##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727204.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5199469 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.04639743019912 31.0 30.0 33.0 26.0 34.0 2 30.370393976769552 31.0 31.0 34.0 26.0 34.0 3 31.170370666696925 31.0 31.0 34.0 28.0 34.0 4 35.14459688095073 35.0 35.0 37.0 33.0 37.0 5 34.9959920907308 35.0 35.0 37.0 32.0 37.0 6 35.0641280869258 35.0 35.0 37.0 32.0 37.0 7 34.9207871034523 35.0 35.0 37.0 32.0 37.0 8 34.91820972487768 35.0 35.0 37.0 32.0 37.0 9 36.345912053711636 38.0 35.0 39.0 32.0 39.0 10 36.1333545790926 38.0 35.0 39.0 31.0 39.0 11 36.209794884823815 38.0 35.0 39.0 32.0 39.0 12 36.01198910888785 37.0 35.0 39.0 30.0 39.0 13 36.011051320817565 37.0 35.0 39.0 30.0 39.0 14 36.822379169872924 38.0 36.0 40.0 31.0 41.0 15 36.80432674952 38.0 36.0 40.0 31.0 41.0 16 36.568800390963 38.0 35.0 40.0 30.0 41.0 17 37.10058104010236 39.0 36.0 40.0 31.0 41.0 18 37.277957614517945 39.0 36.0 40.0 32.0 41.0 19 37.40713907516325 39.0 36.0 41.0 32.0 41.0 20 37.44694621700793 39.0 36.0 41.0 32.0 41.0 21 37.39678013274048 39.0 36.0 41.0 32.0 41.0 22 37.359769237974106 39.0 36.0 41.0 31.0 41.0 23 37.24177161167804 39.0 36.0 41.0 31.0 41.0 24 37.14018277635659 39.0 36.0 41.0 31.0 41.0 25 37.028981805642076 39.0 36.0 40.0 31.0 41.0 26 36.74755960656751 39.0 36.0 40.0 30.0 41.0 27 36.58864299412113 39.0 35.0 40.0 30.0 41.0 28 36.41232960519622 39.0 35.0 40.0 30.0 41.0 29 36.223956715579995 38.0 35.0 40.0 29.0 41.0 30 36.0808763356412 38.0 35.0 40.0 29.0 41.0 31 35.90834217878787 38.0 35.0 40.0 28.0 41.0 32 35.73192877965038 38.0 34.0 40.0 27.0 41.0 33 35.5926634046669 38.0 34.0 40.0 27.0 41.0 34 35.45091392986476 38.0 34.0 40.0 26.0 41.0 35 35.25852428392207 38.0 34.0 40.0 26.0 41.0 36 35.099839233583275 38.0 34.0 40.0 25.0 41.0 37 34.949139229409774 38.0 33.0 40.0 25.0 41.0 38 34.85613473221977 38.0 33.0 40.0 24.0 41.0 39 34.737168160825654 38.0 33.0 40.0 24.0 41.0 40 34.60382935257427 38.0 33.0 40.0 24.0 41.0 41 34.446341347549144 38.0 33.0 40.0 23.0 41.0 42 34.25708529082489 38.0 33.0 40.0 22.0 41.0 43 33.89935087602215 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 4.0 12 19.0 13 23.0 14 39.0 15 79.0 16 173.0 17 431.0 18 888.0 19 1918.0 20 3665.0 21 7310.0 22 12785.0 23 20414.0 24 30431.0 25 43299.0 26 59051.0 27 77316.0 28 100830.0 29 130343.0 30 164205.0 31 204567.0 32 251891.0 33 308539.0 34 375214.0 35 456450.0 36 569462.0 37 718720.0 38 859713.0 39 801687.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.16786637250842 27.919581788063358 14.118922528435116 21.793629310993104 2 20.095782857826443 26.013252507131018 29.984465721403474 23.906498913639066 3 20.921501791817587 25.36012812077541 29.834777358995694 23.883592728411305 4 16.399174608022474 17.03071986774034 31.504178599776246 35.06592692446094 5 14.087669337003453 39.37303982387432 32.32632024539429 14.212970593727936 6 35.27606376728085 36.47028186916779 12.149009831580878 16.10464453197048 7 28.77441908010222 31.091540309212345 20.02198686058134 20.112053750104096 8 28.964996233269204 35.47581493417886 17.787720246048202 17.771468586503737 9 26.970523336132977 15.034342930018429 18.175952198195624 39.81918153565297 10 17.14034644691602 29.580347531642175 32.167361705589556 21.111944315852256 11 35.267620597411 23.98298749353059 18.542951212902704 22.206440696155706 12 21.579376663270807 26.99600670760803 28.35591480591576 23.06870182320541 13 32.488509884374736 20.279840114442454 22.94674706205576 24.284902939127054 14 22.225865756676306 22.739033543617627 25.180648254658312 29.85445244504775 15 26.47930009775998 28.628038747802904 21.816554728954053 23.076106425483065 16 24.044243748736648 26.425467677564768 24.821842384289628 24.708446189408956 17 24.407396216805985 27.547255306263008 25.265849262684327 22.779499214246684 18 23.90867221248939 25.694681514593125 26.217888788258954 24.17875748465853 19 23.99271925652408 27.561776019820485 26.638777921360816 21.80672680229462 20 24.06909244001647 26.37665500073181 26.125725530818627 23.428527028433095 21 22.757746993010247 27.680365052662108 26.188078051816444 23.3738099025112 