##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727208.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4968276 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.286812769660944 31.0 31.0 34.0 30.0 34.0 2 31.521560798957225 31.0 31.0 34.0 30.0 34.0 3 31.67673051980204 31.0 31.0 34.0 30.0 34.0 4 35.48116811545896 37.0 35.0 37.0 33.0 37.0 5 35.32035217045108 37.0 35.0 37.0 33.0 37.0 6 35.3390761704865 37.0 35.0 37.0 33.0 37.0 7 35.24223956157025 37.0 35.0 37.0 32.0 37.0 8 35.258640019193784 37.0 35.0 37.0 32.0 37.0 9 36.836619382659094 39.0 37.0 39.0 33.0 39.0 10 36.56372290911374 39.0 35.0 39.0 32.0 39.0 11 36.73236591525914 39.0 35.0 39.0 32.0 39.0 12 36.598084929259166 39.0 35.0 39.0 32.0 39.0 13 36.65670164056908 39.0 35.0 39.0 32.0 39.0 14 37.680845025517904 39.0 37.0 41.0 32.0 41.0 15 37.67727457170254 39.0 37.0 41.0 32.0 41.0 16 37.624587080105854 39.0 36.0 41.0 32.0 41.0 17 37.62720569469168 39.0 36.0 41.0 32.0 41.0 18 37.566743473993796 39.0 36.0 41.0 32.0 41.0 19 37.58295412734719 39.0 36.0 41.0 32.0 41.0 20 37.52118843639121 39.0 36.0 41.0 32.0 41.0 21 37.42476585439295 39.0 36.0 41.0 32.0 41.0 22 37.35569622138544 39.0 36.0 41.0 31.0 41.0 23 37.24428554291267 39.0 36.0 41.0 31.0 41.0 24 37.10311886859748 39.0 36.0 40.0 31.0 41.0 25 36.98601084158771 39.0 36.0 40.0 31.0 41.0 26 36.760690026077455 39.0 35.0 40.0 30.0 41.0 27 36.5998032315435 39.0 35.0 40.0 30.0 41.0 28 36.36937098502579 38.0 35.0 40.0 30.0 41.0 29 36.296047562575026 38.0 35.0 40.0 30.0 41.0 30 36.19159603854536 38.0 35.0 40.0 30.0 41.0 31 36.30200475979998 38.0 35.0 40.0 30.0 41.0 32 36.25082422957179 38.0 35.0 40.0 30.0 41.0 33 36.21188074092502 38.0 35.0 40.0 30.0 41.0 34 36.23855256833558 38.0 35.0 40.0 30.0 41.0 35 36.02410554486104 38.0 35.0 40.0 29.0 41.0 36 35.97407148878202 38.0 35.0 40.0 29.0 41.0 37 35.879527023055886 38.0 35.0 40.0 28.0 41.0 38 35.76760570467502 38.0 34.0 40.0 28.0 41.0 39 35.67874751724743 38.0 34.0 40.0 27.0 41.0 40 35.45895819797451 38.0 34.0 40.0 26.0 41.0 41 35.3699856851753 38.0 34.0 40.0 26.0 41.0 42 35.1358503432579 38.0 34.0 40.0 25.0 41.0 43 34.75378763176603 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 6.0 14 12.0 15 31.0 16 95.0 17 213.0 18 361.0 19 730.0 20 1500.0 21 2964.0 22 5571.0 23 9822.0 24 16002.0 25 24919.0 26 37966.0 27 54841.0 28 77062.0 29 104106.0 30 135619.0 31 172492.0 32 215872.0 33 269297.0 34 336661.0 35 415602.0 36 525970.0 37 690816.0 38 910772.0 39 958972.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.99692690180658 19.263563457424667 12.894211191165708 24.845298449603042 2 17.69034167989057 23.23184138723372 34.300368981111355 24.77744795176435 3 20.106411157512184 25.153010823070215 30.019829816217943 24.720748203199662 4 14.491062895861665 15.918902251002159 34.2101364738996 35.37989837923658 5 14.004274319703654 38.39102336504654 33.129761712111 14.474940603138794 6 33.764227269177475 35.01546612949844 16.25350524004705 14.96680136127703 7 27.959457163812964 32.05027256939832 21.601295902240537 18.388974364548186 8 28.262298632362615 33.14719230574147 20.42410687328965 18.16640218860627 9 28.25581751094343 13.417471171086309 19.612879799753475 38.71383151821678 10 17.273355989079512 27.138709685210728 31.998202193275898 23.589732132433866 11 35.78110394833137 22.788005336257484 20.69800470022197 20.732886015189173 12 21.540953038840836 26.403263425783912 29.27095837670854 22.784825158666706 13 30.08256787666386 19.54106414377945 25.360285942246364 25.016082037310326 14 22.92310250074674 21.264861291925005 25.63678024328761 30.17525596404064 15 25.742068274789887 27.63614581798596 22.89806363414593 23.723722273078227 16 23.92149711489458 26.193572981855272 25.656525523139212 