##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727205.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5455963 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.14105539205453 31.0 31.0 33.0 26.0 34.0 2 30.458645155768103 31.0 31.0 34.0 26.0 34.0 3 31.26385681134568 31.0 31.0 34.0 28.0 34.0 4 35.236479059700365 35.0 35.0 37.0 33.0 37.0 5 35.08358561082618 35.0 35.0 37.0 32.0 37.0 6 35.11646486605573 36.0 35.0 37.0 32.0 37.0 7 35.00711973303338 36.0 35.0 37.0 32.0 37.0 8 34.9966255269693 36.0 35.0 37.0 32.0 37.0 9 36.442854359532866 38.0 35.0 39.0 32.0 39.0 10 36.24503758548216 38.0 35.0 39.0 32.0 39.0 11 36.299007709546416 38.0 35.0 39.0 32.0 39.0 12 36.09483513726175 38.0 35.0 39.0 30.0 39.0 13 36.107664586435064 38.0 35.0 39.0 31.0 39.0 14 36.99409196873219 39.0 36.0 40.0 31.0 41.0 15 36.943947933664504 38.0 36.0 40.0 31.0 41.0 16 36.77950638594873 38.0 36.0 40.0 31.0 41.0 17 37.262927369558774 39.0 36.0 40.0 32.0 41.0 18 37.41002954015634 39.0 36.0 41.0 32.0 41.0 19 37.53004758280069 39.0 36.0 41.0 32.0 41.0 20 37.534247208054744 39.0 36.0 41.0 32.0 41.0 21 37.4758536668962 39.0 36.0 41.0 32.0 41.0 22 37.423018814460434 39.0 36.0 41.0 32.0 41.0 23 37.30602810173016 39.0 36.0 41.0 31.0 41.0 24 37.21101187819639 39.0 36.0 41.0 31.0 41.0 25 37.09788464474558 39.0 36.0 41.0 31.0 41.0 26 36.83146641573632 39.0 36.0 40.0 30.0 41.0 27 36.68212815959346 39.0 36.0 40.0 30.0 41.0 28 36.52338991301811 39.0 35.0 40.0 30.0 41.0 29 36.35139332873042 39.0 35.0 40.0 30.0 41.0 30 36.22801895833971 39.0 35.0 40.0 29.0 41.0 31 36.048443327053356 38.0 35.0 40.0 29.0 41.0 32 35.89322361606924 38.0 35.0 40.0 27.0 41.0 33 35.74569695578947 38.0 34.0 40.0 27.0 41.0 34 35.60935970423553 38.0 34.0 40.0 27.0 41.0 35 35.44133693721896 38.0 34.0 40.0 26.0 41.0 36 35.3055788684784 38.0 34.0 40.0 25.0 41.0 37 35.16414975688068 38.0 34.0 40.0 25.0 41.0 38 35.08225990535493 38.0 34.0 40.0 25.0 41.0 39 34.97072542464089 38.0 33.0 40.0 24.0 41.0 40 34.86239019582794 38.0 33.0 40.0 24.0 41.0 41 34.73437759750204 38.0 33.0 40.0 24.0 41.0 42 34.59716112444311 38.0 33.0 40.0 23.0 41.0 43 34.267653024773075 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 6.0 12 11.0 13 15.0 14 43.0 15 95.0 16 209.0 17 412.0 18 906.0 19 1965.0 20 3889.0 21 7508.0 22 12765.0 23 20433.0 24 30768.0 25 43063.0 26 58376.0 27 77374.0 28 100395.0 29 129311.0 30 163762.0 31 204586.0 32 253526.0 33 310937.0 34 381165.0 35 467662.0 36 583900.0 37 744906.0 38 918349.0 39 939624.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.35377714255027 28.07264272136743 13.815086355974188 22.758493780108115 2 20.383184416756492 24.85247792186274 30.650244512288666 24.114093149092103 3 19.546136951441937 25.102039731574425 30.45055474166522 24.901268575318415 4 16.02404561761141 17.2653846809445 32.50590225776824 34.204667443675845 5 13.611492599931488 39.154792655302096 33.37091912096911 13.862795623797302 6 34.742317717330565 37.82773086987577 12.827396373472475 14.602555039321196 7 28.82680839294548 31.68914451949179 20.017547772959603 19.466499314603123 8 27.897384934611907 35.92874438481346 17.946767600879994 18.22710307969464 9 26.658043685413556 14.808238252348852 18.33505835725059 40.198659704987 10 16.571556661949504 29.221917377372243 32.866608516223444 21.33991744445481 11 35.97857976676161 23.59290193133641 19.680155455599678 20.748362846302292 12 20.98901697097286 26.815467773516794 29.005017079477994 23.19049817603235 13 31.167201830364316 20.80149737085827 23.42770652953475 24.603594269242663 14 22.039244034462843 22.165179639231425 24.808104453787536 30.987471872518196 15 