##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727217.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3559884 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.932798372081788 31.0 31.0 33.0 28.0 34.0 2 31.179761756281945 31.0 31.0 34.0 28.0 34.0 3 31.320732641850128 31.0 31.0 34.0 28.0 34.0 4 35.16085805043085 35.0 35.0 37.0 33.0 37.0 5 34.942108225998375 35.0 35.0 37.0 32.0 37.0 6 34.952731324953284 36.0 35.0 37.0 32.0 37.0 7 34.87223881452317 35.0 35.0 37.0 32.0 37.0 8 34.86438715418817 36.0 35.0 37.0 32.0 37.0 9 36.409734699220536 38.0 35.0 39.0 32.0 39.0 10 36.1263709716384 38.0 35.0 39.0 31.0 39.0 11 36.281911152161136 38.0 35.0 39.0 32.0 39.0 12 36.115248699114915 38.0 35.0 39.0 31.0 39.0 13 36.19363945566766 38.0 35.0 39.0 32.0 39.0 14 37.167432421955326 39.0 36.0 40.0 31.0 41.0 15 37.16896955069323 39.0 36.0 40.0 31.0 41.0 16 37.10908220604941 39.0 36.0 40.0 31.0 41.0 17 37.049293460123984 39.0 36.0 40.0 31.0 41.0 18 36.96573483855092 39.0 36.0 40.0 31.0 41.0 19 36.96238079667764 39.0 36.0 40.0 31.0 41.0 20 36.85295279284381 39.0 36.0 40.0 31.0 41.0 21 36.72912656704544 39.0 35.0 40.0 30.0 41.0 22 36.64318556447345 38.0 35.0 40.0 30.0 41.0 23 36.52062117754399 38.0 35.0 40.0 30.0 41.0 24 36.365865573147886 38.0 35.0 40.0 30.0 41.0 25 36.22642647906505 38.0 34.0 40.0 29.0 41.0 26 35.97957770534096 38.0 34.0 40.0 28.0 41.0 27 35.80023843473551 38.0 34.0 40.0 27.0 41.0 28 35.55430514027985 38.0 34.0 40.0 27.0 41.0 29 35.50750389619437 38.0 34.0 40.0 27.0 41.0 30 35.43150900422598 38.0 34.0 40.0 27.0 41.0 31 35.611635379130334 38.0 34.0 40.0 27.0 41.0 32 35.61175251777867 38.0 34.0 40.0 27.0 41.0 33 35.606947024116515 38.0 34.0 40.0 27.0 41.0 34 35.68750863792191 38.0 34.0 40.0 27.0 41.0 35 35.46235579586301 38.0 34.0 40.0 26.0 41.0 36 35.42040527163245 38.0 34.0 40.0 26.0 41.0 37 35.34243924802044 38.0 34.0 40.0 26.0 41.0 38 35.25682466057883 38.0 33.0 40.0 26.0 41.0 39 35.18620662920477 38.0 33.0 40.0 26.0 41.0 40 34.992880947806164 38.0 33.0 40.0 25.0 41.0 41 34.93501164644691 38.0 33.0 40.0 25.0 41.0 42 34.719620639324205 38.0 33.0 40.0 24.0 41.0 43 34.38577717700914 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 7.0 13 4.0 14 13.0 15 51.0 16 118.0 17 259.0 18 485.0 19 890.0 20 1915.0 21 3797.0 22 6896.0 23 11448.0 24 18521.0 25 27816.0 26 40254.0 27 55538.0 28 74271.0 29 96519.0 30 121221.0 31 148514.0 32 179196.0 33 212719.0 34 254893.0 35 306827.0 36 372493.0 37 465658.0 38 639716.0 39 519845.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.61334582812249 20.79871141868668 13.008092398516355 25.579850354674477 2 19.96556629373317 22.939427239763994 32.11068113455382 24.98432533194902 3 20.888910986987216 23.95280295650083 30.022860295447828 25.135425761064123 4 15.906248630573355 16.366235529022855 34.232323300422145 33.49519253998164 5 14.922143530519532 37.26396702813911 33.33847395027478 14.475415491066562 6 35.01956805334107 35.77692419191187 15.05459166647003 14.148916088277034 7 28.98352867677711 31.56164639072509 20.89829331517544 18.55653161732236 8 27.905403659220358 33.20605390512725 19.705810638773624 19.182731796878773 9 27.803434044480102 13.153827484266342 18.832804664421648 40.20993380683191 10 16.86428546548146 26.300014270127903 32.6081411641503 24.227559100240345 11 37.759067430287054 21.299851343470742 20.62690806779097 20.31417315845123 12 21.785148055386074 25.083429684787482 28.65834954172664 24.473072718099804 13 30.48717317755298 18.89339652640367 24.490320471116476 