##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727216.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1792231 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.51234857560214 31.0 30.0 31.0 27.0 34.0 2 30.7635645181899 31.0 31.0 33.0 27.0 34.0 3 30.856177021823637 31.0 30.0 34.0 27.0 34.0 4 34.707760327770245 35.0 35.0 37.0 32.0 37.0 5 34.42735060380051 35.0 35.0 37.0 30.0 37.0 6 34.53589074176264 35.0 35.0 37.0 30.0 37.0 7 34.49783035780544 35.0 35.0 37.0 30.0 37.0 8 34.50743124072734 35.0 35.0 37.0 30.0 37.0 9 36.01936859701679 37.0 35.0 39.0 31.0 39.0 10 35.684392246312 37.0 35.0 39.0 30.0 39.0 11 35.878647339544955 37.0 35.0 39.0 30.0 39.0 12 35.67716884709616 37.0 35.0 39.0 30.0 39.0 13 35.79313436716584 37.0 35.0 39.0 30.0 39.0 14 36.665529164488284 38.0 36.0 40.0 31.0 41.0 15 36.68060701996562 38.0 36.0 40.0 31.0 41.0 16 36.60705065362668 38.0 35.0 40.0 30.0 41.0 17 36.53110173855937 38.0 35.0 40.0 30.0 41.0 18 36.42779027926645 38.0 35.0 40.0 30.0 41.0 19 36.409812685976306 38.0 35.0 40.0 30.0 41.0 20 36.27975300058977 38.0 34.0 40.0 30.0 41.0 21 36.14812766881055 38.0 34.0 40.0 29.0 41.0 22 36.046472246044175 38.0 34.0 40.0 29.0 41.0 23 35.90113160636101 38.0 34.0 40.0 28.0 41.0 24 35.729440568765966 38.0 34.0 40.0 27.0 41.0 25 35.5862001047856 38.0 34.0 40.0 27.0 41.0 26 35.29557796958093 38.0 34.0 40.0 27.0 41.0 27 35.10011321085284 38.0 33.0 40.0 26.0 41.0 28 34.8531796403477 38.0 33.0 40.0 25.0 41.0 29 34.8007829347891 38.0 33.0 40.0 25.0 41.0 30 34.72250563682918 37.0 33.0 40.0 25.0 41.0 31 34.90928680510492 38.0 33.0 40.0 25.0 41.0 32 34.90533865333207 38.0 33.0 40.0 25.0 41.0 33 34.91312001633718 38.0 33.0 40.0 25.0 41.0 34 34.995593759956165 38.0 33.0 40.0 25.0 41.0 35 34.75246606045761 38.0 33.0 40.0 25.0 41.0 36 34.703963942148086 38.0 33.0 40.0 25.0 41.0 37 34.61320332033092 38.0 33.0 40.0 24.0 41.0 38 34.539672620326286 37.0 33.0 40.0 24.0 41.0 39 34.4574951554794 37.0 33.0 40.0 24.0 41.0 40 34.237854941689996 37.0 32.0 40.0 24.0 41.0 41 34.179885293804205 37.0 32.0 40.0 24.0 41.0 42 33.95458732719164 37.0 32.0 40.0 23.0 41.0 43 33.59822422444428 37.0 31.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 6.0 13 11.0 14 11.0 15 44.0 16 84.0 17 165.0 18 355.0 19 758.0 20 1443.0 21 2835.0 22 4855.0 23 8092.0 24 12525.0 25 18521.0 26 25938.0 27 34778.0 28 45300.0 29 57824.0 30 70979.0 31 85795.0 32 100937.0 33 119793.0 34 141929.0 35 167697.0 36 203185.0 37 253150.0 38 302317.0 39 132901.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.6245411445288 23.60772690573927 14.103483312140009 23.664248637591918 2 23.26089661433152 23.76417995224946 29.881918123277636 23.093005310141383 3 24.04991320873258 24.011413707273224 28.614335986823125 23.324337097171068 4 19.465961698017722 17.97932297789738 31.960612220188132 30.594103103896764 5 15.337643417617484 37.82397469968994 32.92655913216544 13.911822750527136 6 35.3376322583417 36.418687100044586 14.327952144561722 13.915728497052 7 29.00011215072164 31.51033544225047 20.798156041269234 18.691396365758656 8 27.60001361431646 33.99411125016808 19.321170094703195 19.08470504081226 9 27.52435372449199 13.195285652351735 18.663777158189987 40.61658346496629 10 