22 23.800045735439525 27.20550887023271 24.9408545372614 24.053590857066364 23 23.35890453428994 26.643124519061466 25.290832583096467 24.707138363552126 24 23.494726096068653 27.212009534050495 25.592228744896833 23.701035624984012 25 24.28092176335699 25.860236881881594 24.921583338606307 24.937258016155113 26 24.050167430558776 26.412043229799043 26.138303738324048 23.399485601318133 27 24.750373547760358 26.862108419148186 25.610692168758003 22.776825864333457 28 23.586158509647813 27.75841148394192 25.692758241274255 22.962671765136015 29 23.900959886480717 27.55994891016756 25.9183389688447 22.620752234507023 30 23.099801152771562 27.611608031512446 26.054795210818643 23.23379560489735 31 23.690880741860372 26.722824965395503 26.003328416805637 23.582965875938484 32 22.6778926848107 27.096824694983273 25.750360277174455 24.474922343031565 33 23.106628773053554 27.700232466046053 25.340510732922922 23.85262802797747 34 24.153312578649857 27.26599581611122 25.025478563291752 23.55521304194717 35 23.457837713812697 27.54235095929988 25.81925192745644 23.18055939943098 36 23.82166332754364 27.75135307086166 25.3095267997559 23.117456801838802 37 22.743572468650164 27.168774349842263 26.19448255196829 23.893170629539284 38 23.528633404680363 27.512771015655634 25.983076348757923 22.97551923090608 39 22.769344331123044 27.603376421707676 25.61026904862785 24.017010198541428 40 23.714748563747566 27.43547466097019 26.519573441057155 22.33020333422509 41 24.181565463704082 26.703976886870564 25.764996387131074 23.349461262294284 42 22.669430282207664 27.55167883489641 26.55471164459294 23.224179238302987 43 24.057091214506713 26.51645773828058 26.068546615048575 23.35790443216413 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1325.0 1 1556.5 2 1788.0 3 1782.5 4 1777.0 5 1777.0 6 2063.5 7 2350.0 8 3295.5 9 4241.0 10 6719.0 11 9197.0 12 9197.0 13 26610.5 14 44024.0 15 64626.5 16 85229.0 17 64695.5 18 44162.0 19 44162.0 20 51573.5 21 58985.0 22 49734.0 23 40483.0 24 46284.5 25 52086.0 26 52086.0 27 64438.0 28 76790.0 29 87658.0 30 98526.0 31 113425.5 32 128325.0 33 128325.0 34 140917.5 35 153510.0 36 173247.5 37 192985.0 38 214556.0 39 236127.0 40 236127.0 41 259056.0 42 281985.0 43 302460.0 44 322935.0 45 349229.5 46 375524.0 47 375524.0 48 415161.0 49 454798.0 50 481296.0 51 507794.0 52 509493.5 53 511193.0 54 511193.0 55 470567.0 56 429941.0 57 368286.0 58 306631.0 59 276504.0 60 246377.0 61 246377.0 62 214681.5 63 182986.0 64 154020.5 65 125055.0 66 103603.5 67 82152.0 68 82152.0 69 67226.0 70 52300.0 71 42899.5 72 33499.0 73 27401.5 74 21304.0 75 21304.0 76 17163.0 77 13022.0 78 10711.0 79 8400.0 80 6687.0 81 4974.0 82 4974.0 83 3945.5 84 2917.0 85 2323.5 86 1730.0 87 1392.0 88 1054.0 89 1054.0 90 779.0 91 504.0 92 384.5 93 265.0 94 198.5 95 132.0 96 132.0 97 91.5 98 51.0 99 43.5 100 36.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5199469.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.9553783125065 #Duplication Level Percentage of deduplicated Percentage of total 1 81.66813936825028 43.24767216324199 2 9.413334129700134 9.969733400405993 3 3.2021827418933793 5.087183955682296 4 1.5523292606446626 3.288167330520464 5 0.9194642084121669 2.4345287500637807 6 0.5995375492816014 1.9049242640856123 7 0.43622400886767315 1.6170285193010072 8 0.3324102359802586 1.408232784102732 9 0.24905965617971434 1.187014348384161 >10 1.482830713232996 14.659835186115867 >50 0.09811687500323844 3.532488848071427 >100 0.039698238305960774 3.666288372183272 >500 0.0032074730713876117 1.143539563553468 >1k 0.0028019269087956205 2.8249633105834646 >5k 3.318071339355431E-4 1.1350262409530185 >10k+ 3.318071339355431E-4 2.893372962751403 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 40466 0.7782717812145817 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 19825 0.3812889354662947 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19003 0.36547962878517015 No Hit GAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAG 12897 0.24804455993487026 No Hit GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG 12560 0.24156312885027295 No Hit GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 11249 0.21634901563986628 No Hit TCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTG 11140 0.21425264772229627 No Hit TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG 10561 0.20311689520602969 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 10500 0.20194369848151802 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7713 0.1483420710845665 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7318 0.1407451414750237 No Hit CTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGT 6873 0.13218657520604507 No Hit GGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAG 6636 0.12762841744031939 No Hit AAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTGGTATCAA 6354 0.12220478668110146 No Hit ACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGA 6262 0.1204353752277396 No Hit TATCAACGCAGAGTACGGGAAGCAGTGGTATCAACGCAGAGTA 5937 0.1141847369414069 No Hit CCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCGTT 5816 0.11185757622557227 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5228 0.10054872911060726 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9232733188716003E-5 0.0 0.0 0.0 3.8465466377432006E-5 2 1.9232733188716003E-5 0.0 0.0 1.9232733188716003E-5 3.8465466377432006E-5 3 1.9232733188716003E-5 0.0 0.0 1.9232733188716003E-5 3.8465466377432006E-5 4 1.9232733188716003E-5 0.0 0.0 1.9232733188716003E-5 3.8465466377432006E-5 5 1.9232733188716003E-5 0.0 0.0 1.9232733188716003E-5 3.8465466377432006E-5 6 1.9232733188716003E-5 0.0 0.0 1.9232733188716003E-5 5.7698199566148006E-5 7 1.9232733188716003E-5 0.0 0.0 1.9232733188716003E-5 5.7698199566148006E-5 8 1.9232733188716003E-5 0.0 0.0 1.9232733188716003E-5 5.7698199566148006E-5 9 1.9232733188716003E-5 0.0 0.0 1.9232733188716003E-5 2.6925826464202404E-4 10 1.9232733188716003E-5 0.0 0.0 5.7698199566148006E-5 2.6925826464202404E-4 11 1.9232733188716003E-5 0.0 0.0 5.7698199566148006E-5 2.6925826464202404E-4 12 1.9232733188716003E-5 0.0 0.0 7.693093275486401E-5 2.6925826464202404E-4 13 1.9232733188716003E-5 0.0 0.0 9.616366594358E-5 2.6925826464202404E-4 14 1.9232733188716003E-5 0.0 0.0 1.1539639913229601E-4 4.0388739696303603E-4 15 1.9232733188716003E-5 0.0 0.0 1.73094598698444E-4 4.0388739696303603E-4 16 1.9232733188716003E-5 0.0 0.0 3.65421930585604E-4 4.8081832971790005E-4 17 1.9232733188716003E-5 0.0 0.0 5.769819956614801E-4 4.8081832971790005E-4 18 1.9232733188716003E-5 0.0 0.0 7.6930932754864E-4 5.385165292840481E-4 19 1.9232733188716003E-5 0.0 0.0 0.0011539639913229602 5.385165292840481E-4 20 1.9232733188716003E-5 0.0 0.0 0.001577084121474712 5.577492624727641E-4 21 1.9232733188716003E-5 0.0 0.0 0.0033272628416478683 6.154474620389121E-4 22 1.9232733188716003E-5 0.0 0.0 0.005865983622558381 6.154474620389121E-4 23 1.9232733188716003E-5 0.0 0.0 0.007635395075920252 9.039384598696521E-4 24 1.9232733188716003E-5 0.0 0.0 0.011039588850322985 9.039384598696521E-4 25 1.9232733188716003E-5 0.0 0.0 0.013712938763554509 9.039384598696521E-4 26 1.9232733188716003E-5 0.0 0.0 0.017155598004334673 9.039384598696521E-4 27 1.9232733188716003E-5 0.0 0.0 0.021963781301513673 9.039384598696521E-4 28 3.8465466377432006E-5 0.0 0.0 0.02934915084598062 9.231711930583681E-4 29 3.8465466377432006E-5 0.0 0.0 0.0429082277440254 9.231711930583681E-4 30 3.8465466377432006E-5 0.0 0.0 0.06312183032536592 9.231711930583681E-4 31 3.8465466377432006E-5 0.0 0.0 0.10647241093273178 9.424039262470841E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACGGG 830 0.0 17.831326 1 AAGTACG 1235 0.0 17.076923 1 TATACCG 255 1.8189894E-12 13.784313 5 CGTATAC 95 0.0012461069 13.631579 3 AATCAAC 1520 0.0 13.509869 1 ACCGAAC 360 0.0 12.847222 8 TCTATAC 445 0.0 12.47191 3 GAGTACT 15140 0.0 12.280383 11 GTACTTT 15295 0.0 12.095456 13 CTTACAC 785 0.0 12.019109 3 AGTACTT 15550 0.0 11.9446945 12 CTAGAAC 550 0.0 11.772728 3 TACTTTT 15790 0.0 11.727992 14 TATTAGG 515 0.0 11.495145 2 GTATAAG 725 0.0 11.4827585 1 ACTATAC 565 0.0 11.460177 3 AATACCG 180 1.0048221E-5 11.305556 5 TAGTACT 460 0.0 11.26087 4 CTACACT 825 0.0 11.212122 4 ACTTTTT 16915 0.0 11.199527 15 >>END_MODULE