26.12910982492688 14 23.12437708644439 20.473981736483548 24.00016405028928 32.40147712678279 15 25.887079466634304 27.82860340393114 21.17372363818596 25.11059349124859 16 25.573277106782133 25.908428476882957 23.54436268148063 24.973931734854283 17 24.505461413911238 25.729209154006146 24.41006504706333 25.35526438501929 18 24.647235696444042 24.656842751055933 25.84528035183169 24.850641200668335 19 25.259278111309246 25.098542536779288 25.595525022725457 24.04665432918601 20 24.974325006095704 24.133286365510788 25.090227659103498 25.80216096929001 21 25.97564976836324 25.055366972631692 25.077165435727682 23.891817823277385 22 25.975059861501105 24.47717397533178 24.615184090268112 24.932582072899002 23 24.520152903858666 24.41211567567932 25.34998331406304 25.717748106398975 24 24.655915754558293 25.056293969129328 25.26138492153115 25.02640535478122 25 25.353326119615133 24.220452127091782 24.713389537411892 25.712832215881193 26 24.694063064976273 25.50979189209536 25.21073720379653 24.585407839131836 27 26.07048431915197 24.764233890767226 24.410008865457414 24.755272924623387 28 24.525040703573488 25.54881001740506 25.10994740278054 24.81620187624091 29 24.59453735009343 25.566928585313452 25.36995587496671 24.468578189626403 30 25.02157373667232 25.612941320559884 24.98230279413599 24.38318214863181 31 25.147083444292008 25.535354522787824 24.62240342662851 24.695158606291663 32 24.750076126076017 25.1827025824437 24.3717491918276 25.695472099652683 33 24.116207157311866 24.806229641190555 25.19812443326805 25.87943876822953 34 25.392568971348506 25.0669403834507 25.479341461688076 24.06114918351272 35 25.551422462080225 24.794094414312376 25.47363902868745 24.180844094919944 36 24.075953036671983 25.71845037647294 25.39652977456569 24.80906681228939 37 24.66810716304239 25.41973277780961 25.57378274123539 24.338377317912606 38 24.440571659076532 24.521107991159262 25.96463817360341 25.073682176160794 39 24.59341371797508 24.63178575481673 25.772412808956695 25.002387718251494 40 24.936851874948733 24.462033032537015 26.303132349256327 24.297982743257926 41 23.68130534590453 24.820555950699514 26.7901706909551 24.707968012440855 42 24.603582588646148 24.67639394991522 26.57316923809877 24.14685422333986 43 23.79285392445372 23.80518578695261 26.671234231227757 25.730726057365917 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 547.0 1 493.5 2 440.0 3 628.0 4 816.0 5 816.0 6 1435.0 7 2054.0 8 2036.0 9 2018.0 10 2756.0 11 3494.0 12 3494.0 13 6443.5 14 9393.0 15 15279.5 16 21166.0 17 18802.0 18 16438.0 19 16438.0 20 18646.0 21 20854.0 22 19459.0 23 18064.0 24 22280.0 25 26496.0 26 26496.0 27 32117.5 28 37739.0 29 43674.0 30 49609.0 31 57651.5 32 65694.0 33 65694.0 34 79083.0 35 92472.0 36 112059.0 37 131646.0 38 150168.5 39 168691.0 40 168691.0 41 186289.5 42 203888.0 43 215647.5 44 227407.0 45 248056.5 46 268706.0 47 268706.0 48 291144.5 49 313583.0 50 318362.5 51 323142.0 52 317065.0 53 310988.0 54 310988.0 55 297516.0 56 284044.0 57 273544.0 58 263044.0 59 243473.5 60 223903.0 61 223903.0 62 187057.5 63 150212.0 64 131848.0 65 113484.0 66 95553.0 67 77622.0 68 77622.0 69 64495.0 70 51368.0 71 43686.5 72 36005.0 73 26527.0 74 17049.0 75 17049.0 76 13485.0 77 9921.0 78 8716.5 79 7512.0 80 5865.0 81 4218.0 82 4218.0 83 3488.5 84 2759.0 85 2451.5 86 2144.0 87 1430.5 88 717.0 89 717.0 90 494.0 91 271.0 92 202.0 93 133.0 94 125.5 95 118.0 96 118.0 97 63.0 98 8.0 99 7.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3559884.