##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727193.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3423772 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.172483156004546 31.0 31.0 33.0 30.0 34.0 2 31.2763685782815 31.0 31.0 34.0 30.0 34.0 3 31.350729546243148 31.0 31.0 34.0 28.0 34.0 4 35.16577943858411 35.0 35.0 37.0 33.0 37.0 5 35.00905609368848 35.0 35.0 37.0 32.0 37.0 6 35.07505552355706 36.0 35.0 37.0 32.0 37.0 7 34.87732944833943 36.0 35.0 37.0 32.0 37.0 8 34.82804637691996 36.0 35.0 37.0 32.0 37.0 9 36.46674603332231 38.0 35.0 39.0 32.0 39.0 10 36.24048914472109 38.0 35.0 39.0 32.0 39.0 11 36.36561342285643 38.0 35.0 39.0 32.0 39.0 12 36.23803804692602 38.0 35.0 39.0 32.0 39.0 13 36.33431986709395 38.0 35.0 39.0 32.0 39.0 14 37.3034206132885 39.0 36.0 41.0 32.0 41.0 15 37.17867836993818 39.0 36.0 41.0 31.0 41.0 16 37.09357778496933 39.0 36.0 40.0 31.0 41.0 17 37.049885039073864 39.0 36.0 40.0 31.0 41.0 18 37.03438868008734 39.0 36.0 40.0 31.0 41.0 19 37.026039409166266 39.0 36.0 40.0 31.0 41.0 20 36.95973884943273 39.0 36.0 40.0 31.0 41.0 21 36.82020853024092 39.0 36.0 40.0 30.0 41.0 22 36.817935890590846 39.0 35.0 40.0 31.0 41.0 23 36.59971779662898 38.0 35.0 40.0 30.0 41.0 24 36.50261670461701 38.0 35.0 40.0 30.0 41.0 25 36.40783293981024 38.0 35.0 40.0 30.0 41.0 26 36.06372591399194 38.0 34.0 40.0 29.0 41.0 27 36.219612170436584 38.0 35.0 40.0 30.0 41.0 28 36.07907594314107 38.0 35.0 40.0 29.0 41.0 29 35.99311782443457 38.0 35.0 40.0 29.0 41.0 30 36.110141679995046 38.0 35.0 40.0 29.0 41.0 31 36.051199378930605 38.0 35.0 40.0 29.0 41.0 32 35.796153774258336 38.0 34.0 40.0 28.0 41.0 33 35.77027705115878 38.0 34.0 40.0 28.0 41.0 34 35.768783669006 38.0 34.0 40.0 28.0 41.0 35 35.50197530676692 38.0 34.0 40.0 27.0 41.0 36 35.38111503920238 38.0 34.0 40.0 26.0 41.0 37 35.15530648653006 38.0 34.0 40.0 25.0 41.0 38 35.02972832303086 38.0 33.0 40.0 25.0 41.0 39 34.96977602480539 38.0 33.0 40.0 25.0 41.0 40 34.84156012725146 38.0 33.0 40.0 24.0 41.0 41 34.69694535734272 38.0 33.0 40.0 24.0 41.0 42 34.54438087582935 38.0 33.0 40.0 23.0 41.0 43 34.08657907126993 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 3.0 13 12.0 14 7.0 15 37.0 16 129.0 17 253.0 18 511.0 19 1000.0 20 2001.0 21 3763.0 22 6471.0 23 10484.0 24 16748.0 25 25425.0 26 37205.0 27 52153.0 28 70665.0 29 93132.0 30 116292.0 31 141521.0 32 168847.0 33 200880.0 34 239709.0 35 285205.0 36 347133.0 37 438056.0 38 588046.0 39 578083.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 43.328761377802024 18.70939420031474 11.807211461510873 26.15463296037236 2 16.055742029551034 24.971727089303844 32.766025307759975 26.20650557338514 3 21.4194461547089 26.595462548323894 28.92745194481408 23.05763935215312 4 15.471152868824209 17.51252711921238 32.052543218415245 34.96377679354817 5 13.623220237796207 37.93795264404289 33.675723733940224 14.763103384220678 6 33.74588027473792 31.88357752794286 17.35530286479357 17.01523933252565 7 25.88934076217692 31.054988474699837 23.239806856297673 19.81586390682557 8 27.63387865780782 31.945555954076383 23.198624207453065 17.221941180662732 9 28.391259698367765 13.81657423449926 19.83452753279132 37.957638534341655 10 17.96159323693283 26.830670967576115 33.141429978398094 22.06630581709296 11 33.77771650682347 22.534707334483723 20.593923894464936 23.093652264227877 12 21.65468378151349 27.226579339979413 29.303995709994705 21.814741168512388 13 30.961319854242632 18.915803972928106 24.79277241592022 25.330103756909043 14 22.968059789028008 22.03925962359643 25.73226254551997 29.26041804185559 15 28.580057316900774 24.378434077970145 23.340952610162123 23.700555994966955 16 23.06424025898921 25.22010811467586 28.99071550325197 22.724936123082962 17 25.553015796612627 26.572622242368944 26.47162252626635 21.40273943475208 18 25.673234082176034 21.967350629656416 29.320906882818132 23.038508405349422 19 24.581251321641744 28.27402058314631 27.08553606957473 20.05919202563722 20 23.61789862175402 24.048972887213285 28.490682206642266 23.842446284390434 21 22.580796852126834 27.055393875526757 27.93813373086759 22.425675541478814 22 23.855326814986512 26.57639001662494 23.769398195907904 25.798884972480646 23 20.781611626007805 25.845208150542735 26.773482580031615 26.599697643417848 24 21.92158239508939 29.716114273964507 25.704194087690418 