##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727213.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3048357 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.97010947208611 31.0 31.0 33.0 28.0 34.0 2 31.224357908210884 31.0 31.0 34.0 28.0 34.0 3 31.37442924171939 31.0 31.0 34.0 28.0 34.0 4 35.21314924728304 35.0 35.0 37.0 33.0 37.0 5 35.0001879701098 35.0 35.0 37.0 32.0 37.0 6 35.00220085770794 36.0 35.0 37.0 32.0 37.0 7 34.92192449900061 36.0 35.0 37.0 32.0 37.0 8 34.91313878262946 36.0 35.0 37.0 32.0 37.0 9 36.46260231331173 38.0 35.0 39.0 32.0 39.0 10 36.171697081411395 38.0 35.0 39.0 32.0 39.0 11 36.337377479081354 38.0 35.0 39.0 32.0 39.0 12 36.164690684194795 38.0 35.0 39.0 31.0 39.0 13 36.24543811633611 38.0 35.0 39.0 32.0 39.0 14 37.22284463401104 39.0 36.0 40.0 31.0 41.0 15 37.23950672444205 39.0 36.0 40.0 31.0 41.0 16 37.17957542374466 39.0 36.0 40.0 31.0 41.0 17 37.12635527925371 39.0 36.0 40.0 31.0 41.0 18 37.04065435905309 39.0 36.0 40.0 31.0 41.0 19 37.056770253615305 39.0 36.0 40.0 31.0 41.0 20 36.937534875344326 39.0 36.0 40.0 31.0 41.0 21 36.82402618853369 39.0 36.0 40.0 30.0 41.0 22 36.745749923647395 39.0 35.0 40.0 30.0 41.0 23 36.63384111506625 38.0 35.0 40.0 30.0 41.0 24 36.49155331872218 38.0 35.0 40.0 30.0 41.0 25 36.34351061899902 38.0 35.0 40.0 30.0 41.0 26 36.10770424855094 38.0 34.0 40.0 29.0 41.0 27 35.947086578114046 38.0 34.0 40.0 28.0 41.0 28 35.70974233004861 38.0 34.0 40.0 27.0 41.0 29 35.671327866125914 38.0 34.0 40.0 27.0 41.0 30 35.617148844443086 38.0 34.0 40.0 27.0 41.0 31 35.78219939462471 38.0 34.0 40.0 27.0 41.0 32 35.799926649011255 38.0 34.0 40.0 28.0 41.0 33 35.81894148224765 38.0 34.0 40.0 28.0 41.0 34 35.89601250772137 38.0 34.0 40.0 28.0 41.0 35 35.69056872275787 38.0 34.0 40.0 27.0 41.0 36 35.655760463751456 38.0 34.0 40.0 27.0 41.0 37 35.60549010499754 38.0 34.0 40.0 27.0 41.0 38 35.54061614174455 38.0 34.0 40.0 27.0 41.0 39 35.475557160791865 38.0 34.0 40.0 26.0 41.0 40 35.309790487137825 38.0 33.0 40.0 26.0 41.0 41 35.268335040810506 38.0 33.0 40.0 26.0 41.0 42 35.08279509256954 38.0 33.0 40.0 25.0 41.0 43 34.76114083750689 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 4.0 14 7.0 15 15.0 16 60.0 17 123.0 18 231.0 19 577.0 20 1199.0 21 2572.0 22 4760.0 23 8484.0 24 13740.0 25 21276.0 26 31296.0 27 44257.0 28 60078.0 29 78850.0 30 100311.0 31 123478.0 32 150151.0 33 179664.0 34 216026.0 35 260696.0 36 317485.0 37 394114.0 38 553435.0 39 485468.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.43473254608958 20.287321990173723 13.066087731850304 26.21185773188639 2 18.923242914133745 22.09019481642078 34.04253504428779 24.944027225157683 3 20.191696707439448 23.611866982771375 30.568040423086927 25.62839588670225 4 15.47614009776414 16.32390825615241 34.758756930372655 33.44119471571079 5 14.439975370338843 37.65339820762463 33.90521517000798 14.00141125202855 6 34.763677613875274 36.107057014647566 15.304703484532817 13.824561886944345 7 28.809191311909988 32.198951763195716 20.819510313260555 18.172346611633742 8 27.598243906471588 34.829352336356926 19.53183304973794 18.040570707433545 9 28.30741281286936 13.566422830396832 18.327905819429944 39.798258537303866 10 16.293728064003002 26.87985691964557 33.02592183264624 23.80049318370519 11 37.76624588261808 21.410746838378838 20.841522170795614 19.98148510820747 12 21.66557263470125 24.690513611102638 29.2723260431767 