##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727209.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1150586 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.290874389224275 31.0 31.0 34.0 30.0 34.0 2 31.524331079988805 31.0 31.0 34.0 30.0 34.0 3 31.671875896282415 31.0 31.0 34.0 30.0 34.0 4 35.472434915773356 37.0 35.0 37.0 33.0 37.0 5 35.31854289900972 37.0 35.0 37.0 33.0 37.0 6 35.337930411112254 37.0 35.0 37.0 33.0 37.0 7 35.243028335126624 37.0 35.0 37.0 32.0 37.0 8 35.26422970555873 37.0 35.0 37.0 32.0 37.0 9 36.82859777539445 39.0 37.0 39.0 33.0 39.0 10 36.55512669196392 39.0 35.0 39.0 32.0 39.0 11 36.733674840472595 39.0 35.0 39.0 32.0 39.0 12 36.60170730393035 39.0 35.0 39.0 32.0 39.0 13 36.667172206162775 39.0 35.0 39.0 32.0 39.0 14 37.668612341884916 39.0 37.0 41.0 32.0 41.0 15 37.671433513009895 39.0 36.0 41.0 32.0 41.0 16 37.611486668532386 39.0 36.0 41.0 32.0 41.0 17 37.63160337428059 39.0 36.0 41.0 32.0 41.0 18 37.58506448018662 39.0 36.0 41.0 32.0 41.0 19 37.61764005471994 39.0 36.0 41.0 32.0 41.0 20 37.552748773233816 39.0 36.0 41.0 32.0 41.0 21 37.462313986090564 39.0 36.0 41.0 32.0 41.0 22 37.38208964823142 39.0 36.0 41.0 32.0 41.0 23 37.269281044615525 39.0 36.0 41.0 31.0 41.0 24 37.13159989779121 39.0 36.0 41.0 31.0 41.0 25 37.008215813507206 39.0 36.0 40.0 31.0 41.0 26 36.78014941951319 39.0 35.0 40.0 30.0 41.0 27 36.61267736614212 39.0 35.0 40.0 30.0 41.0 28 36.38216091626354 38.0 35.0 40.0 30.0 41.0 29 36.29257873813865 38.0 35.0 40.0 30.0 41.0 30 36.18369856751256 38.0 35.0 40.0 30.0 41.0 31 36.25724022367733 38.0 35.0 40.0 30.0 41.0 32 36.20488603198718 38.0 35.0 40.0 30.0 41.0 33 36.14311055410026 38.0 35.0 40.0 30.0 41.0 34 36.164780381475175 38.0 35.0 40.0 30.0 41.0 35 35.939712459564085 38.0 35.0 40.0 29.0 41.0 36 35.872322451342185 38.0 35.0 40.0 28.0 41.0 37 35.77764547804336 38.0 35.0 40.0 28.0 41.0 38 35.66952057473322 38.0 34.0 40.0 27.0 41.0 39 35.56449930730949 38.0 34.0 40.0 27.0 41.0 40 35.336910930604056 38.0 34.0 40.0 26.0 41.0 41 35.22636204507964 38.0 34.0 40.0 26.0 41.0 42 34.986063623231985 38.0 33.0 40.0 25.0 41.0 43 34.610935644967 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 3.0 15 2.0 16 24.0 17 40.0 18 68.0 19 168.0 20 352.0 21 717.0 22 1276.0 23 2277.0 24 3772.0 25 5973.0 26 8690.0 27 12732.0 28 18111.0 29 24565.0 30 32032.0 31 40514.0 32 50160.0 33 62788.0 34 78159.0 35 97260.0 36 122367.0 37 160761.0 38 206949.0 39 220825.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.88692892143656 19.471903882021856 13.474351330539394 24.166815866002196 2 17.407825229926317 23.496114154005003 35.00668355081672 24.08937706525197 3 20.0233620085765 25.378633148673806 30.690274347158752 23.907730495590943 4 14.250564494961699 16.080327763417944 34.33763317127099 35.33147457034937 5 13.506595769460084 39.275551762319374 33.00196595473959 14.215886513480957 6 33.00387802389391 35.28601947181697 16.5387028870506 15.17139961723852 7 27.200921964981323 33.08288124486131 21.628457151399374 18.087739638757988 8 28.362243239531853 33.423490291034305 20.493991757243702 17.720274712190136 9 28.477923423368612 13.598548913336334 19.996419215947352 37.9271084473477 10 17.15751799517811 27.95949194584325 31.866023052601022 23.01696700637762 11 35.20831993436388 23.386430914334085 20.72674272066582 20.678506430636215 12 21.117326301554165 26.984597413839555 29.61551765795864 22.28255862664764 13 29.904500836964814 20.062211777303045 25.791031700368332 24.242255685363805 14 22.581623624831174 21.74891750812195 