##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727218.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1115047 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.411671436271295 31.0 30.0 31.0 27.0 34.0 2 30.661248359934604 31.0 30.0 33.0 27.0 34.0 3 30.742301445589288 31.0 30.0 34.0 27.0 34.0 4 34.58999486120316 35.0 35.0 37.0 32.0 37.0 5 34.28123836932434 35.0 35.0 37.0 30.0 37.0 6 34.41341037642359 35.0 35.0 37.0 30.0 37.0 7 34.399697053128705 35.0 35.0 37.0 30.0 37.0 8 34.40346640096785 35.0 35.0 37.0 30.0 37.0 9 35.90888276458302 37.0 35.0 39.0 30.0 39.0 10 35.5552635897859 37.0 35.0 39.0 30.0 39.0 11 35.77149124655732 37.0 35.0 39.0 30.0 39.0 12 35.55256504882754 37.0 35.0 39.0 30.0 39.0 13 35.6795040926526 37.0 35.0 39.0 30.0 39.0 14 36.54116821981495 38.0 35.0 40.0 30.0 41.0 15 36.558241042754254 38.0 35.0 40.0 30.0 41.0 16 36.47505889886256 38.0 35.0 40.0 30.0 41.0 17 36.39771148660101 38.0 35.0 40.0 30.0 41.0 18 36.28786768629484 38.0 35.0 40.0 30.0 41.0 19 36.26620850959646 38.0 34.0 40.0 30.0 41.0 20 36.13110120021847 38.0 34.0 40.0 29.0 41.0 21 35.99629881072278 38.0 34.0 40.0 29.0 41.0 22 35.89771641912852 38.0 34.0 40.0 28.0 41.0 23 35.75848103263809 38.0 34.0 40.0 27.0 41.0 24 35.578919991713356 38.0 34.0 40.0 27.0 41.0 25 35.44285128788293 38.0 34.0 40.0 27.0 41.0 26 35.130143393058766 38.0 33.0 40.0 27.0 41.0 27 34.93922318969514 38.0 33.0 40.0 26.0 41.0 28 34.68972070235604 37.0 33.0 40.0 25.0 41.0 29 34.642661699461996 37.0 33.0 40.0 25.0 41.0 30 34.57072482146493 37.0 33.0 40.0 25.0 41.0 31 34.75735821001267 37.0 33.0 40.0 25.0 41.0 32 34.7541359243153 37.0 33.0 40.0 25.0 41.0 33 34.769302997990216 38.0 33.0 40.0 25.0 41.0 34 34.85774142255887 38.0 33.0 40.0 25.0 41.0 35 34.604555682406215 37.0 33.0 40.0 25.0 41.0 36 34.56334037937415 37.0 33.0 40.0 24.0 41.0 37 34.482976950747364 37.0 33.0 40.0 24.0 41.0 38 34.39446498667769 37.0 33.0 40.0 24.0 41.0 39 34.32252272774152 37.0 32.0 40.0 24.0 41.0 40 34.1103451244656 37.0 32.0 40.0 24.0 41.0 41 34.043937161393195 37.0 32.0 40.0 23.0 41.0 42 33.81790274311307 37.0 31.0 40.0 23.0 41.0 43 33.49405630435309 36.0 31.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 3.0 13 6.0 14 6.0 15 24.0 16 45.0 17 96.0 18 224.0 19 525.0 20 1004.0 21 1955.0 22 3301.0 23 5346.0 24 8529.0 25 12198.0 26 16902.0 27 22873.0 28 29637.0 29 37238.0 30 45668.0 31 54736.0 32 64439.0 33 76017.0 34 89809.0 35 106148.0 36 128826.0 37 157923.0 38 180455.0 39 71111.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.68195690405875 23.649137659668156 14.25374894511173 23.41515649116136 2 24.368120805670074 23.43614215364913 29.266927761789415 22.928809278891382 3 25.012488262826587 23.5558680486114 28.209931958025088 23.22171173053692 4 20.669352951041525 18.031885651456843 31.048556697610056 30.250204699891576 5 15.657994685425816 37.79185989469502 32.59916398142859 13.950981438450578 6 35.80432035600293 35.967721539988894 14.203168117577105 14.024789986431067 7 29.479295491580178 31.257606181622837 20.35429896677001 18.908799360026975 8 27.790936166816287 33.92798689203235 19.011844343781025 19.269232597370333 9 27.732014883677547 13.004474250861175 18.27501441643267 40.9884964490286 10 16.812833898481408 26.72873878858918 32.9013933941798 23.55703391874961 11 38.51147081692521 20.970057764381234 20.00068158561926 