24.37158771101941 13 30.463820346501407 19.300921775238265 24.520618812035465 25.714639066224855 14 22.60988460341095 20.199996260280535 24.645833804898835 32.544285331409675 15 25.877776126615093 27.807176127992882 21.50778271705053 24.807265028341497 16 24.971681466442412 26.42430004097289 24.0377357376449 24.56628275493979 17 24.281801639374915 25.935249709925706 24.493751880111155 25.289196770588223 18 24.219243349778257 25.782282062107555 25.760401422799234 24.238073165314955 19 25.42999392787656 25.42280972996273 25.623475203199625 23.523721138961086 20 24.704291524909976 24.402259971519083 25.194850865564632 25.69859763800631 21 25.441245890819218 25.40844133413508 25.639090172181277 23.51122260286443 22 25.98826187352728 24.449301705804142 24.566774823290054 24.995661597378522 23 24.546796848269413 24.915684088182584 25.513547133751068 25.023971929796936 24 24.25719822186181 24.82862079474287 25.678291617418825 25.235889365976494 25 25.14026408324222 24.165411072259584 25.002648967952247 25.691675876545954 26 24.426600952578717 25.27039975960821 25.695382791451266 24.60761649636181 27 25.925178711023676 24.91643859298632 24.748643285546937 24.40973941044307 28 24.33806145408822 26.169703876547267 24.67499705579104 24.817237613573475 29 24.55637577882118 25.860455320685865 25.482087563890975 24.10108133660198 30 25.669565605340843 25.44364062345716 24.719676861994838 24.167116909207156 31 24.931528689061025 25.53818335582086 25.170411470834946 24.35987648428317 32 24.912174000617384 25.30231859326188 24.607026014341496 25.178481391779243 33 24.147040520516462 24.850763870504668 25.230214177670135 25.77198143130873 34 25.185304739569546 25.145709639651788 25.971728376958474 23.697257243820196 35 25.238054466717646 24.599284138964038 25.720806322881472 24.441855071436844 36 24.133196997595753 25.18136819276745 26.04671959353842 24.63871521609838 37 24.502149846622295 25.07104646863868 26.20516560232283 24.2216380824162 38 24.706325407424394 24.26067550487033 25.931280358566926 25.10171872913835 39 24.039179138139005 24.742082374210106 26.51680889082217 24.701929596828716 40 24.96895868823763 24.01306671101843 26.66557755538475 24.35239704535919 41 23.535661997594115 24.677621420325767 27.1011236544801 24.685592927600013 42 23.98941462564916 24.586719993754013 27.041911429665227 24.3819539509316 43 23.316593168057416 23.696240302562988 26.897341748358215 26.08982478102138 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 236.0 1 258.0 2 280.0 3 452.5 4 625.0 5 625.0 6 986.5 7 1348.0 8 1318.5 9 1289.0 10 1761.0 11 2233.0 12 2233.0 13 3790.5 14 5348.0 15 8406.0 16 11464.0 17 10965.5 18 10467.0 19 10467.0 20 12407.0 21 14347.0 22 15112.0 23 15877.0 24 19865.5 25 23854.0 26 23854.0 27 29252.0 28 34650.0 29 40775.0 30 46900.0 31 55477.5 32 64055.0 33 64055.0 34 75481.5 35 86908.0 36 101784.5 37 116661.0 38 131161.0 39 145661.0 40 145661.0 41 160998.5 42 176336.0 43 188570.0 44 200804.0 45 220268.0 46 239732.0 47 239732.0 48 260033.5 49 280335.0 50 285804.0 51 291273.0 52 286976.5 53 282680.0 54 282680.0 55 266195.0 56 249710.0 57 233199.0 58 216688.0 59 196877.0 60 177066.0 61 177066.0 62 148839.5 63 120613.0 64 104777.5 65 88942.0 66 73565.0 67 58188.0 68 58188.0 69 46823.5 70 35459.0 71 28959.0 72 22459.0 73 16647.5 74 10836.0 75 10836.0 76 8371.0 77 5906.0 78 5008.5 79 4111.0 80 3208.0 81 2305.0 82 2305.0 83 1768.5 84 1232.0 85 1063.0 86 894.0 87 617.0 88 340.0 89 340.0 90 237.0 91 134.0 92 94.5 93 55.0 94 54.0 95 53.0 96 53.0 97 27.5 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3048357.