22.658109243255684 25 24.24130461958331 25.086600392783165 23.4182357937386 27.253859193894918 26 23.44314983591197 25.615870449317303 26.74082853647965 24.200151178291076 27 25.369271084639983 24.858109710576525 24.353227960273056 25.419391244510443 28 22.784870020550436 26.37888854748505 27.11775199984111 23.718489432123402 29 23.866542515097382 24.32013580343551 27.671030664425082 24.142291017042023 30 22.735334011727417 27.561268682610873 28.298788587557816 21.404608718103894 31 26.34763646644695 24.690049454227676 23.833976094202537 25.12833798512284 32 20.19056759620676 26.755578350427538 27.03150209768641 26.02235195567929 33 22.632465012273016 25.821725278435597 27.50989259798842 24.03591711130297 34 21.965510553856973 25.606699277872476 27.53147697919137 24.89631318907918 35 21.939311379379234 27.535040300580764 28.728636135817453 21.79701218422255 36 24.254214357731765 25.613679882889397 26.234398785900463 23.897706973478375 37 22.600365912216116 26.238779918756272 27.58992129148787 23.570932877539743 38 23.74670392771481 25.396375693241257 27.7113662942509 23.14555408479303 39 23.839846812229318 22.70364381740373 27.230055038711694 26.226454331655262 40 23.287093883588042 24.93147908213514 28.018045594157552 23.76338144011926 41 21.63149298493007 24.726967800425964 28.36269471214789 25.278844502496078 42 23.71296920472508 25.766026476062077 27.879105267523656 22.64189905168919 43 22.56230847147532 22.79944458918409 28.801304526119146 25.836942413221443 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 618.0 1 864.5 2 1111.0 3 4219.5 4 7328.0 5 7328.0 6 9795.0 7 12262.0 8 12213.5 9 12165.0 10 13821.0 11 15477.0 12 15477.0 13 21526.5 14 27576.0 15 34929.5 16 42283.0 17 38278.5 18 34274.0 19 34274.0 20 34254.5 21 34235.0 22 29493.5 23 24752.0 24 26596.5 25 28441.0 26 28441.0 27 31286.0 28 34131.0 29 36729.0 30 39327.0 31 44054.5 32 48782.0 33 48782.0 34 58156.5 35 67531.0 36 82225.5 37 96920.0 38 112024.5 39 127129.0 40 127129.0 41 137941.0 42 148753.0 43 167239.5 44 185726.0 45 221491.5 46 257257.0 47 257257.0 48 402215.5 49 547174.0 50 546928.0 51 546682.0 52 397529.5 53 248377.0 54 248377.0 55 220599.5 56 192822.0 57 184196.5 58 175571.0 59 162429.5 60 149288.0 61 149288.0 62 124006.5 63 98725.0 64 85550.5 65 72376.0 66 61752.5 67 51129.0 68 51129.0 69 42783.0 70 34437.0 71 29877.0 72 25317.0 73 19163.5 74 13010.0 75 13010.0 76 10191.0 77 7372.0 78 6519.5 79 5667.0 80 4678.0 81 3689.0 82 3689.0 83 3187.0 84 2685.0 85 2339.5 86 1994.0 87 1384.5 88 775.0 89 775.0 90 552.0 91 329.0 92 228.5 93 128.0 94 130.0 95 132.0 96 132.0 97 68.5 98 5.0 99 7.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3423772.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.087709501767286 #Duplication Level Percentage of deduplicated Percentage of total 1 83.70628779790883 34.39299636511806 2 8.297024463728317 6.81811461789451 3 2.7540018910650295 3.3946688900219306 4 1.4088902508768202 2.3155229339159527 5 0.827277879653813 1.6995476598226935 6 0.5565311728753357 1.3719954695867775 7 0.39950798739041904 1.1490407690673272 8 0.28006676601745656 0.9205841538579747 9 0.22090960525570452 0.8169002718206826 >10 1.299917233261305 9.79899558653721 >50 0.11193708300449964 3.222099395723019 >100 0.10848789290822426 9.619513918765936 >500 0.01671452721725753 4.83667492317181 >1k 0.009912944713260473 7.645648945469835 >5k 0.0014471452136146673 4.082842537350071 >10k+ 0.0010853589102110006 7.9148535618762175 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 40054 1.1698793027105776 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 36687 1.0715374738738443 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 25914 0.7568845121696188 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 20175 0.589262369106354 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 17308 0.5055243164556519 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 17209 0.5026327687708176 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 15184 0.4434874752173918 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14337 0.4187486783582552 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 13923 0.40665675167622145 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGT 12045 0.3518049683214887 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 11244 0.3284097188714669 