26.53899838864718 29.1304604783997 15 25.536552678374324 28.150003563401604 23.628481486824974 22.684962271399094 16 23.049993655406897 26.952874448324593 26.351181050351734 23.645950845916776 17 22.821762128167734 27.20639743574144 26.413931683507357 23.55790875258347 18 22.552334201876263 25.48953315962475 28.760214360334647 23.197918278164344 19 23.004625469108785 26.69274613110189 28.968890634859108 21.33373776493022 20 22.78977842594991 25.131194017657087 28.74213661560283 23.336890940790173 21 23.73268925573577 26.39611467547841 28.632018814760478 21.23917725402534 22 24.164643060145004 25.483188566521754 27.37040082184209 22.981767551491153 23 22.155579852353497 26.375255739249393 28.24612849452366 23.223035913873453 24 21.821663048220646 26.977122961690824 28.43142537802476 22.769788612063767 25 22.893290896986404 25.758005051339055 27.49529370251333 23.853410349161212 26 22.081965189911923 26.942705716912947 28.524421468712465 22.450907624462666 27 23.691058295512025 26.631125356992 27.352670726047425 22.32514562144855 28 21.96776251405805 27.69249756211183 27.98556561612952 22.354174307700596 29 22.111602261803988 27.36353475533337 28.696942253773294 21.82792072908935 30 22.75466588329773 27.591940107041108 28.028760996570444 21.624633013090722 31 22.425007778644968 27.33346312226987 27.78905705440532 22.45247204467984 32 21.766213042745175 27.536837750502784 27.60115280387559 23.09579640287645 33 21.280895126483372 26.857184078373976 28.391011189081045 23.470909606061607 34 22.376250015209642 27.215783957044497 28.765168357689035 21.642797670056822 35 22.163401953439376 26.841887525139363 28.870071424474137 22.12463909694712 36 21.221707894933537 27.33737417281281 28.689120152687416 22.75179777956624 37 21.493134802613625 26.986335658525306 29.0416361749578 22.478893363903264 38 21.61064014337042 26.10721840870652 28.946988751818637 23.33515269610442 39 21.348860493696257 26.07897193256306 29.464464194766844 23.107703378973845 40 21.815579191820518 26.02456487389904 29.688176285823047 22.471679648457396 41 20.456967145437194 26.563594550950558 30.38338724788934 22.59605105572291 42 21.020332248089236 26.54273561472154 30.04573321768212 22.3911989195071 43 20.057779253354376 25.564190768877772 29.90754276516488 24.470487212602972 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1742.0 1 1474.5 2 1207.0 3 1808.0 4 2409.0 5 2409.0 6 3320.5 7 4232.0 8 3948.0 9 3664.0 10 4787.5 11 5911.0 12 5911.0 13 9873.0 14 13835.0 15 19964.0 16 26093.0 17 22972.5 18 19852.0 19 19852.0 20 20091.5 21 20331.0 22 16470.0 23 12609.0 24 14255.5 25 15902.0 26 15902.0 27 17591.5 28 19281.0 29 21125.0 30 22969.0 31 24748.5 32 26528.0 33 26528.0 34 29324.0 35 32120.0 36 36805.5 37 41491.0 38 46082.0 39 50673.0 40 50673.0 41 56294.0 42 61915.0 43 65440.0 44 68965.0 45 76700.0 46 84435.0 47 84435.0 48 93853.5 49 103272.0 50 102377.5 51 101483.0 52 95819.0 53 90155.0 54 90155.0 55 84635.0 56 79115.0 57 74051.0 58 68987.0 59 62766.5 60 56546.0 61 56546.0 62 47365.0 63 38184.0 64 34024.0 65 29864.0 66 24617.0 67 19370.0 68 19370.0 69 15527.0 70 11684.0 71 9563.5 72 7443.0 73 5315.5 74 3188.0 75 3188.0 76 2495.0 77 1802.0 78 1593.0 79 1384.0 80 1077.5 81 771.0 82 771.0 83 655.5 84 540.0 85 466.5 86 393.0 87 265.5 88 138.0 89 138.0 90 93.0 91 48.0 92 39.0 93 30.0 94 26.5 95 23.0 96 23.0 97 12.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1150586.