##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727212.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4314374 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.310324047011225 31.0 31.0 34.0 30.0 34.0 2 31.52409040106398 31.0 31.0 34.0 30.0 34.0 3 31.6774373292626 31.0 31.0 34.0 30.0 34.0 4 35.47863861593826 37.0 35.0 37.0 33.0 37.0 5 35.325120631637404 37.0 35.0 37.0 33.0 37.0 6 35.35076861672169 37.0 35.0 37.0 33.0 37.0 7 35.24725974150595 37.0 35.0 37.0 32.0 37.0 8 35.275346319072014 37.0 35.0 37.0 32.0 37.0 9 36.844300702720716 39.0 37.0 39.0 33.0 39.0 10 36.57947873781921 39.0 35.0 39.0 32.0 39.0 11 36.750095610626246 39.0 35.0 39.0 32.0 39.0 12 36.62326261005652 39.0 35.0 39.0 32.0 39.0 13 36.682985990551586 39.0 35.0 39.0 32.0 39.0 14 37.693288528069196 39.0 37.0 41.0 32.0 41.0 15 37.687896552315586 39.0 37.0 41.0 32.0 41.0 16 37.6361738690248 39.0 36.0 41.0 32.0 41.0 17 37.659049493622945 39.0 36.0 41.0 32.0 41.0 18 37.61248097638267 39.0 36.0 41.0 32.0 41.0 19 37.637709665411485 39.0 37.0 41.0 32.0 41.0 20 37.58404417419538 39.0 36.0 41.0 32.0 41.0 21 37.4900309987034 39.0 36.0 41.0 32.0 41.0 22 37.42038497357902 39.0 36.0 41.0 32.0 41.0 23 37.30498468607497 39.0 36.0 41.0 31.0 41.0 24 37.16725439194655 39.0 36.0 41.0 31.0 41.0 25 37.05123617006778 39.0 36.0 40.0 31.0 41.0 26 36.81679729202892 39.0 35.0 40.0 30.0 41.0 27 36.6481633256644 39.0 35.0 40.0 30.0 41.0 28 36.42046656131341 38.0 35.0 40.0 30.0 41.0 29 36.334477724926025 38.0 35.0 40.0 30.0 41.0 30 36.2019588473322 38.0 35.0 40.0 30.0 41.0 31 36.27737604574847 38.0 35.0 40.0 30.0 41.0 32 36.19872222482335 38.0 35.0 40.0 30.0 41.0 33 36.13307956148447 38.0 35.0 40.0 30.0 41.0 34 36.141310419541746 38.0 35.0 40.0 30.0 41.0 35 35.90073461410624 38.0 35.0 40.0 29.0 41.0 36 35.82916061519006 38.0 35.0 40.0 28.0 41.0 37 35.70683695942911 38.0 34.0 40.0 27.0 41.0 38 35.57069716255475 38.0 34.0 40.0 27.0 41.0 39 35.458328601090216 38.0 34.0 40.0 27.0 41.0 40 35.203386864467475 38.0 34.0 40.0 26.0 41.0 41 35.07719659908946 38.0 34.0 40.0 25.0 41.0 42 34.80851335558762 38.0 33.0 40.0 24.0 41.0 43 34.408701470943406 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 4.0 14 9.0 15 28.0 16 99.0 17 203.0 18 334.0 19 663.0 20 1410.0 21 2742.0 22 5031.0 23 8558.0 24 14437.0 25 22118.0 26 33595.0 27 49037.0 28 68691.0 29 92613.0 30 119684.0 31 152113.0 32 188378.0 33 233729.0 34 293397.0 35 362062.0 36 456423.0 37 607414.0 38 777700.0 39 823900.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.75163117522959 19.129495959321098 13.013498597942599 24.10537426750671 2 17.548617713716986 23.98456879259888 34.01394964831515 24.45286384536899 3 20.37210960384983 25.953313273258182 29.881438187788078 23.79313893510391 4 14.44561829827456 15.923677455871928 33.849406657837264 35.781297588016244 5 13.933632086601671 38.875025670004504 32.549843847566294 14.64149839582753 6 33.42679610066258 34.73414683103505 16.49972858171313 15.339328486589249 7 27.526751273765328 32.233366880108214 21.851003181458076 18.388878664668383 8 28.739534402905264 32.570797061172726 20.54022205770756 18.149446478214454 9 28.38968063501217 13.23656688084992 20.015279157532472 38.358473326605434 10 17.469672309354728 27.497407503382874 31.570350646466906 23.46256954079549 11 35.112625840967894 23.27540449668944 20.656670005891932 20.955299656450737 12 21.48726559171736 26.9962223951841 29.280887563294232 22.235624449804305 13 30.06542780018607 19.581913853550944 25.62888613736315 24.72377220889983 14 23.01963158502253 21.488679470069123 26.193973911394792 29.297715033513555 15 25.63674359246556 27.611027694863726 23.507720934717298 23.24450777795342 16 23.381144054734243 