##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727219.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6003751 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.232862422175735 31.0 31.0 34.0 30.0 34.0 2 31.467978768606493 31.0 31.0 34.0 30.0 34.0 3 31.627557671862142 31.0 31.0 34.0 30.0 34.0 4 35.430894452484786 37.0 35.0 37.0 33.0 37.0 5 35.25279096351598 37.0 35.0 37.0 33.0 37.0 6 35.2524884859482 37.0 35.0 37.0 32.0 37.0 7 35.15656828539358 37.0 35.0 37.0 32.0 37.0 8 35.15526243510099 37.0 35.0 37.0 32.0 37.0 9 36.7357085595322 39.0 35.0 39.0 32.0 39.0 10 36.467480746619906 38.0 35.0 39.0 32.0 39.0 11 36.61697761949155 39.0 35.0 39.0 32.0 39.0 12 36.463501900728396 38.0 35.0 39.0 32.0 39.0 13 36.52749206287869 38.0 35.0 39.0 32.0 39.0 14 37.554597950514605 39.0 36.0 41.0 32.0 41.0 15 37.550890268433854 39.0 36.0 41.0 32.0 41.0 16 37.49723364609891 39.0 36.0 41.0 32.0 41.0 17 37.46226584013894 39.0 36.0 41.0 32.0 41.0 18 37.383043367388154 39.0 36.0 41.0 32.0 41.0 19 37.38313780834682 39.0 36.0 41.0 31.0 41.0 20 37.30161294164265 39.0 36.0 41.0 31.0 41.0 21 37.19549311755268 39.0 36.0 40.0 31.0 41.0 22 37.12002962814414 39.0 36.0 40.0 31.0 41.0 23 36.99557676525892 39.0 36.0 40.0 31.0 41.0 24 36.84412994476286 39.0 36.0 40.0 30.0 41.0 25 36.718537794122376 39.0 35.0 40.0 30.0 41.0 26 36.49672096660904 38.0 35.0 40.0 30.0 41.0 27 36.3203887036621 38.0 35.0 40.0 30.0 41.0 28 36.06875718196841 38.0 35.0 40.0 29.0 41.0 29 36.01015248633729 38.0 35.0 40.0 29.0 41.0 30 35.919386563500055 38.0 34.0 40.0 28.0 41.0 31 36.085589991990005 38.0 35.0 40.0 29.0 41.0 32 36.064546647587484 38.0 35.0 40.0 29.0 41.0 33 36.05018978968315 38.0 35.0 40.0 29.0 41.0 34 36.09644970286076 38.0 35.0 40.0 29.0 41.0 35 35.867183532428314 38.0 34.0 40.0 28.0 41.0 36 35.83334035672032 38.0 34.0 40.0 27.0 41.0 37 35.758059752977765 38.0 34.0 40.0 27.0 41.0 38 35.64211090699798 38.0 34.0 40.0 27.0 41.0 39 35.572642169870136 38.0 34.0 40.0 27.0 41.0 40 35.37045856831837 38.0 34.0 40.0 26.0 41.0 41 35.28319329032799 38.0 34.0 40.0 26.0 41.0 42 35.07062234926132 38.0 33.0 40.0 25.0 41.0 43 34.70649249111097 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 8.0 14 18.0 15 57.0 16 166.0 17 331.0 18 570.0 19 1144.0 20 2398.0 21 4753.0 22 8661.0 23 14807.0 24 23597.0 25 36294.0 26 53537.0 27 76160.0 28 104300.0 29 138944.0 30 178728.0 31 222935.0 32 272571.0 33 332181.0 34 406511.0 35 495347.0 36 613938.0 37 789547.0 38 1079726.0 39 1146517.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.98134616175787 18.89340513955359 12.039173510027315 26.086075188661223 2 18.537477653553587 22.3788594830132 33.306078150143136 25.777584713290075 3 20.07246802873737 24.100749681324228 29.82745287071366 25.999329419224747 4 14.36023912384108 15.461234151782776 34.71398130935144 35.46454541502471 5 14.406859978037065 37.706060761014236 33.313590120576286 14.573489140372411 6 34.724191592889184 35.39968596299213 15.591652618504664 14.284469825614021 7 28.934044733034398 31.64216837107335 21.039530120419716 18.384256775472537 8 28.524767266330663 32.653735972727716 19.97263044386751 18.84886631707411 9 28.35327447790556 12.975837938648688 18.621575078646664 40.04931250479908 10 17.057053165595974 26.03752220903232 31.964117099459987 24.941307525911718 11 37.798786125540516 21.39850570085268 20.509111720322846 20.293596453283953 12 22.188911565452997 25.228044933908816 28.5956895947217 23.987353905916482 13 30.39683024828978 18.45071522786338 24.974520095853407 26.17793442799343 14 23.279746278618152 20.460642021962602 24.274824189077794 31.98478751034145 15 26.121936102946307 27.32360152844447 21.61478715556325 24.939675213045977 16 25.460832736067836 25.443943294783544 24.140558127743805 24.954665841404815 17 24.582315289225022 25.608257237850136 24.63476583222722 25.174661640697625 18 24.983864254197087 23.865496753612867 26.39716403961457 24.753474952575484 19 25.24078696801383 25.061282521543614 25.913383149967412 23.78454736047514 20 24.86890279093853 23.729431816875817 25.48803239841226 25.913632993773394 21 26.084959219661176 24.8834936692078 25.474191051560936 23.557356059570093 22 25.81604400315736 