##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727203.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1278004 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.336650746007056 31.0 30.0 31.0 27.0 34.0 2 30.542984216011842 31.0 30.0 31.0 27.0 34.0 3 30.411717803700146 31.0 30.0 31.0 27.0 34.0 4 34.18033668126235 35.0 33.0 37.0 30.0 37.0 5 33.634882989411615 35.0 33.0 37.0 28.0 37.0 6 34.04671972857675 35.0 33.0 37.0 30.0 37.0 7 34.06140669356277 35.0 33.0 37.0 30.0 37.0 8 34.04062350352581 35.0 33.0 37.0 30.0 37.0 9 35.58402790601594 37.0 35.0 39.0 30.0 39.0 10 35.08557328459066 37.0 34.0 39.0 29.0 39.0 11 35.39589469203539 37.0 34.0 39.0 30.0 39.0 12 35.10037057786987 37.0 34.0 39.0 29.0 39.0 13 35.267634530095364 37.0 34.0 39.0 30.0 39.0 14 35.98050788573432 38.0 34.0 40.0 29.0 41.0 15 35.93297438818658 38.0 34.0 40.0 29.0 41.0 16 35.77400931452484 38.0 34.0 40.0 28.0 41.0 17 35.68487970303692 38.0 34.0 40.0 27.0 41.0 18 35.56063596045083 38.0 33.0 40.0 27.0 41.0 19 35.53346859634242 38.0 34.0 40.0 27.0 41.0 20 35.38807625015258 38.0 33.0 40.0 27.0 41.0 21 35.25135680326509 38.0 33.0 40.0 27.0 41.0 22 35.554150065258014 38.0 34.0 40.0 27.0 41.0 23 35.5316462233295 38.0 34.0 40.0 27.0 41.0 24 35.4581472358459 38.0 34.0 40.0 27.0 41.0 25 35.416438446202044 38.0 34.0 40.0 27.0 41.0 26 35.148008926419635 38.0 33.0 40.0 27.0 41.0 27 34.9849914397764 38.0 33.0 40.0 26.0 41.0 28 34.77670648918157 37.0 33.0 40.0 25.0 41.0 29 34.61733453103433 37.0 33.0 40.0 25.0 41.0 30 34.45622001183095 37.0 33.0 40.0 25.0 41.0 31 34.3067470837337 37.0 32.0 39.0 24.0 40.0 32 34.1328736060294 37.0 32.0 39.0 24.0 40.0 33 33.96075990372487 37.0 32.0 39.0 24.0 40.0 34 33.80559450518152 37.0 31.0 39.0 24.0 40.0 35 33.63772805092942 36.0 31.0 39.0 23.0 40.0 36 33.463014982738706 36.0 31.0 39.0 23.0 40.0 37 33.302434108187455 36.0 31.0 39.0 22.0 40.0 38 33.132325876914315 36.0 30.0 39.0 21.0 40.0 39 32.97281229166732 36.0 30.0 39.0 21.0 40.0 40 32.77355391688915 36.0 30.0 39.0 19.0 40.0 41 32.62896047273718 36.0 30.0 39.0 19.0 40.0 42 32.414125464396044 35.0 30.0 39.0 18.0 40.0 43 32.23202822526377 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 1.0 12 10.0 13 6.0 14 39.0 15 61.0 16 115.0 17 270.0 18 574.0 19 1109.0 20 1941.0 21 3474.0 22 5628.0 23 8835.0 24 12783.0 25 17793.0 26 23815.0 27 30991.0 28 38798.0 29 48080.0 30 58346.0 31 69961.0 32 82410.0 33 97038.0 34 115213.0 35 137173.0 36 157769.0 37 166807.0 38 142115.0 39 56846.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.07218443760739 26.41196741168259 15.548464637043388 20.967383513666622 2 27.201949289673582 25.063380083317423 26.42730382690508 21.30736680010391 3 28.021273798830048 23.81862654576981 27.399366512154895 20.760733143245247 4 27.019711988381882 18.02701712983684 26.891699869483976 28.0615710122973 5 15.752298114872879 39.17749866197602 31.39669359407326 13.673509629077843 6 35.64926244362302 36.67555031126663 12.678520568010743 14.9966666770996 7 29.920798369958153 31.507021887255437 19.12286659509673 19.44931314768968 8 28.663916544862143 35.74135918197439 17.640789856682765 17.9539344164807 9 27.656642702213762 14.055355069311206 17.75088340881562 40.537118819659405 10 17.557222043123495 29.80092394077014 31.614611534862174 21.02724248124419 11 37.82539021787099 22.151417366455817 18.977718379598187 21.045474036075003 12 21.609322036550747 26.247648677155937 28.379488640098156 23.76354064619516 13 32.58651772607911 20.1619869734367 22.86463892131793 24.386856379166264 14 22.546721293517077 21.761512483529003 24.681065160985412 31.01070106196851 15 26.48700630044976 28.548110960529076 21.109245354474634 23.855637384546526 16 