26.29092888099177 26.247631753760803 24.080295310513183 17 23.26045447149459 26.899313782254392 26.429257176127983 23.410974570123035 18 23.051524972104875 24.507402464413143 28.784917580163427 23.656154983318554 19 23.105669559477228 26.507692657150262 28.794791550292114 21.591846233080396 20 23.04299534532704 25.173988161434313 28.4867978529446 23.29621864029405 21 23.96500627901058 26.19172561303216 28.116523973118696 21.726744134838565 22 24.029534759851604 25.652273076001293 27.12792168690058 23.190270477246525 23 22.145599801964316 26.1057108169111 28.022535830227053 23.726153550897536 24 22.1675728622507 27.310798739284074 27.820188977589794 22.701439420875428 25 22.926408327140855 25.88540075570639 27.156106540601254 24.0320843765515 26 22.457000714356244 26.984610050032753 28.13571563336883 22.42267360224218 27 23.611977079409435 26.561559104518988 26.98776230340717 22.83870151266441 28 22.11838843827633 27.34922841645161 28.206247302621424 22.326135842650636 29 22.267193340215755 27.206310811255584 28.437057148962978 22.089438699565683 30 22.26874628856933 27.88719754012981 28.168049408790246 21.67600676251062 31 22.64316909011597 27.381631726873934 27.170801604126115 22.804397578883982 32 21.53950955573161 27.62171290666966 27.43049165417741 23.408285883421325 33 21.418333227485608 27.15399731224043 28.051601460605873 23.376067999668088 34 22.3770818199813 27.211641827991734 28.224001906186157 22.18727444584081 35 22.370406459894298 27.159954143984738 28.524091791763993 21.94554760435697 36 21.508867798665577 27.54603564735 28.05760464901745 22.88749190496698 37 21.68421189261756 27.27475643048099 28.360429577964265 22.68060209893718 38 21.527062790569385 26.539516509231696 28.751795741398407 23.181624958800512 39 21.754025033527462 26.03109976093867 28.733554392827326 23.48132081270655 40 21.729989101547524 26.448726976381742 29.281698804971473 22.539585117099257 41 20.533199022616028 26.82901389633815 29.775629094742367 22.86215798630346 42 21.422806645877245 26.92297886089616 29.42215950680215 22.232054986424448 43 20.504481067241738 25.861388002060092 29.479525882549822 24.154605048148355 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2122.0 1 2170.5 2 2219.0 3 4758.0 4 7297.0 5 7297.0 6 11008.0 7 14719.0 8 13954.5 9 13190.0 10 17392.0 11 21594.0 12 21594.0 13 36825.5 14 52057.0 15 79122.0 16 106187.0 17 92835.0 18 79483.0 19 79483.0 20 80653.0 21 81823.0 22 63361.0 23 44899.0 24 50283.0 25 55667.0 26 55667.0 27 61536.5 28 67406.0 29 73162.0 30 78918.0 31 84080.0 32 89242.0 33 89242.0 34 100900.5 35 112559.0 36 131856.5 37 151154.0 38 171672.0 39 192190.0 40 192190.0 41 211988.0 42 231786.0 43 244583.5 44 257381.0 45 285114.5 46 312848.0 47 312848.0 48 351693.5 49 390539.0 50 384777.0 51 379015.0 52 346594.5 53 314174.0 54 314174.0 55 300840.0 56 287506.0 57 275189.0 58 262872.0 59 243107.5 60 223343.0 61 223343.0 62 187910.5 63 152478.0 64 134615.0 65 116752.0 66 98251.0 67 79750.0 68 79750.0 69 65939.5 70 52129.0 71 44089.0 72 36049.0 73 26433.0 74 16817.0 75 16817.0 76 13244.5 77 9672.0 78 8529.5 79 7387.0 80 5998.0 81 4609.0 82 4609.0 83 3798.0 84 2987.0 85 2628.5 86 2270.0 87 1455.5 88 641.0 89 641.0 90 488.5 91 336.0 92 239.5 93 143.0 94 147.5 95 152.0 96 152.0 97 80.0 98 8.0 99 6.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4314374.