16.764691605044217 26.773334464139946 33.08892659484185 23.37304733597399 11 38.06629837336816 21.3531068260732 20.334320743252405 20.24627405730623 12 21.384073816377462 25.172759538251487 28.83618238943529 24.606984255935757 13 30.77064284682053 19.33696046993942 24.0872967826134 25.80509990062665 14 22.949999190952504 20.558064222748072 23.911147614342124 32.5807889719573 15 26.08659263231135 28.084884147188617 20.832415017930167 24.996108202569868 16 25.662763337984888 26.242710900547976 23.335663762093166 24.758861999373966 17 24.575626690979007 26.177708119098487 24.156037921450974 25.090627268471533 18 24.730126864226765 25.05977187092512 25.482652626809827 24.72744863803829 19 25.39773053808354 25.455423993893646 25.287644282461358 23.85920118556146 20 24.967652049317305 24.530877995079877 24.892103752250687 25.609366203352135 21 25.737697874883313 25.369274384830977 24.842277585869233 24.050750154416477 22 25.94743646326841 25.018761532414068 24.320469850147667 24.71333215416986 23 24.96787523483301 24.781850107491724 25.05603351353704 25.19424114413823 24 24.957943479384078 25.283068979389377 24.88072129094966 24.87826625027689 25 25.561492910233113 24.556823311280745 24.545775628253278 25.335908150232868 26 24.967763642075155 25.597481574640767 24.736097076771912 24.69865770651216 27 26.05194308099793 25.12187324067043 24.15804659109233 24.668137087239312 28 25.058265368694105 25.712645300745272 24.70987277867641 24.519216551884217 29 25.04186123328968 25.619800126211413 25.041693844152903 24.296644796346005 30 25.382721312152285 25.635646297826565 24.51157244797127 24.470059942049883 31 25.492193807606274 25.525336856688675 24.55129946976701 24.431169865938042 32 25.17370807669324 25.199151225483767 24.308919999709858 25.318220698113137 33 24.55938994471137 25.199486003757325 24.750771524429606 25.490352527101695 34 25.541573602956312 25.228611713557015 25.12750867494201 24.10230600854466 35 25.5436380689766 25.03488668592386 25.25528238268393 24.166192862415613 36 24.58890622916354 25.741882603302813 24.976133098914147 24.693078068619503 37 24.992927808971054 25.484493907314405 25.278270490801685 24.244307792912856 38 24.8585701285158 24.68309051679164 25.497382870846447 24.96095648384611 39 24.844900015678782 24.894781978439163 25.536719317989704 24.723598687892352 40 25.09536996068029 24.606872663177906 25.938006875229814 24.359750500911993 41 24.013589766051364 24.827603138211536 26.318314993993518 24.840492101743582 42 24.70546486474121 24.80372228803095 26.07917171391411 24.41164113331373 43 24.206422051621693 24.0071731824748 26.309610758880968 25.47679400702253 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 206.0 1 219.0 2 232.0 3 279.5 4 327.0 5 327.0 6 556.5 7 786.0 8 780.5 9 775.0 10 1121.5 11 1468.0 12 1468.0 13 2689.5 14 3911.0 15 5569.0 16 7227.0 17 6600.5 18 5974.0 19 5974.0 20 7521.5 21 9069.0 22 9101.5 23 9134.0 24 11289.0 25 13444.0 26 13444.0 27 16428.5 28 19413.0 29 22531.5 30 25650.0 31 30440.5 32 35231.0 33 35231.0 34 41518.5 35 47806.0 36 57295.0 37 66784.0 38 75406.0 39 84028.0 40 84028.0 41 93148.0 42 102268.0 43 109933.0 44 117598.0 45 128279.5 46 138961.0 47 138961.0 48 148978.5 49 158996.0 50 161001.0 51 