25.04147091871387 26.687005674473635 24.132397081699274 24.13912632511322 17 25.08935809277592 27.034891909571492 24.5589215683206 23.31682842933199 18 24.982785656382923 25.617916688836655 25.414865681171577 23.984431973608846 19 25.864473037643076 25.90508323917609 25.808056938788926 22.42238678439191 20 25.210484474226995 25.39851205473535 25.958056469306822 23.432947001730824 21 25.025743268409173 25.33959205135508 26.07863512164281 23.556029558592932 22 25.205398418158314 25.640843064653946 25.31103189035402 23.84272662683372 23 24.95586868272713 25.58106234409282 25.646946331936366 23.81612264124369 24 24.786385645115352 25.73904307028773 25.609231270011673 23.865340014585243 25 25.4992942119117 25.467291182187225 25.438809268202604 23.594605337698475 26 25.10039092209414 25.614239079063918 25.557822980209764 23.72754701863218 27 25.416978350615494 26.104613131101313 25.135758573525592 23.342649944757607 28 24.94984366246115 26.355003583713355 25.39256528148582 23.30258747233968 29 24.91518023417767 26.544596104550532 25.700389044165746 22.83983461710605 30 25.202816266615752 25.934269376308684 25.3098581851074 23.553056171968162 31 25.387635719450017 25.64178202885124 25.787086738382666 23.18349551331608 32 24.860955051783876 25.934191129292238 25.687791274518702 23.51706254440518 33 25.070891796895783 25.76674251410794 25.174882081746226 23.987483607250056 34 25.108137376721825 26.081295520201813 25.47433341366694 23.336233689409422 35 25.19467857690586 26.074566276787863 25.43677484577513 23.293980300531143 36 25.20054710313896 26.01533328534183 25.199060409826572 23.58505920169264 37 24.806495128340757 26.32933856232062 25.732626814939547 23.131539494399078 38 25.349842410508888 25.920967383513666 25.42832416799947 23.300866037977972 39 24.675118387735875 26.54866494940548 25.490921781152487 23.28529488170616 40 25.452424249063384 26.013064121865032 25.750232393638832 22.784279235432752 41 24.933255294975602 25.902501087633528 25.337948864009814 23.826294753381053 42 24.87910835959825 26.241310668824198 25.347025517917004 23.532555453660553 43 25.192096425363303 25.916742044625842 25.28740129138876 23.6037602386221 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 250.0 1 248.0 2 246.0 3 230.5 4 215.0 5 215.0 6 387.0 7 559.0 8 618.5 9 678.0 10 1088.0 11 1498.0 12 1498.0 13 4715.0 14 7932.0 15 10219.5 16 12507.0 17 9329.0 18 6151.0 19 6151.0 20 8795.0 21 11439.0 22 9677.5 23 7916.0 24 9076.5 25 10237.0 26 10237.0 27 12595.5 28 14954.0 29 17250.5 30 19547.0 31 23111.5 32 26676.0 33 26676.0 34 30778.5 35 34881.0 36 40118.5 37 45356.0 38 51296.0 39 57236.0 40 57236.0 41 63755.5 42 70275.0 43 76805.0 44 83335.0 45 90399.0 46 97463.0 47 97463.0 48 103849.5 49 110236.0 50 114350.5 51 118465.0 52 118483.0 53 118501.0 54 118501.0 55 111097.5 56 103694.0 57 95062.5 58 86431.0 59 78988.0 60 71545.0 61 71545.0 62 62487.0 63 53429.0 64 45232.5 65 37036.0 66 30989.5 67 24943.0 68 24943.0 69 20688.0 70 16433.0 71 13432.0 72 10431.0 73 8642.0 74 6853.0 75 6853.0 76 5601.5 77 4350.0 78 3505.5 79 2661.0 80 2149.0 81 1637.0 82 1637.0 83 1267.0 84 897.0 85 716.0 86 535.0 87 431.5 88 328.0 89 328.0 90 241.5 91 155.0 92 106.5 93 58.0 94 41.5 95 25.0 96 25.0 97 16.5 98 8.0 99 5.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1278004.