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.94965210313295 #Duplication Level Percentage of deduplicated Percentage of total 1 81.30709091397131 35.73418359186841 2 9.41682708756933 8.277325488280614 3 3.137840702671397 4.1372102171237435 4 1.5709611785375346 2.761727890570095 5 0.9763146746847908 2.145434514778999 6 0.6553203020264439 1.728065957410933 7 0.43486975003335027 1.3378661956899491 8 0.35034484147212747 1.2318027119061812 9 0.266058411193076 1.0523857149943185 >10 1.6469856431091583 13.45944737190911 >50 0.12277947179310908 3.7304596839034727 >100 0.0891885610391327 8.046727933491587 >500 0.014752259755928268 4.535604831573132 >1k 0.010188611002448516 8.045010264881212 >5k 2.6532841152209673E-4 0.7648976279451548 >10k+ 2.1226272921767738E-4 3.0118500036730564 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 48492 1.1239637546489942 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 32719 0.7583718982174471 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 30064 0.6968334224153956 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17866 0.4141041087304902 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 8930 0.2069825193643388 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 6225 0.14428512688051615 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 6074 0.1407851985015671 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5986 0.13874550514164974 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 5582 0.12938145835293832 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4784 0.11088514811186977 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4635 0.10743157640019155 No Hit GTACATGGGAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAA 4584 0.1062494813847849 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.635666727084856E-5 2 0.0 0.0 0.0 0.0 4.635666727084856E-5 3 0.0 0.0 0.0 0.0 4.635666727084856E-5 4 0.0 0.0 0.0 0.0 4.635666727084856E-5 5 0.0 0.0 0.0 0.0 4.635666727084856E-5 6 0.0 0.0 0.0 0.0 6.953500090627285E-5 7 0.0 0.0 0.0 0.0 6.953500090627285E-5 8 0.0 0.0 0.0 0.0 1.1589166817712141E-4 9 0.0 0.0 0.0 0.0 1.1589166817712141E-4 10 0.0 0.0 0.0 0.0 1.1589166817712141E-4 11 0.0 0.0 0.0 4.635666727084856E-5 1.1589166817712141E-4 12 0.0 0.0 0.0 1.8542666908339425E-4 1.1589166817712141E-4 13 0.0 0.0 0.0 3.4767500453136425E-4 1.1589166817712141E-4 14 0.0 0.0 0.0 6.026366745210313E-4 1.1589166817712141E-4 15 0.0 0.0 0.0 0.0011357383481357898 1.8542666908339425E-4 16 0.0 0.0 0.0 0.0029436483716988836 2.0860500271881852E-4 17 0.0 0.0 0.0 0.004311170056188917 2.0860500271881852E-4 18 0.0 0.0 0.0 0.004890628397074524 2.0860500271881852E-4 19 0.0 0.0 0.0 0.006629003419731345 2.0860500271881852E-4 20 0.0 0.0 0.0 0.00834420010875274 2.0860500271881852E-4 21 0.0 0.0 0.0 0.011936841822243504 2.549616699896671E-4 22 0.0 0.0 0.0 0.019006233581047912 2.781400036250914E-4 23 0.0 0.0 0.0 0.029204700380634593 3.708533381667885E-4 24 0.0 0.0 0.0 0.0428567388918995 3.708533381667885E-4 25 0.0 0.0 0.0 0.04807186395986996 4.1721000543763705E-4 26 0.0 0.0 0.0 0.05884978910034225 4.1721000543763705E-4 27 0.0 0.0 0.0 0.10140520965498123 4.1721000543763705E-4 28 0.0 0.0 0.0 0.18062875402086143 4.1721000543763705E-4 29 0.0 0.0 0.0 0.281779002005853 4.1721000543763705E-4 30 0.0 0.0 0.0 0.4437723757838333 4.1721000543763705E-4 31 0.0 0.0 0.0 0.8848792431995928 4.1721000543763705E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1485 0.0 18.686869 5 GTACTAG 100 2.8794784E-7 18.499998 1 CAAGACG 1565 0.0 17.84984 4 GACGGAC 1730 0.0 16.040462 7 CTTATAC 4385 0.0 15.989738 37 ACGGACC 1715 0.0 15.965014 8 AGACGGA 1820 0.0 15.552198 6 GCGCAAG 1740 0.0 15.310346 1 CGCAAGA 1750 0.0 15.117143 2 CGGACCA 1790 0.0 14.9860325 9 ACCGTCG 1185 0.0 14.675106 8 ATACCGT 1290 0.0 14.627906 6 TCTAGCG 805 0.0 14.478261 28 AGAGCGA 1880 0.0 14.268618 15 GCGAAAG 1920 0.0 14.260416 18 CCGTCGT 1195 0.0 14.242678 9 TACCGTC 1225 0.0 14.195918 7 CTAGCGG 835 0.0 14.179641 29 TATACCG 210 1.364242E-10 14.095239 5 AGCGAAA 1970 0.0 13.992385 17 >>END_MODULE