##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727214.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3287020 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.97491192630407 31.0 31.0 33.0 28.0 34.0 2 31.229034201191354 31.0 31.0 34.0 28.0 34.0 3 31.381454934865015 31.0 31.0 34.0 28.0 34.0 4 35.21865397837555 35.0 35.0 37.0 33.0 37.0 5 35.00291844892943 35.0 35.0 37.0 32.0 37.0 6 35.01071395975686 36.0 35.0 37.0 32.0 37.0 7 34.930619831945044 36.0 35.0 37.0 32.0 37.0 8 34.91822806067502 36.0 35.0 37.0 32.0 37.0 9 36.4746043528789 38.0 35.0 39.0 32.0 39.0 10 36.178445522083834 38.0 35.0 39.0 32.0 39.0 11 36.34266782678536 38.0 35.0 39.0 32.0 39.0 12 36.169392337132116 38.0 35.0 39.0 31.0 39.0 13 36.250900815936625 38.0 35.0 39.0 32.0 39.0 14 37.23770466866645 39.0 36.0 40.0 32.0 41.0 15 37.24604687528521 39.0 36.0 40.0 32.0 41.0 16 37.18992004916307 39.0 36.0 40.0 31.0 41.0 17 37.121274284914605 39.0 36.0 40.0 31.0 41.0 18 37.03343240990319 39.0 36.0 40.0 31.0 41.0 19 37.03660853904144 39.0 36.0 40.0 31.0 41.0 20 36.91838565022422 39.0 36.0 40.0 31.0 41.0 21 36.79808184921296 39.0 36.0 40.0 30.0 41.0 22 36.7181416602272 39.0 35.0 40.0 30.0 41.0 23 36.60499996957731 38.0 35.0 40.0 30.0 41.0 24 36.45425217978595 38.0 35.0 40.0 30.0 41.0 25 36.31030416608357 38.0 35.0 40.0 30.0 41.0 26 36.06748696387609 38.0 34.0 40.0 29.0 41.0 27 35.90587157972875 38.0 34.0 40.0 27.0 41.0 28 35.664047069990445 38.0 34.0 40.0 27.0 41.0 29 35.62159980772858 38.0 34.0 40.0 27.0 41.0 30 35.55425491782831 38.0 34.0 40.0 27.0 41.0 31 35.74497234577216 38.0 34.0 40.0 27.0 41.0 32 35.7506756880092 38.0 34.0 40.0 27.0 41.0 33 35.76710363794562 38.0 34.0 40.0 27.0 41.0 34 35.840289684881746 38.0 34.0 40.0 28.0 41.0 35 35.63281817573365 38.0 34.0 40.0 27.0 41.0 36 35.59940036872304 38.0 34.0 40.0 27.0 41.0 37 35.544408917499744 38.0 34.0 40.0 27.0 41.0 38 35.464586160108546 38.0 34.0 40.0 26.0 41.0 39 35.4012798826901 38.0 34.0 40.0 26.0 41.0 40 35.233269344269274 38.0 33.0 40.0 26.0 41.0 41 35.18635085883262 38.0 33.0 40.0 26.0 41.0 42 34.99678280022634 38.0 33.0 40.0 25.0 41.0 43 34.66195064222305 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 4.0 14 7.0 15 26.0 16 63.0 17 136.0 18 292.0 19 642.0 20 1444.0 21 2913.0 22 5331.0 23 9407.0 24 15129.0 25 23364.0 26 34231.0 27 48196.0 28 65431.0 29 85675.0 30 109221.0 31 134017.0 32 162053.0 33 194268.0 34 234399.0 35 280460.0 36 343746.0 37 428305.0 38 601350.0 39 506909.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.2130136111128 19.86315872735791 12.496121106655876 26.42770655487341 2 19.40934341744194 22.095150014298664 33.00338908798851 25.49211748027088 3 20.459899848494988 23.475853508649173 30.082932260832003 25.98131438202384 4 15.62409112204976 15.954603257661956 34.49769091760926 33.923614702679025 5 14.703013671958187 37.38319207062932 33.6613406672305 14.252453590181988 6 35.281622868129794 35.76315325127319 15.122177534666658 13.833046345930356 7 29.47408290792268 31.700719800913895 20.524669761668623 18.3005275294948 8 28.119147434454305 33.889997627029956 19.438275398385162 18.552579540130573 9 28.33347530590018 13.19785094097389 17.93204787314954 40.53662587997639 10 16.484140650193794 26.236195703098858 32.83582089552239 24.443842751184963 11 38.276767406343744 20.965890076726033 20.627772267890066 20.129570249040164 12 21.99679344816886 24.37393140291206 28.963590121143163 24.66568502777592 