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.43427475510714 #Duplication Level Percentage of deduplicated Percentage of total 1 85.10837057889819 58.24329616155796 2 8.23874977722571 11.27625731786484 3 2.7142374394543882 5.572406120466603 4 1.2606967897912638 3.450994819818276 5 0.7165584641139443 2.4518579405635617 6 0.47179871664273276 1.9372321802301424 7 0.30626245855786327 1.46711944652864 8 0.22825688804593453 1.249647567302497 9 0.17153841380828216 1.056519624745012 >10 0.7429543358423839 8.330645826081929 >50 0.026467888675615777 1.2134052433165903 >100 0.011928948188108517 1.5508979620036507 >500 0.0014911005170505816 0.6739506891528992 >1k 4.588001590924866E-4 0.59686944331687 >5k 2.294000795462433E-4 0.9288996570504786 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6249 0.4889656057414531 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5585 0.4370095868244544 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3634 0.2843496577475501 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1613 0.12621243751975736 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.824701644126309E-5 2 0.0 0.0 0.0 0.0 7.824701644126309E-5 3 0.0 0.0 0.0 0.0 7.824701644126309E-5 4 0.0 0.0 0.0 7.824701644126309E-5 1.5649403288252618E-4 5 7.824701644126309E-5 0.0 0.0 2.3474104932378928E-4 2.3474104932378928E-4 6 7.824701644126309E-5 0.0 0.0 3.1298806576505236E-4 3.1298806576505236E-4 7 7.824701644126309E-5 0.0 0.0 3.9123508220631546E-4 3.1298806576505236E-4 8 7.824701644126309E-5 0.0 0.0 3.9123508220631546E-4 3.9123508220631546E-4 9 7.824701644126309E-5 0.0 0.0 3.9123508220631546E-4 4.6948209864757857E-4 10 7.824701644126309E-5 0.0 0.0 3.9123508220631546E-4 4.6948209864757857E-4 11 7.824701644126309E-5 0.0 0.0 3.9123508220631546E-4 4.6948209864757857E-4 12 7.824701644126309E-5 0.0 0.0 3.9123508220631546E-4 4.6948209864757857E-4 13 7.824701644126309E-5 0.0 0.0 3.9123508220631546E-4 4.6948209864757857E-4 14 7.824701644126309E-5 0.0 0.0 4.6948209864757857E-4 7.042231479713678E-4 15 7.824701644126309E-5 0.0 0.0 4.6948209864757857E-4 7.042231479713678E-4 16 7.824701644126309E-5 0.0 0.0 4.6948209864757857E-4 7.824701644126309E-4 17 7.824701644126309E-5 0.0 0.0 4.6948209864757857E-4 7.824701644126309E-4 18 7.824701644126309E-5 0.0 0.0 4.6948209864757857E-4 7.824701644126309E-4 19 7.824701644126309E-5 0.0 0.0 4.6948209864757857E-4 7.824701644126309E-4 20 7.824701644126309E-5 0.0 0.0 4.6948209864757857E-4 8.60717180853894E-4 21 1.5649403288252618E-4 0.0 0.0 5.477291150888416E-4 9.389641972951571E-4 22 1.5649403288252618E-4 0.0 0.0 5.477291150888416E-4 9.389641972951571E-4 23 1.5649403288252618E-4 0.0 0.0 7.042231479713678E-4 0.0010954582301776832 24 1.5649403288252618E-4 0.0 0.0 7.042231479713678E-4 0.0010954582301776832 25 1.5649403288252618E-4 0.0 0.0 7.042231479713678E-4 0.0010954582301776832 26 1.5649403288252618E-4 0.0 0.0 9.389641972951571E-4 0.0010954582301776832 27 1.5649403288252618E-4 0.0 0.0 0.0014866933123839987 0.0010954582301776832 28 1.5649403288252618E-4 0.0 0.0 0.0023474104932378927 0.0010954582301776832 29 1.5649403288252618E-4 0.0 0.0 0.005712032200212206 0.0010954582301776832 30 1.5649403288252618E-4 0.0 0.0 0.00938964197295157 0.0010954582301776832 31 1.5649403288252618E-4 0.0 0.0 0.021361435488464826 0.0010954582301776832 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACAC 145 1.546141E-10 17.862068 5 CGGTAAC 115 6.406481E-8 17.695652 1 GTATACT 140 1.869921E-9 17.178572 4 TAATACC 95 7.060661E-5 15.578948 4 TATACAC 215 0.0 15.488372 3 TGTTACG 145 5.3461918E-8 15.310345 22 GGTTATA 145 5.3461918E-8 15.310345 1 GGACCGT 85 5.364735E-4 15.235293 6 TGTATAC 135 3.9728548E-7 15.074073 3 GACCGTG 175 2.237357E-9 14.8 7 CTTATAC 175 2.237357E-9 14.8 1 TACACTC 175 2.237357E-9 14.8 5 GTAGGAC 155 1.2102464E-7 14.32258 3 CGCTACA 105 1.6558598E-4 14.095238 2 CGTACAC 110 2.4566965E-4 13.454545 3 TAGATAG 125 4.84521E-5 13.32 5 GGGTTAG 125 4.84521E-5 13.32 1 TAAGACC 140 9.560043E-6 13.214285 4 ACCCTCG 155 1.8877854E-6 13.129032 7 TACACTG 1010 0.0 13.004951 5 >>END_MODULE