 5 CAAGACG 1335 0.0 16.629213 4 TACCGTC 925 0.0 16.0 7 ATACCGT 1015 0.0 15.310345 6 TACGGAT 1690 0.0 15.215976 27 TCTTATA 3245 0.0 15.107858 37 GACGGAC 1460 0.0 15.078767 7 TCTATAC 335 0.0 14.910448 3 ACGGATG 1825 0.0 14.597261 28 ACCGTCG 1015 0.0 14.399014 8 GCGCAAG 1610 0.0 14.363355 1 ACGGACC 1520 0.0 14.361842 8 CTTATAC 1925 0.0 14.31948 37 TATGCCG 170 2.4421752E-8 14.147059 5 TCGTTAC 930 0.0 14.123655 23 CGGACCA 1595 0.0 13.802508 9 CGTCGTA 1070 0.0 13.485981 10 CGCAAGA 1635 0.0 13.464832 2 CGTTACG 790 0.0 13.348101 24 >>END_MODULE