13 30.632213981052747 18.822976434582085 24.41810515299572 26.126704431369447 14 22.931135192362685 19.770034864406057 24.1490164343387 33.14981350889255 15 26.04584091365431 27.406647966851434 21.171912553011545 25.37559856648271 16 25.616029108432564 25.839179560818003 23.45975990410767 25.085031426641763 17 24.679679466507658 25.55244568028184 24.107824108158756 25.66005074505175 18 24.805203497392775 25.117066522260284 25.291418975242014 24.786311005104928 19 25.793515098782482 24.954670187586323 25.10997803481573 24.141836678815462 20 25.223180875078338 23.93879562643367 24.68196116847479 26.156062330013203 21 25.946480398658966 24.893976915260634 25.026954505905046 24.132588180175357 22 26.369690479522482 24.071316876684655 24.177644188352975 25.381348455439884 23 24.97952552768161 24.361579789596654 25.033069467176954 25.62582521554478 24 24.73127635365772 24.506087580848305 25.09829572074402 25.66434034474996 25 25.599448740804743 23.69550535135168 24.627200321263636 26.07784558657994 26 24.916276749152726 24.916033367609565 25.157863353432592 25.009826529805114 27 26.400843317047052 24.45160053787321 24.171863876702908 24.97569226837683 28 24.80422997122013 25.521384110835953 24.468241750886822 25.206144167057094 29 25.058624529208828 25.253086382194205 24.933039652937918 24.755249435659046 30 25.801607535092575 25.142165243898727 24.438640470699905 24.61758675030879 31 25.399297844247982 25.05908086960225 24.535171675256006 25.00644961089376 32 25.331151012162994 24.852723743694895 24.063224440374565 25.75290080376755 33 24.59209253366271 24.483939860420683 24.783420849279896 26.140546756636713 34 25.732091681827306 24.681170178459517 25.31606135648703 24.270676783226143 35 25.699995740822995 24.291577173245066 25.244598450876477 24.76382863505546 36 24.599059330335685 25.01676290378519 25.295069698389423 25.0891080674897 37 25.106114352818054 24.858473632652068 25.48575913745581 24.549652877074067 38 25.17991980578153 24.08056537532476 25.35950496194121 25.380009856952494 39 24.774689536419007 24.47791616722746 25.64359206819551 25.103802228158028 40 25.587857694811717 23.870314144726834 25.89990325583659 24.641924904624858 41 24.07271632055783 24.55695432336889 26.2662533236792 25.104076032394083 42 24.800457557301144 24.251997249788563 26.2569439796533 24.690601213256993 43 24.13794257412489 23.301805282596394 26.202578627449785 26.357673515828928 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 162.0 1 184.0 2 206.0 3 339.5 4 473.0 5 473.0 6 803.5 7 1134.0 8 1092.0 9 1050.0 10 1398.5 11 1747.0 12 1747.0 13 3052.0 14 4357.0 15 7027.5 16 9698.0 17 9078.0 18 8458.0 19 8458.0 20 10179.0 21 11900.0 22 12174.0 23 12448.0 24 16016.0 25 19584.0 26 19584.0 27 24352.0 28 29120.0 29 34969.5 30 40819.0 31 49370.5 32 57922.0 33 57922.0 34 68934.5 35 79947.0 36 97315.5 37 114684.0 38 132182.0 39 149680.0 40 149680.0 41 167266.5 42 184853.0 43 198249.5 44 211646.0 45 233620.5 46 255595.0 47 255595.0 48 279533.0 49 303471.0 50 311132.5 51 318794.0 52 313638.5 53 308483.0 54 308483.0 55 293822.5 56 279162.0 57 263748.5 58 248335.0 59 228350.0 60 208365.0 61 208365.0 62 175885.0 63 143405.0 64 125340.5 65 107276.0 66 88980.0 67 70684.0 68 70684.0 69 57248.0 70 43812.0 71 35870.5 72 27929.0 73 20691.0 74 13453.0 75 13453.0 76 10327.5 77 7202.0 78 6126.5 79 5051.0 80 3876.5 81 2702.0 82 2702.0 83 2140.0 84 1578.0 85 1355.0 86 1132.0 87 774.5 88 417.0 89 417.0 90 275.0 91 133.0 92 100.0 93 67.0 94 71.5 95 76.0 96 76.0 97 41.0 98 6.0 99 5.