24.228404380110927 17 23.611007117962046 26.658019804052753 25.90121804827268 23.829755029712523 18 23.552012810882488 24.610267223479532 27.95917537592517 23.87854458971281 19 23.669296955322128 26.27893458414951 27.8356516425416 22.216116817986762 20 23.461659537433103 24.940804415857734 27.60353893382735 23.99399711288181 21 24.364709206976425 26.008699999758466 27.350594049122872 22.275996744142233 22 24.537002372654015 25.322486109869903 26.33406437162509 23.806447145850996 23 22.67993968128985 25.71195722620885 27.27169344054155 24.33640965195975 24 22.73239248383141 26.80241596883909 27.08355977002888 23.38163177730062 25 23.612798483820143 25.391705291735 26.37077730786293 24.624718916581926 26 22.990610827578823 26.52779354448102 27.388091965905275 23.093503662034877 27 24.341340939996087 25.996321460401962 26.270179031921735 23.39215856768022 28 22.71854462191714 26.806340871561886 27.38076548082272 23.09434902569825 29 22.903035177594806 26.65711405727057 27.660842513580164 22.779008251554465 30 23.079212990582647 27.190478145739082 27.353532694238403 22.376776169439864 31 23.369957707663584 26.71455853096728 26.46225773286347 23.453226028505664 32 22.376816424852404 26.9315553322722 26.665728715554447 24.025899527320945 33 22.143677203118344 26.39557464198849 27.33668580408979 24.124062350803378 34 23.148915237398242 26.5812728600424 27.549375276252768 22.72043662630659 35 23.14476892990647 26.475562146708437 27.842032125429423 22.537636797955667 36 22.209213014735894 26.903497309730778 27.38223480338049 23.505054872152837 37 22.549572527774224 26.564748013194112 27.762326408597264 23.123353050434396 38 22.339439274307626 25.840955695698064 27.979242699077105 23.840362330917202 39 22.41439485245989 25.44423860510165 28.111119430563036 24.03024711187543 40 22.512960230067733 25.769582849261997 28.602577634575855 23.11487928609441 41 21.27029577261811 26.12169694276244 29.167240306295383 23.44076697832407 42 22.260055600775804 26.15255271647549 28.823459083191032 22.763932599557673 43 21.32667347788247 25.059557882855138 28.897368020617215 24.716400618645178 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2225.0 1 2148.0 2 2071.0 3 4025.5 4 5980.0 5 5980.0 6 9021.0 7 12062.0 8 11469.0 9 10876.0 10 14484.0 11 18092.0 12 18092.0 13 30965.5 14 43839.0 15 66059.5 16 88280.0 17 79171.5 18 70063.0 19 70063.0 20 72554.5 21 75046.0 22 60731.5 23 46417.0 24 52740.0 25 59063.0 26 59063.0 27 66401.5 28 73740.0 29 81146.0 30 88552.0 31 96573.5 32 104595.0 33 104595.0 34 118122.5 35 131650.0 36 154072.5 37 176495.0 38 199945.0 39 223395.0 40 223395.0 41 246395.5 42 269396.0 43 285302.5 44 301209.0 45 332577.5 46 363946.0 47 363946.0 48 413462.0 49 462978.0 50 460146.0 51 457314.0 52 420601.5 53 383889.0 54 383889.0 55 366601.5 56 349314.0 57 332729.0 58 316144.0 59 292552.0 60 268960.0 61 268960.0 62 226186.5 63 183413.0 64 161224.0 65 139035.0 66 116822.5 67 94610.0 68 94610.0 69 77152.5 70 59695.0 71 49657.5 72 39620.0 73 28795.0 74 17970.0 75 17970.0 76 13811.0 77 9652.0 78 8662.0 79 7672.0 80 6064.5 81 4457.0 82 4457.0 83 3724.5 84 2992.0 85 2618.5 86 2245.0 87 1466.5 88 688.0 89 688.0 90 501.0 91 314.0 92 234.5 93 155.0 94 154.5 95 154.0 96 154.0 97 79.5 98 5.0 99 6.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4968276.