20.5177898330743 12 21.610568881849822 24.889713169041304 28.52991846980441 24.96979947930446 13 31.320294122131177 19.181702654686305 23.59676318576706 25.901240037415462 14 23.259737033506212 20.231972284576344 23.567526749993498 32.94076393192395 15 26.562916182008472 27.710849856553132 20.495997029721615 25.23023693171678 16 26.145355307892853 25.830121958984687 23.061270063055638 24.963252670066822 17 24.97805025259025 25.644748607009394 23.82706737922258 25.55013376117778 18 24.98343119168968 24.75276826896086 25.10351581592525 25.160284723424216 19 25.692997694267593 25.197861614801887 24.86881718887186 24.240323502058658 20 25.322789084226944 24.10777303557608 24.625957470851002 25.943480409345977 21 26.224634477291094 24.812407010646186 24.56578063525573 24.397177876806985 22 26.420500660510278 24.508563316165148 23.91881239086783 25.152123632456746 23 25.40843569822617 24.510626009486597 24.633311420953557 25.44762687133367 24 25.261894790085083 24.828729192581118 24.493227639731778 25.41614837760202 25 25.94276295079938 24.19862122403809 24.215929911474586 25.642685913687945 26 25.449958611610096 25.094457901774543 24.322024094051642 25.13355939256372 27 26.592780394010298 24.715639789174805 23.703574826890705 24.988004989924193 28 25.460810172127275 25.345389028444544 24.17243398708754 25.021366812340645 29 25.49659341713847 25.29301455454344 24.605868631546475 24.604523396771615 30 26.092980833991753 25.019393801337518 24.040600979151552 24.847024385519177 31 25.98751442764296 25.17741404622406 24.23915763192045 24.595913894212533 32 25.74707613221685 24.69868983101161 23.957017058473767 25.597216978297777 33 25.081812694890885 24.705685051840863 24.34767323709225 25.864829016176 34 25.999173129025056 24.891865544681078 24.697972372465017 24.410988953828852 35 26.014508805458426 24.654745495032945 24.73357625283957 24.597169446669064 36 25.080377777797707 25.171495013214688 24.625688423896033 25.12243878509157 37 25.43381579431181 25.106834061703225 24.90872582052595 24.55062432345901 38 25.519641772947686 24.12122538332465 25.030693773446323 25.328439070281345 39 25.28691615689742 24.614478134105557 25.098672970735763 24.999932738261258 40 25.590849533696787 24.117727772910023 25.58860747573869 24.702815217654503 41 24.478788786481644 24.44192935365056 25.837117179813944 25.242164680053847 42 24.997959727258134 24.48524591340096 25.550940902042697 24.965853457298213 43 24.59304406002617 23.721690655192113 25.86366314603779 25.821602138743927 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 71.0 1 71.0 2 71.0 3 75.5 4 80.0 5 80.0 6 170.5 7 261.0 8 269.5 9 278.0 10 397.0 11 516.0 12 516.0 13 998.0 14 1480.0 15 2182.0 16 2884.0 17 2534.0 18 2184.0 19 2184.0 20 2832.0 21 3480.0 22 3652.0 23 3824.0 24 4746.0 25 5668.0 26 5668.0 27 7266.5 28 8865.0 29 10785.0 30 12705.0 31 15559.5 32 18414.0 33 18414.0 34 22370.0 35 26326.0 36 32040.0 37 37754.0 38 43663.5 39 49573.0 40 49573.0 41 55860.5 42 62148.0 43 68311.0 44 74474.0 45 81912.5 46 89351.0 47 89351.0 48 95969.0 49 102587.0 50 104272.5 51 105958.0 52 106036.0 53 106114.0 54 106114.0 55 100816.5 56 95519.0 57 90622.0 58 85725.0 59 78465.5 60 71206.0 61 71206.0 62 60327.0 63 49448.0 64 42971.0 65 36494.0 66 30239.0 67 23984.0 68 23984.0 69 19700.5 70 15417.0 71 12708.5 72 10000.0 73 7561.0 74 5122.0 75 5122.0 76 4017.0 77 2912.0 78 2418.0 79 1924.0 80 1485.0 81 1046.0 82 1046.0 83 784.0 84 522.0 85 468.5 86 415.0 87 287.5 88 160.0 89 160.0 90 103.5 91 47.0 92 33.5 93 20.0 94 16.5 95 13.0 96 13.0 97 7.5 98 2.0 99 3.