SRR2727211.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727211.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4701940
Sequences flagged as poor quality	0
Sequence length	43
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	37257	0.7923750622083651	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	26046	0.5539415645456982	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	24379	0.5184881134170152	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14846	0.3157420128712829	No Hit
GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA	6505	0.13834715032518494	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT	6043	0.12852141881861529	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5427	0.11542044347652244	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG	4930	0.10485033837097028	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	4885	0.10389328660084987	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGACGG	1325	16.056604	5
CTTATAC	4870	16.030802	37
TCGTTAC	1370	15.664234	23
GGAGTGT	2565	15.506824	6
CAAGACG	1395	15.2508955	4
CGTTACG	1040	14.586538	24
TACGGAT	2485	14.293762	27
CACTCTA	1265	14.18577	9
AGTGTAC	3225	14.111629	27
ACAGCTA	3540	14.110169	19
CGAGCCG	1280	14.019531	15
ATCTCGT	1920	13.971354	20
TGGAGTG	2935	13.930153	5
ACGGATG	2650	13.892452	28
TACTTAC	3305	13.881996	31
CGGATGG	2780	13.77518	29
CTACAGT	3470	13.648416	23
ACTCTAA	1290	13.624031	10
CAGCTAC	3675	13.541497	20
GATCTCG	1965	13.463103	19