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.29872203839911 #Duplication Level Percentage of deduplicated Percentage of total 1 81.1200592363085 35.935149558477015 2 9.429259825203665 8.354083200490821 3 3.217952582964925 4.27653561016535 4 1.5935273850748592 2.823649067680327 5 0.9527236668708351 2.110222044905774 6 0.6298552720661598 1.6741070173007437 7 0.4573061973501714 1.4180656085996775 8 0.3478313144177869 1.2326786170915638 9 0.2749014950901826 1.0960006427046303 >10 1.7270304417366804 14.306171512195931 >50 0.13813328706703193 4.170709354494538 >100 0.08831205756075194 7.705400600903893 >500 0.01287794747330183 4.039196885485455 >1k 0.00986395900032734 8.054603214281206 >5k 1.826659074134652E-4 0.5749068679937481 >10k+ 1.826659074134652E-4 2.228520197229293 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 40741 0.8200228811764887 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 28130 0.5661923773961028 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 26447 0.5323174477424362 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14843 0.29875554417669226 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 7419 0.1493274528226693 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 7221 0.14534216698106145 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 7077 0.14244377727807395 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 6702 0.13489588742654393 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 2.0127706270746635E-5 7 0.0 0.0 0.0 0.0 2.0127706270746635E-5 8 0.0 0.0 0.0 0.0 2.0127706270746635E-5 9 0.0 0.0 0.0 2.0127706270746635E-5 8.051082508298654E-5 10 0.0 2.0127706270746635E-5 0.0 8.051082508298654E-5 8.051082508298654E-5 11 0.0 2.0127706270746635E-5 0.0 2.0127706270746634E-4 1.0063853135373317E-4 12 0.0 2.0127706270746635E-5 0.0 2.616601815197062E-4 1.207662376244798E-4 13 0.0 4.025541254149327E-5 0.0 3.2204330033194615E-4 1.207662376244798E-4 14 0.0 4.025541254149327E-5 0.0 4.025541254149327E-4 2.0127706270746634E-4 15 0.0 6.03831188122399E-5 0.0 6.03831188122399E-4 2.2140476897821297E-4 16 0.0 6.03831188122399E-5 0.0 0.0015095779703059975 2.415324752489596E-4 17 0.0 6.03831188122399E-5 0.0 0.002294558514865116 2.415324752489596E-4 18 0.0 6.03831188122399E-5 0.0 0.002797751171633782 2.616601815197062E-4 19 2.0127706270746635E-5 6.03831188122399E-5 0.0 0.0036028594224636473 2.616601815197062E-4 20 2.0127706270746635E-5 6.03831188122399E-5 0.0 0.004790394092437699 2.817878877904529E-4 21 2.0127706270746635E-5 6.03831188122399E-5 0.0 0.007245974257468788 2.817878877904529E-4 22 2.0127706270746635E-5 6.03831188122399E-5 0.0 0.010828705973661689 2.817878877904529E-4 23 2.0127706270746635E-5 6.03831188122399E-5 0.0 0.016102165016597305 3.2204330033194615E-4 24 2.0127706270746635E-5 6.03831188122399E-5 0.0 0.023187117623900123 3.2204330033194615E-4 25 2.0127706270746635E-5 6.03831188122399E-5 0.0 0.026145890445699878 3.2204330033194615E-4 26 2.0127706270746635E-5 6.03831188122399E-5 0.0 0.03292892745894149 3.2204330033194615E-4 27 2.0127706270746635E-5 6.03831188122399E-5 0.0 0.06199333531389963 3.2204330033194615E-4 28 2.0127706270746635E-5 6.03831188122399E-5 0.0 0.12052470514923085 3.2204330033194615E-4 29 2.0127706270746635E-5 6.03831188122399E-5 0.0 0.19692947815298506 3.421710066026928E-4 30 2.0127706270746635E-5 6.03831188122399E-5 0.0 0.31924554916031234 3.421710066026928E-4 31 2.0127706270746635E-5 6.03831188122399E-5 0.0 0.6883675544595349 3.421710066026928E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1590 0.0 19.430819 5 CAAGACG 1710 0.0 18.391813 4 CTTATAC 3940 0.0 16.668783 37 ACGGACC 1865 0.0 15.772118 8 AGACGGA 1925 0.0 15.568831 6 GACGGAC 1895 0.0 15.522428 7 CGGACCA 1945 0.0 15.218509 9 GTACCGT 250 0.0 14.799999 6 CGAGCCG 1495 0.0 14.725752 15 CGAACGA 1085 0.0 14.32258 16 CTAGCGG 1060 0.0 14.311321 29 GCGCAAG 2180 0.0 14.256881 1 CGCAAGA 2135 0.0 14.2107725 2 TACCGTC 1285 0.0 13.96498 7 GCAAGAC 2400 0.0 13.952084 3 TCTAGCG 1050 0.0 13.919047 28 AGAGCGA 2130 0.0 13.809859 15 TCTTATA 6335 0.0 13.754538 37 ACGAACG 1130 0.0 13.752213 15 TATACTG 740 0.0 13.750001 5 >>END_MODULE