24.962009456442427 29.46755687309463 21.666385934068835 23.90404773639411 16 24.006962657188108 27.309441064757955 24.08920295097309 24.594393327080848 17 23.73729440613875 27.595641685986504 25.206420937971902 23.46064296990284 18 23.582051417870687 26.605385703678706 25.93903221117885 23.87353066727175 19 24.083722708530097 26.973808290122204 26.366161207471535 22.57630779387617 20 23.946001833223576 26.6453236578034 26.098619070547212 23.31005543842581 21 23.500837524008137 27.039809470848684 26.04552120313133 23.413831802011853 22 24.091109122257613 26.574776991706138 25.539176127110835 23.794937758925418 23 23.815649043074522 26.569773292084275 25.464982075574927 24.149595589266276 24 23.817976771470043 26.684015269165133 25.55609339726094 23.941914562103886 25 24.277858922430376 26.181372564293415 25.507504358075746 24.033264155200467 26 24.035500240745765 26.489255883883377 25.817642091781046 23.657601783589808 27 24.21693475560593 26.900054124267335 25.523395228303418 23.359615891823314 28 23.929542777324553 26.933137193195776 25.729206741321377 23.408113288158297 29 23.905257422016977 27.02514661481392 25.723928113148858 23.345667850020245 30 23.786213359584732 27.03660197109108 25.65704716106029 23.520137508263893 31 23.872320981648887 26.420010546259203 25.905949142250417 23.801719329841497 32 23.442497685559818 26.75179432118583 25.687729187313035 24.117978805941316 33 23.566563776183965 26.75918073491334 25.68355027334313 23.99070521555956 34 23.95192196134761 26.546367708138785 25.8152593776754 23.686450952838207 35 23.699061009028107 26.884126596899577 25.83745527599802 23.5793571180743 36 23.749354605227342 26.87622698321085 25.80593013552328 23.56848827603853 37 23.484488439529375 26.605404032248753 26.18371862125898 23.726388906962896 38 23.574133475611912 26.794848132217908 26.07970398626237 23.55131440590781 39 23.285733425978144 26.89851452438369 26.130914010963785 23.684838038674382 40 23.755403033341686 26.671331898695062 26.386432605939593 23.18683246202366 41 23.68705579564964 26.430109588353147 26.213135976178727 23.66969863981849 42 23.237419315343598 26.716750095262743 26.24869340206303 23.797137187330634 43 23.616509129552384 26.204319933987826 26.19893133439505 23.980239602064753 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2547.0 1 2272.0 2 1997.0 3 1871.0 4 1745.0 5 1745.0 6 2120.5 7 2496.0 8 3330.0 9 4164.0 10 6321.0 11 8478.0 12 8478.0 13 21694.0 14 34910.0 15 50816.5 16 66723.0 17 53125.5 18 39528.0 19 39528.0 20 47799.0 21 56070.0 22 50362.0 23 44654.0 24 51462.0 25 58270.0 26 58270.0 27 71183.5 28 84097.0 29 96374.0 30 108651.0 31 125369.0 32 142087.0 33 142087.0 34 160298.5 35 178510.0 36 202808.5 37 227107.0 38 251859.5 39 276612.0 40 276612.0 41 301137.0 42 325662.0 43 347211.5 44 368761.0 45 390979.5 46 413198.0 47 413198.0 48 433299.0 49 453400.0 50 463760.0 51 474120.0 52 468850.0 53 463580.0 54 463580.0 55 437205.0 56 410830.0 57 374191.5 58 337553.0 59 306138.0 60 274723.0 61 274723.0 62 239355.5 63 203988.0 64 171865.5 65 139743.0 66 115770.5 67 91798.0 68 91798.0 69 75312.0 70 58826.0 71 48391.0 72 37956.0 73 31052.5 74 24149.0 75 24149.0 76 19741.0 77 15333.0 78 12652.0 79 9971.0 80 7912.5 81 5854.0 82 5854.0 83 4596.0 84 3338.0 85 2704.5 86 2071.0 87 1675.0 88 1279.0 89 1279.0 90 948.0 91 617.0 92 453.5 93 290.0 94 230.0 95 170.0 96 170.0 97 117.5 98 65.0 99 53.5 100 42.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5455963.