163006.0 52 161130.5 53 159255.0 54 159255.0 55 151804.0 56 144353.0 57 137789.5 58 131226.0 59 121262.5 60 111299.0 61 111299.0 62 94292.0 63 77285.0 64 67329.0 65 57373.0 66 47878.5 67 38384.0 68 38384.0 69 31616.0 70 24848.0 71 20549.5 72 16251.0 73 12175.5 74 8100.0 75 8100.0 76 6315.5 77 4531.0 78 3803.5 79 3076.0 80 2404.0 81 1732.0 82 1732.0 83 1357.0 84 982.0 85 864.0 86 746.0 87 507.5 88 269.0 89 269.0 90 198.0 91 127.0 92 82.0 93 37.0 94 42.5 95 48.0 96 48.0 97 27.5 98 7.0 99 7.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1792231.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.33839170129137 #Duplication Level Percentage of deduplicated Percentage of total 1 83.77187393709868 49.70888269230762 2 8.518397048907197 10.109359615103596 3 2.85580022422668 5.083757769773953 4 1.3985059287158836 3.319403703788854 5 0.8344471837965316 2.475737692307903 6 0.5379819001066587 1.9153788430040353 7 0.40758193454725944 1.6929679537774769 8 0.28760360950537656 1.3652748508428225 9 0.20735540630207505 1.1073722688479657 >10 1.0564677665217972 10.820464905651223 >50 0.06392373250806486 2.635666642473172 >100 0.054395687693617925 6.736325244936338 >500 0.003965948049141993 1.5501159187367965 >1k 0.001699692021060854 1.4792918984482257 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 2867 0.1599682183825634 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2819 0.1572899921940866 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 2383 0.1329627709820888 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 1.1159275785320085E-4 15 0.0 0.0 0.0 0.0 1.6738913677980126E-4 16 0.0 0.0 0.0 5.5796378926600423E-5 1.6738913677980126E-4 17 0.0 0.0 0.0 5.5796378926600423E-5 1.6738913677980126E-4 18 0.0 0.0 0.0 5.5796378926600423E-5 1.6738913677980126E-4 19 0.0 0.0 0.0 5.5796378926600423E-5 1.6738913677980126E-4 20 0.0 0.0 0.0 5.5796378926600423E-5 1.6738913677980126E-4 21 0.0 0.0 0.0 2.231855157064017E-4 1.6738913677980126E-4 22 0.0 0.0 0.0 3.9057465248620296E-4 1.6738913677980126E-4 23 0.0 0.0 0.0 7.811493049724059E-4 2.789818946330021E-4 24 0.0 0.0 0.0 0.0011717239574586089 2.789818946330021E-4 25 0.0 0.0 0.0 0.0020086696413576153 3.3477827355960253E-4 26 0.0 0.0 0.0 0.0031245972198896237 3.9057465248620296E-4 27 0.0 0.0 0.0 0.010433922859274278 3.9057465248620296E-4 28 0.0 0.0 0.0 0.022764922602052973 3.9057465248620296E-4 29 0.0 0.0 0.0 0.040619763858565104 3.9057465248620296E-4 30 0.0 0.0 0.0 0.06890852797435153 3.9057465248620296E-4 31 0.0 0.0 0.0 0.1596892364879304 3.9057465248620296E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTATA 45 0.0038266303 20.555557 2 AAGACGG 655 0.0 19.770992 5 CAAGACG 675 0.0 19.185184 4 ACGGACC 710 0.0 18.5 8 CGCAAGA 750 0.0 17.759998 2 TAGAGTG 285 0.0 16.877193 5 GACGGAC 770 0.0 16.818182 7 CGGACCA 770 0.0 16.57792 9 GGGTTAG 160 6.2937033E-10 16.1875 1 GCGCAAG 800 0.0 16.187498 1 TAAGACT 275 0.0 16.145454 4 ATACCGT 415 0.0 16.048193 6 TACCGTC 420 0.0 15.857144 7 ACCGTCG 400 0.0 15.724999 8 GTAAGAC 165 9.749783E-10 15.69697 3 TTAGAGT 310 0.0 15.5161295 4 GGACCGT 155 7.215931E-9 15.5161295 6 TGTGCGA 110 1.4526902E-5 15.136364 10 GCAAGAC 980 0.0 15.10204 3 GTATACT 135 3.975456E-7 15.074075 4 >>END_MODULE