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.16129770546989 #Duplication Level Percentage of deduplicated Percentage of total 1 81.46501512948804 44.93715952138299 2 9.797400609057444 10.808746634719393 3 3.2272362928115514 5.340556257410251 4 1.5976776044151733 3.5251987989802926 5 0.9075402019762165 2.503054763044618 6 0.5975963220588267 1.9778513177268482 7 0.4245503030139818 1.639312195885119 8 0.3127423086830774 1.3801017275490557 9 0.23134547840649908 1.1485185126475725 >10 1.2985378204286078 12.745193588831869 >50 0.07657001590256174 2.8905428765779484 >100 0.05433394216882805 6.174628546729776 >500 0.0070007257973076 2.5643279853384984 >1k 0.002393410528687184 2.1906020924614267 >5k 5.9835263217179605E-5 0.17420518071435004 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5278 0.17314245017889965 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3816 0.12518218830668454 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3324 0.10904234641808686 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 3320 0.10891112819135029 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 3.2804556684141655E-5 6 0.0 0.0 0.0 0.0 6.560911336828331E-5 7 0.0 0.0 0.0 0.0 6.560911336828331E-5 8 0.0 0.0 0.0 0.0 6.560911336828331E-5 9 0.0 0.0 0.0 3.2804556684141655E-5 9.841367005242496E-5 10 0.0 0.0 0.0 3.2804556684141655E-5 9.841367005242496E-5 11 0.0 0.0 0.0 3.2804556684141655E-5 1.3121822673656662E-4 12 0.0 0.0 0.0 3.2804556684141655E-5 1.3121822673656662E-4 13 0.0 0.0 0.0 6.560911336828331E-5 1.3121822673656662E-4 14 0.0 0.0 0.0 6.560911336828331E-5 1.9682734010484991E-4 15 0.0 0.0 0.0 6.560911336828331E-5 1.9682734010484991E-4 16 0.0 0.0 0.0 9.841367005242496E-5 1.9682734010484991E-4 17 0.0 0.0 0.0 1.3121822673656662E-4 2.296318967889916E-4 18 0.0 0.0 0.0 1.3121822673656662E-4 2.6243645347313324E-4 19 0.0 0.0 0.0 1.3121822673656662E-4 2.6243645347313324E-4 20 0.0 0.0 0.0 1.6402278342070827E-4 2.6243645347313324E-4 21 0.0 0.0 0.0 1.6402278342070827E-4 3.2804556684141653E-4 22 0.0 0.0 0.0 2.952410101572749E-4 3.2804556684141653E-4 23 0.0 0.0 0.0 5.576774636304081E-4 3.608501235255582E-4 24 0.0 0.0 0.0 0.0011153549272608161 3.608501235255582E-4 25 0.0 0.0 0.0 0.0015418141641546578 3.608501235255582E-4 26 0.0 0.0 0.0 0.002952410101572749 3.608501235255582E-4 27 0.0 0.0 0.0 0.010399044468872904 3.608501235255582E-4 28 0.0 0.0 0.0 0.02837594153178253 3.608501235255582E-4 29 0.0 0.0 0.0 0.056095791929882226 3.608501235255582E-4 30 0.0 0.0 0.0 0.09920097941284436 3.608501235255582E-4 31 0.0 0.0 0.0 0.29776696102195377 3.608501235255582E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2225 0.0 20.370787 1 AAGACGG 850 0.0 16.32353 5 CTTATAC 1280 0.0 16.042969 37 ACCGTCG 560 0.0 15.857142 8 TACCGTC 590 0.0 15.677966 7 TACTTAC 1040 0.0 15.653846 31 GACGGTA 700 0.0 15.592856 8 CAAGACG 905 0.0 15.535912 4 CGACGGT 720 0.0 15.416666 7 TCTTATA 2065 0.0 15.319612 37 CCGTCGT 570 0.0 15.254386 9 TTACGCC 85 5.3677615E-4 15.235294 4 TATACCG 170 1.4897523E-9 15.235294 5 GTGCGTA 135 3.9781116E-7 15.074075 15 TACGACG 725 0.0 15.055173 5 AGTGTAC 1095 0.0 15.0365305 27 GTACTTA 1160 0.0 14.991379 30 CGTCGTA 585 0.0 14.863247 10 ACGACGG 760 0.0 14.848682 6 TACCGAC 140 6.003738E-7 14.535714 7 >>END_MODULE