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.271454265772476 #Duplication Level Percentage of deduplicated Percentage of total 1 81.37259596857136 40.907187367212174 2 9.572065288299306 9.624032847394536 3 3.2934736188831173 4.967031252216324 4 1.603156717939432 3.223720785070322 5 0.9170637217008705 2.30510634721422 6 0.6008290466322533 1.8122729963592603 7 0.45827664927661554 1.612676353062658 8 0.32073640086948824 1.2899108246143156 9 0.25680630553605555 1.1619023799526027 >10 1.4394982645746628 12.89523009600293 >50 0.0825520324562455 2.866220812181328 >100 0.06401261092102721 6.769551750447723 >500 0.012155450392444483 4.314282148819622 >1k 0.006553860345621108 5.458338781446178 >5k 1.6804770116977198E-4 0.5097243002118178 >10k+ 5.6015900389923994E-5 0.2828109577938946 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10043 0.28211593411470715 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 6405 0.17992159295078153 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6287 0.17660687820164928 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5409 0.15194315320386845 No Hit GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGG 3875 0.10885186146514887 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGG 3764 0.10573378233672782 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.8090802958748093E-5 2 0.0 0.0 0.0 0.0 2.8090802958748093E-5 3 0.0 0.0 0.0 0.0 2.8090802958748093E-5 4 0.0 0.0 0.0 0.0 2.8090802958748093E-5 5 0.0 0.0 0.0 0.0 2.8090802958748093E-5 6 0.0 0.0 0.0 0.0 8.427240887624429E-5 7 0.0 0.0 0.0 0.0 8.427240887624429E-5 8 0.0 0.0 0.0 0.0 1.4045401479374046E-4 9 0.0 0.0 0.0 0.0 1.9663562071123666E-4 10 0.0 0.0 0.0 0.0 1.9663562071123666E-4 11 0.0 0.0 0.0 0.0 1.9663562071123666E-4 12 0.0 0.0 0.0 0.0 1.9663562071123666E-4 13 0.0 0.0 0.0 0.0 1.9663562071123666E-4 14 0.0 0.0 0.0 0.0 3.0899883254622906E-4 15 0.0 0.0 0.0 5.6181605917496186E-5 3.3708963550497714E-4 16 0.0 0.0 0.0 3.0899883254622906E-4 4.213620443812214E-4 17 0.0 0.0 0.0 4.213620443812214E-4 4.213620443812214E-4 18 0.0 0.0 0.0 4.213620443812214E-4 4.494528473399695E-4 19 0.0 0.0 0.0 5.337252562162138E-4 4.494528473399695E-4 20 0.0 0.0 0.0 6.179976650924581E-4 4.494528473399695E-4 21 0.0 0.0 0.0 8.70814891721191E-4 4.775436502987176E-4 22 0.0 0.0 0.0 0.0013764493449786566 5.337252562162138E-4 23 0.0 0.0 0.0 0.002134901024864855 7.303608769274505E-4 24 0.0 0.0 0.0 0.002865261901792306 7.303608769274505E-4 25 0.0 0.0 0.0 0.003314714749132275 7.303608769274505E-4 26 0.0 0.0 0.0 0.004859708911863421 7.865424828449466E-4 27 0.0 0.0 0.0 0.014045401479374046 8.146332858036948E-4 28 0.0 0.0 0.0 0.029270616683015515 8.146332858036948E-4 29 0.0 0.0 0.0 0.04969263043402538 8.146332858036948E-4 30 0.0 0.0 0.0 0.08289595953126562 8.146332858036948E-4 31 0.0 0.0 0.0 0.19992224465741018 8.427240887624428E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAAGACG 1490 0.0 18.251677 4 AAGACGG 1440 0.0 18.243055 5 CTTATAC 1030 0.0 15.805826 37 ACGGACC 1555 0.0 15.704181 8 GACGGAC 1615 0.0 15.235294 7 TAGTACT 245 0.0 15.102041 4 CGGACCA 1610 0.0 15.052795 9 CGAACGA 840 0.0 14.9761915 16 CGCAAGA 1695 0.0 14.734514 2 ACGAACG 840 0.0 14.535715 15 TCTTATA 1605 0.0 14.523363 37 AGACGGA 1765 0.0 14.150143 6 AGAGCGA 1780 0.0 14.0309 15 GCGCAAG 1730 0.0 14.00867 1 TAATACC 270 0.0 13.703704 4 GTAAACG 855 0.0 13.6315775 27 CAGAGCG 1865 0.0 13.490618 14 GCAAGAC 2085 0.0 13.486811 3 AACGAAC 910 0.0 13.417583 14 ATACCGT 1230 0.0 13.386179 6 >>END_MODULE