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1115047.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.12659158226309 #Duplication Level Percentage of deduplicated Percentage of total 1 84.91543972515885 54.45337722283541 2 8.146008816077563 10.447515607482408 3 2.725953479593696 5.2441831637446175 4 1.3179112991429998 3.380526384871716 5 0.7726702477295679 2.477435470196003 6 0.4650269244914729 1.789235499697235 7 0.32299728306131076 1.449890039713731 8 0.22864361111709794 1.1729708374399945 9 0.1769021613940757 1.0209719388363734 >10 0.8233147845575266 9.210258816748901 >50 0.056879299547910434 2.509639497371256 >100 0.04572017549222277 5.534393699995681 >500 0.0018288057924739957 0.7641824775266949 >1k 7.033868432592291E-4 0.5454193435398887 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 1647 0.14770677827930123 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1252 0.11228226254139961 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.793646366476032E-4 2 0.0 0.0 0.0 0.0 1.793646366476032E-4 3 0.0 0.0 0.0 0.0 1.793646366476032E-4 4 0.0 0.0 0.0 0.0 1.793646366476032E-4 5 0.0 0.0 0.0 0.0 1.793646366476032E-4 6 0.0 0.0 0.0 0.0 2.690469549714048E-4 7 0.0 0.0 0.0 0.0 4.48411591619008E-4 8 0.0 0.0 0.0 0.0 4.48411591619008E-4 9 0.0 0.0 0.0 0.0 7.174585465904128E-4 10 0.0 0.0 0.0 0.0 7.174585465904128E-4 11 0.0 0.0 0.0 0.0 7.174585465904128E-4 12 0.0 0.0 0.0 0.0 7.174585465904128E-4 13 0.0 0.0 0.0 8.96823183238016E-5 7.174585465904128E-4 14 0.0 0.0 0.0 8.96823183238016E-5 8.071408649142144E-4 15 0.0 0.0 0.0 8.96823183238016E-5 8.071408649142144E-4 16 0.0 0.0 0.0 8.96823183238016E-5 8.96823183238016E-4 17 0.0 0.0 0.0 1.793646366476032E-4 8.96823183238016E-4 18 0.0 0.0 0.0 1.793646366476032E-4 8.96823183238016E-4 19 0.0 0.0 0.0 2.690469549714048E-4 8.96823183238016E-4 20 0.0 0.0 0.0 4.48411591619008E-4 8.96823183238016E-4 21 0.0 0.0 0.0 7.174585465904128E-4 8.96823183238016E-4 22 0.0 0.0 0.0 9.865055015618176E-4 8.96823183238016E-4 23 0.0 0.0 0.0 0.0012555524565332223 8.96823183238016E-4 24 0.0 0.0 0.0 0.0015245994115046272 8.96823183238016E-4 25 0.0 0.0 0.0 0.001793646366476032 8.96823183238016E-4 26 0.0 0.0 0.0 0.0027801518680378497 8.96823183238016E-4 27 0.0 0.0 0.0 0.007443632420875533 8.96823183238016E-4 28 0.0 0.0 0.0 0.01730868743649371 8.96823183238016E-4 29 0.0 0.0 0.0 0.030491988230092543 8.96823183238016E-4 30 0.0 0.0 0.0 0.053450661720985754 8.96823183238016E-4 31 0.0 0.0 0.0 0.1337163366207882 9.865055015618176E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACATCG 40 0.0019311514 23.125 5 TATCCCG 40 0.0019311514 23.125 5 TAACGAA 175 0.0 19.02857 13 GGGTAAG 860 0.0 18.5 1 ATAACGA 180 0.0 18.5 12 GGTATCA 815 0.0 18.15951 1 AACGAAC 195 0.0 18.025642 14 AAGACGG 340 0.0 17.411764 5 ATTATAC 85 2.722998E-5 17.411764 3 GTAAGAG 900 0.0 17.266666 3 CGAACGA 195 0.0 17.076923 16 ACGAACG 195 0.0 17.076923 15 CAAGACG 360 0.0 16.958334 4 GGTAAGA 940 0.0 16.531916 2 TAGTACA 90 4.4457658E-5 16.444445 4 CGATAAC 205 0.0 16.243904 10 TAGGGTG 80 3.3824524E-4 16.1875 5 TTAACAC 80 3.3824524E-4 16.1875 3 CCGATAA 210 0.0 15.857144 9 CGAGACT 225 0.0 15.622222 20 >>END_MODULE