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3287020.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.48326969180994 #Duplication Level Percentage of deduplicated Percentage of total 1 80.4469969524834 41.41674440000915 2 9.905435749948403 10.199284402589786 3 3.4400390460055474 5.3131337386758055 4 1.7413190832243741 3.585951999245427 5 0.9850724388190832 2.53573750168459 6 0.6656578137553035 2.056214444881493 7 0.4541074016364644 1.6365253679248009 8 0.35541628424808 1.463839393184391 9 0.27086889417725285 1.255069469704485 >10 1.5711499451923432 14.583751803015351 >50 0.09172071794627677 3.2297186374510756 >100 0.05944198790847642 6.277409282769857 >500 0.009446585396650442 3.338594032574966 >1k 0.0033270992582399945 3.108025526288733 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4661 0.14180017158398792 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 4088 0.12436796855510462 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3343 0.10170306234826682 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.12680786852529E-5 2 0.0 0.0 0.0 0.0 9.12680786852529E-5 3 0.0 0.0 0.0 0.0 9.12680786852529E-5 4 0.0 0.0 0.0 0.0 1.521134644754215E-4 5 0.0 0.0 0.0 0.0 1.521134644754215E-4 6 0.0 0.0 0.0 0.0 2.129588502655901E-4 7 0.0 0.0 0.0 0.0 2.129588502655901E-4 8 0.0 0.0 0.0 0.0 2.129588502655901E-4 9 0.0 0.0 0.0 3.04226928950843E-5 3.954950076360959E-4 10 0.0 0.0 0.0 3.04226928950843E-5 3.954950076360959E-4 11 0.0 0.0 0.0 3.04226928950843E-5 3.954950076360959E-4 12 0.0 0.0 0.0 3.04226928950843E-5 3.954950076360959E-4 13 0.0 0.0 0.0 3.04226928950843E-5 4.563403934262645E-4 14 0.0 0.0 0.0 3.04226928950843E-5 5.780311650066017E-4 15 0.0 0.0 0.0 6.08453857901686E-5 7.301446294820232E-4 16 0.0 0.0 0.0 9.12680786852529E-5 8.214127081672761E-4 17 0.0 0.0 0.0 1.216907715803372E-4 8.214127081672761E-4 18 0.0 0.0 0.0 1.521134644754215E-4 9.12680786852529E-4 19 0.0 0.0 0.0 1.521134644754215E-4 9.12680786852529E-4 20 0.0 0.0 0.0 3.04226928950843E-4 9.12680786852529E-4 21 0.0 0.0 0.0 4.867630863213488E-4 9.735261726426976E-4 22 0.0 0.0 0.0 7.909900152721918E-4 9.735261726426976E-4 23 0.0 0.0 0.0 0.001308175794488625 0.0011256396371181192 24 0.0 0.0 0.0 0.0019470523452853952 0.0011256396371181192 25 0.0 0.0 0.0 0.0021295885026559012 0.0011256396371181192 26 0.0 0.0 0.0 0.0030726919824035142 0.0011256396371181192 27 0.0 0.0 0.0 0.00982652980511223 0.0011560623300132034 28 0.0 0.0 0.0 0.023303782757634575 0.0011560623300132034 29 0.0 3.04226928950843E-5 0.0 0.04307853313943937 0.0011560623300132034 30 0.0 3.04226928950843E-5 0.0 0.07337953526294333 0.0011560623300132034 31 0.0 3.04226928950843E-5 0.0 0.19075028445217856 0.0011864850229082878 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1025 0.0 18.048782 5 GGTATCA 2275 0.0 17.80879 1 CAAGACG 1080 0.0 17.643518 4 ATACCGT 805 0.0 15.857143 6 GACGGAC 1135 0.0 15.810573 7 ACGGACC 1145 0.0 15.672488 8 TCGTTAC 860 0.0 15.058139 23 TACCGTC 770 0.0 14.896105 7 ACCGTCG 800 0.0 14.799999 8 CGGACCA 1245 0.0 14.413654 9 AGACGGA 1310 0.0 14.40458 6 TCGTTTA 610 0.0 14.254099 30 CGCAAGA 1380 0.0 13.807971 2 CCGTCGT 870 0.0 13.609196 9 CTTATAC 890 0.0 13.511235 37 GCGCAAG 1385 0.0 13.490974 1 CTGTGCG 510 0.0 13.421569 9 CGTCGTA 855 0.0 13.415205 10 TACGGAT 1610 0.0 13.329193 27 GAGCGAA 1320 0.0 13.314394 16 >>END_MODULE