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.52443779057281 #Duplication Level Percentage of deduplicated Percentage of total 1 81.53022107708183 46.89980130400242 2 9.544381443778152 10.980703532242275 3 3.250418430713876 5.60935478432795 4 1.6376846242989966 3.7682754916426093 5 0.9331367025362273 2.6839082097572726 6 0.6047214363538808 2.087175638769879 7 0.4222354992274692 1.700220179579741 8 0.3197807824463585 1.4716167781165 9 0.24047426611481051 1.2449832265219563 >10 1.4026002145628582 14.77949028066364 >50 0.08471009429965551 3.2898299113781033 >100 0.027248736615526705 2.5943158057038276 >500 0.0012256042490330402 0.4572615710942196 >1k 9.998255379533025E-4 1.0592297537523974 >5k 6.450487341471913E-5 0.24011335165809528 >10k+ 9.675731012207872E-5 1.1337201807889992 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 30941 0.5671042857145475 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16805 0.30801161958026474 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13361 0.244888024350605 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7685 0.14085506078395327 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4662856034764165E-4 2 0.0 0.0 0.0 0.0 1.4662856034764165E-4 3 0.0 0.0 0.0 0.0 1.4662856034764165E-4 4 0.0 0.0 0.0 0.0 1.4662856034764165E-4 5 0.0 0.0 0.0 0.0 1.4662856034764165E-4 6 0.0 0.0 0.0 0.0 1.4662856034764165E-4 7 0.0 0.0 0.0 1.8328570043455207E-5 1.8328570043455207E-4 8 0.0 0.0 0.0 1.8328570043455207E-5 1.8328570043455207E-4 9 0.0 0.0 0.0 1.8328570043455207E-5 2.932571206952833E-4 10 0.0 0.0 0.0 1.8328570043455207E-5 2.932571206952833E-4 11 0.0 0.0 0.0 1.8328570043455207E-5 3.115856907387385E-4 12 0.0 0.0 0.0 1.8328570043455207E-5 3.115856907387385E-4 13 0.0 0.0 0.0 1.8328570043455207E-5 3.2991426078219374E-4 14 0.0 0.0 0.0 7.331428017382083E-5 4.582142510863802E-4 15 0.0 0.0 0.0 7.331428017382083E-5 4.948713911732906E-4 16 1.8328570043455207E-5 0.0 0.0 7.331428017382083E-5 5.865142413905666E-4 17 1.8328570043455207E-5 0.0 0.0 1.0997142026073124E-4 6.048428114340218E-4 18 1.8328570043455207E-5 0.0 0.0 1.4662856034764165E-4 6.598285215643875E-4 19 1.8328570043455207E-5 0.0 0.0 2.382714105649177E-4 6.598285215643875E-4 20 1.8328570043455207E-5 0.0 0.0 3.6657140086910413E-4 6.781570916078426E-4 21 1.8328570043455207E-5 0.0 0.0 8.247856519554843E-4 6.781570916078426E-4 22 1.8328570043455207E-5 0.0 0.0 0.00133798561317223 6.964856616512978E-4 23 1.8328570043455207E-5 0.0 0.0 0.0017595427241716998 8.797713620858499E-4 24 1.8328570043455207E-5 0.0 0.0 0.0023643855356057218 8.797713620858499E-4 25 1.8328570043455207E-5 0.0 0.0 0.0027676140765617364 8.797713620858499E-4 26 1.8328570043455207E-5 0.0 0.0 0.0035007568782999443 8.980999321293051E-4 27 1.8328570043455207E-5 0.0 0.0 0.006909870906382613 8.980999321293051E-4 28 1.8328570043455207E-5 0.0 0.0 0.012701699040114459 9.164285021727604E-4 29 1.8328570043455207E-5 0.0 0.0 0.024358669587751968 9.164285021727604E-4 30 1.8328570043455207E-5 0.0 0.0 0.04045115408590564 9.164285021727604E-4 31 1.8328570043455207E-5 0.0 0.0 0.08064570819120291 9.164285021727604E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTATAC 560 0.0 13.214285 3 CGTATAC 185 7.400013E-8 13.0 3 TATACCG 315 0.0 12.333334 5 TTACACT 855 0.0 11.900585 4 GGGTAAG 1410 0.0 11.677305 1 CTACACT 1130 0.0 11.460177 4 GAGTACT 11540 0.0 11.414212 11 GTATAAG 780 0.0 11.384616 1 AAGTACG 910 0.0 11.384615 1 ATACGGG 520 0.0 11.384615 1 TACACAG 1895 0.0 11.2269125 5 GTACTTT 11780 0.0 11.197368 13 CTAGTAC 415 0.0 11.144578 3 TCGTATA 150 2.6582755E-4 11.1 2 AGTACTT 12060 0.0 10.983416 12 TCTACAC 915 0.0 10.918033 3 TATACGA 170 6.989132E-5 10.882353 5 CAAGACT 1975 0.0 10.865823 4 TAGACTG 750 0.0 10.8533325 5 TATACAG 1060 0.0 10.820755 5 >>END_MODULE