24.072617268770806 24.929531554523162 25.18180717354867 23 23.930606049451416 24.134178782564433 25.910484961818035 26.02473020616611 24 24.163327226595506 25.180458016996376 25.689806256122218 24.966408500285905 25 25.04779095602066 23.983689530095436 25.002136164541135 25.96638334934277 26 24.461857262234894 25.445825451455267 25.77438671257352 24.31793057373632 27 26.082893844198402 24.49063926868386 24.689531594498174 24.736935292619563 28 24.175036572969134 25.415527725916682 25.792725247932502 24.616710453181685 29 24.241195212792803 25.332129863480347 26.028011488151325 24.398663435575525 30 24.578217850806936 25.72778251463127 25.846508291233267 23.847491343328528 31 24.972987720510062 25.412729475289698 24.760387297874278 24.853895506325962 32 24.26189893618173 25.29038929162785 24.668011714676375 25.77970005751404 33 23.682527806366387 24.650589273272658 25.722735669750463 25.944147250610495 34 25.182440111190484 24.971505313927906 25.907020461041775 23.93903411383983 35 25.34225686574943 24.671825996781013 26.18289799160558 23.803019145863978 36 23.813928992058464 25.656860186240237 25.81346228382889 24.715748537872408 37 24.53089743395421 25.293887104911576 26.02489676870343 24.150318692430783 38 24.12876550010152 24.4419530390251 26.42403057688435 25.005250883989028 39 24.458809167801927 24.23594849286721 26.104013973930627 25.20122836540023 40 24.83267543907134 24.35529055085729 26.718846267941494 24.093187742129878 41 23.102940145252525 25.05470330131946 27.295185959577605 24.547170593850414 42 24.669377527482403 24.80184471341333 26.968040480026573 23.560737279077696 43 23.53162214755409 23.549777464122013 27.042560559223727 25.876039829100172 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 568.0 1 636.5 2 705.0 3 1811.0 4 2917.0 5 2917.0 6 4713.0 7 6509.0 8 6120.5 9 5732.0 10 7505.0 11 9278.0 12 9278.0 13 16616.5 14 23955.0 15 39278.5 16 54602.0 17 49458.5 18 44315.0 19 44315.0 20 46637.5 21 48960.0 22 41532.0 23 34104.0 24 40566.0 25 47028.0 26 47028.0 27 55128.5 28 63229.0 29 72080.0 30 80931.0 31 91119.5 32 101308.0 33 101308.0 34 121048.5 35 140789.0 36 172641.0 37 204493.0 38 236128.0 39 267763.0 40 267763.0 41 297031.5 42 326300.0 43 343055.5 44 359811.0 45 399890.0 46 439969.0 47 439969.0 48 498167.5 49 556366.0 50 558853.0 51 561340.0 52 530920.0 53 500500.0 54 500500.0 55 485047.0 56 469594.0 57 452467.5 58 435341.0 59 409467.0 60 383593.0 61 383593.0 62 319221.0 63 254849.0 64 227343.0 65 199837.0 66 170229.0 67 140621.0 68 140621.0 69 115989.5 70 91358.0 71 78570.5 72 65783.0 73 48164.5 74 30546.0 75 30546.0 76 23736.0 77 16926.0 78 15029.0 79 13132.0 80 10641.5 81 8151.0 82 8151.0 83 6958.5 84 5766.0 85 5049.0 86 4332.0 87 2836.0 88 1340.0 89 1340.0 90 940.5 91 541.0 92 399.0 93 257.0 94 275.0 95 293.0 96 293.0 97 152.0 98 11.0 99 9.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 6003751.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.932961820835814 #Duplication Level Percentage of deduplicated Percentage of total 1 79.48894318138444 32.53717876422196 2 10.161246608853666 8.31859838984609 3 3.551615658238727 4.361344444229054 4 1.755928004414384 2.8750133585932156 5 1.0727379825232397 2.19551714411921 6 0.7218522351918446 1.7728529990035662 7 0.5096090350318396 1.4601865022157892 8 0.36956397840792976 1.2101878574822384 9 0.2880803680642396 1.0612784436575262 >10 1.828249983331134 13.922010662832143 >50 0.13466417503768122 3.7550197322191106 >100 0.08788147466732184 7.160660093050944 >500 0.014036149488416126 4.003563142933062 >1k 0.014363514549226955 11.21027974551417 >5k 0.0010639640406821858 2.8671597152621877 >10k+ 1.6368677548956708E-4 1.2891490048198477 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27725 0.46179463472086035 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 19619 0.3267790419689291 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17857 0.2974307228930714 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 11761 0.19589420014254422 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8768 0.14604203272254296 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT 8061 0.13426606133398938 No Hit GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGG 7559 0.12590462196050436 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAAC 7508 0.12505515302017023 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC 7434 0.12382259024399914 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGG 7328 0.1220570273484027 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGG 7191 0.11977512058711295 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAA 7055 0.11750987007955527 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCC 7006 0.11669371364668522 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCG 6947 0.11571099467649473 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG 6859 0.11424524434807505 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGA 6756 0.11252965021367475 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGG 6714 0.11183008755692898 No Hit GCGTTATTCCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAA 6677 0.11121380616884345 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 6482 0.10796583669109529 No Hit GAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATG 6449 0.1074161803179379 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATAC 6383 0.10631686757162315 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 6278 0.10456796092975876 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 6225 0.10368517948196052 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.665625373204185E-5 2 0.0 0.0 0.0 0.0 1.665625373204185E-5 3 0.0 0.0 0.0 0.0 1.665625373204185E-5 4 0.0 0.0 0.0 0.0 3.33125074640837E-5 5 0.0 0.0 0.0 0.0 3.33125074640837E-5 6 0.0 0.0 1.665625373204185E-5 1.665625373204185E-5 6.66250149281674E-5 7 0.0 0.0 1.665625373204185E-5 1.665625373204185E-5 6.66250149281674E-5 8 0.0 0.0 1.665625373204185E-5 1.665625373204185E-5 6.66250149281674E-5 9 0.0 0.0 1.665625373204185E-5 3.33125074640837E-5 9.993752239225111E-5 10 0.0 0.0 1.665625373204185E-5 3.33125074640837E-5 9.993752239225111E-5 11 0.0 0.0 1.665625373204185E-5 3.33125074640837E-5 9.993752239225111E-5 12 0.0 0.0 1.665625373204185E-5 6.66250149281674E-5 9.993752239225111E-5 13 0.0 0.0 1.665625373204185E-5 9.993752239225111E-5 9.993752239225111E-5 14 0.0 0.0 1.665625373204185E-5 1.6656253732041853E-4 1.332500298563348E-4 15 0.0 0.0 1.665625373204185E-5 2.831563134447115E-4 1.8321879105246037E-4 16 0.0 0.0 1.665625373204185E-5 6.662501492816741E-4 2.831563134447115E-4 17 0.0 0.0 1.665625373204185E-5 0.0010660002388506785 2.831563134447115E-4 18 0.0 0.0 1.665625373204185E-5 0.0011992502687070132 3.3312507464083706E-4 19 0.0 0.0 1.665625373204185E-5 0.001565687850811934 3.3312507464083706E-4 20 0.0 0.0 1.665625373204185E-5 0.0019654379403809385 3.497813283728789E-4 21 0.0 0.0 1.665625373204185E-5 0.0027649381195189475 3.6643758210492075E-4 22 0.0 0.0 1.665625373204185E-5 0.0039641883882259605 3.6643758210492075E-4 23 0.0 0.0 1.665625373204185E-5 0.005679782522626272 4.830313582292137E-4 24 0.0 0.0 1.665625373204185E-5 0.008411408134681135 4.996876119612555E-4 25 0.0 0.0 1.665625373204185E-5 0.009610658403388149 5.163438656932974E-4 26 0.0 0.0 1.665625373204185E-5 0.012092440209462384 5.163438656932974E-4 27 0.0 0.0 1.665625373204185E-5 0.0248344743144744 5.330001194253392E-4 28 0.0 0.0 1.665625373204185E-5 0.04718716682287457 5.330001194253392E-4 29 0.0 0.0 1.665625373204185E-5 0.07861751761523754 5.330001194253392E-4 30 0.0 0.0 1.665625373204185E-5 0.13070162303533242 5.330001194253392E-4 31 0.0 0.0 1.665625373204185E-5 0.31217150744592836 5.330001194253392E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 2515 0.0 20.22863 5 CAAGACG 2540 0.0 20.175198 4 CTTATAC 2360 0.0 17.637712 37 ACGGACC 2940 0.0 17.052721 8 GTATACG 120 1.04333594E-7 16.958332 1 GACGGAC 2995 0.0 16.801334 7 AGACGGA 3185 0.0 16.20565 6 CGGACCA 3145 0.0 16.058823 9 CGCAAGA 3185 0.0 15.973311 2 GCGCAAG 3145 0.0 15.941176 1 TCTATAC 440 0.0 15.556818 3 ATACCGT 1910 0.0 15.303664 6 AGAGCGA 3245 0.0 15.278891 15 GCAAGAC 3660 0.0 15.113387 3 TACCGTC 1905 0.0 15.052493 7 ACCGTCG 1930 0.0 14.953368 8 TCGTTTA 1910 0.0 14.91623 30 GAGCGAA 3350 0.0 14.855224 16 CAGAGCG 3400 0.0 14.8 14 TCTTATA 3795 0.0 14.673254 37 >>END_MODULE