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.312769551647705 #Duplication Level Percentage of deduplicated Percentage of total 1 85.43784656588308 48.96679611219492 2 7.686481286334579 8.810670612534926 3 2.49893319645966 4.296623472409646 4 1.243735809786109 2.8512777539761287 5 0.7583293502234945 2.173097764680494 6 0.4844765970558102 1.6660017336135682 7 0.3289298079632002 1.3196314797723838 8 0.23443168990752453 1.0748743535418632 9 0.17739678482541532 0.9150390943112036 >10 0.9859068200139123 10.234956109761303 >50 0.08430183213396192 3.3878809030744064 >100 0.07113930985516284 8.05271355049789 >500 0.006564355301812822 2.6513108276712645 >1k 0.001068615979364878 1.1373259891396486 >5k 3.05318851247108E-4 1.398931090111073 >10k+ 1.52659425623554E-4 1.06286915270932 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12148 1.0558098221254213 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8361 0.7266731908783872 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7628 0.6629665231455971 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4773 0.4148320942545799 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 1667 0.14488269455738206 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1661 0.14436122115165664 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 1392 0.12098183012829984 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1212 0.10533762795653694 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1207 0.10490306678509907 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 8.691223428757172E-5 0.0 13 0.0 0.0 0.0 8.691223428757172E-5 0.0 14 0.0 8.691223428757172E-5 0.0 2.6073670286271515E-4 0.0 15 0.0 8.691223428757172E-5 0.0 8.691223428757172E-4 8.691223428757172E-5 16 0.0 8.691223428757172E-5 0.0 0.0019989813886141495 8.691223428757172E-5 17 0.0 8.691223428757172E-5 0.0 0.0029550159657774386 8.691223428757172E-5 18 0.0 8.691223428757172E-5 0.0 0.003737226074365584 8.691223428757172E-5 19 0.0 8.691223428757172E-5 0.0 0.004606348417241301 8.691223428757172E-5 20 0.0 8.691223428757172E-5 0.0 0.00556238299440459 8.691223428757172E-5 21 0.0 8.691223428757172E-5 0.0 0.00756136438301874 8.691223428757172E-5 22 0.0 8.691223428757172E-5 0.0 0.011820063863109754 8.691223428757172E-5 23 0.0 8.691223428757172E-5 0.0 0.017817008028952204 1.7382446857514344E-4 24 0.0 8.691223428757172E-5 0.0 0.027464266034872665 1.7382446857514344E-4 25 0.0 8.691223428757172E-5 0.0 0.031549141046388535 1.7382446857514344E-4 26 0.0 8.691223428757172E-5 0.0 0.03911050542940728 1.7382446857514344E-4 27 0.0 8.691223428757172E-5 0.0 0.07248480339583482 1.7382446857514344E-4 28 0.0 8.691223428757172E-5 0.0 0.14644711477455835 1.7382446857514344E-4 29 0.0 8.691223428757172E-5 0.0 0.2519585671996704 1.7382446857514344E-4 30 0.0 8.691223428757172E-5 0.0 0.41213781499166513 1.7382446857514344E-4 31 0.0 8.691223428757172E-5 0.0 0.8785088641787749 1.7382446857514344E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGGACCG 60 3.72629E-5 21.583334 7 CTATACT 120 5.173206E-9 18.5 4 GACCGTG 120 5.173206E-9 18.5 7 TCTATAC 95 3.6063939E-6 17.526316 3 TTAGTAC 85 2.723119E-5 17.411764 3 AGACCGT 110 7.807612E-7 16.818182 6 CTTATAC 1110 0.0 16.5 37 TGTGCGA 90 4.445963E-5 16.444445 10 AGGTCCG 290 0.0 15.9482765 29 CTAGACA 70 0.0025924956 15.857143 4 CGTGCGC 70 0.0025924956 15.857143 10 ACCGACT 70 0.0025924956 15.857143 13 ATACAGT 130 2.5887675E-7 15.653846 6 GTATTAG 170 1.4861143E-9 15.235294 1 TATACTC 85 5.364156E-4 15.235294 5 AGGCGTG 110 1.4517918E-5 15.136364 7 TCGTTAC 295 0.0 15.050847 23 ATCGCTC 295 0.0 15.050847 16 GGTCCGA 160 1.096123E-8 15.031251 30 TACCGTC 260 0.0 14.942307 7 >>END_MODULE