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCTGT 11009 0.3215459440640323 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC 10534 0.30767235668730275 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 10397 0.30367092201233026 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 10205 0.2980630719568943 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 9652 0.28191129549514393 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9338 0.27274012405031645 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7800 0.22781890850208483 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT 7672 0.22408034179846087 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCT 7581 0.2214224545326032 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTC 7415 0.2165740008388409 No Hit GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGC 7403 0.21622351021037614 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7301 0.21324433986842584 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCT 7152 0.20889241456498855 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 7088 0.2070231312131766 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 6992 0.2042192061854586 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGTCT 6966 0.203459809823785 No Hit CCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCA 6800 0.19861135613002268 No Hit GCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 5916 0.17279187983311972 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATC 5769 0.16849836963442658 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT 5744 0.16776818082512504 No Hit GATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTT 5258 0.15357331037230282 No Hit CATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGT 5220 0.15246342338216448 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGCTGTCT 5140 0.1501268191923995 No Hit GTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG 5124 0.1496594983544465 No Hit TACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC 4630 0.1352309674826478 No Hit AAAAAGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 4595 0.13420870314962563 No Hit ACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAG 4444 0.12979836274144424 No Hit GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTG 4177 0.12199994625810365 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCTGT 4056 0.11846583242108412 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3988 0.11647971885978389 No Hit GGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGT 3903 0.1139970769081586 No Hit GCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAA 3752 0.10958673649997722 No Hit ATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTG 3647 0.10651994350091068 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGT 3644 0.10643232084379452 No Hit TGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCT 3577 0.10447541483486633 No Hit CTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT 3572 0.10432937707300603 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3568 0.10421254686351779 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTC 3516 0.10269375414017055 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGG 3513 0.10260613148305436 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 3484 0.10175911246426456 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.841510474412432E-5 2 0.0 0.0 0.0 0.0 5.841510474412432E-5 3 0.0 0.0 0.0 0.0 5.841510474412432E-5 4 0.0 0.0 0.0 0.0 5.841510474412432E-5 5 0.0 0.0 0.0 0.0 5.841510474412432E-5 6 0.0 0.0 0.0 0.0 8.762265711618648E-5 7 0.0 0.0 0.0 0.0 8.762265711618648E-5 8 0.0 0.0 0.0 0.0 8.762265711618648E-5 9 0.0 0.0 0.0 0.0 1.1683020948824864E-4 10 0.0 0.0 0.0 1.1683020948824864E-4 1.1683020948824864E-4 11 0.0 0.0 0.0 2.0445286660443512E-4 1.1683020948824864E-4 12 0.0 0.0 0.0 4.6732083795299455E-4 1.1683020948824864E-4 13 0.0 0.0 0.0 5.54943495069181E-4 1.1683020948824864E-4 14 0.0 2.920755237206216E-5 0.0 9.930567806501133E-4 2.0445286660443512E-4 15 0.0 2.920755237206216E-5 0.0 0.0016940380375796052 3.2128307609268376E-4 16 2.920755237206216E-5 2.920755237206216E-5 0.0 0.003913812017856329 3.2128307609268376E-4 17 2.920755237206216E-5 2.920755237206216E-5 0.0 0.006484076626597799 3.2128307609268376E-4 18 2.920755237206216E-5 2.920755237206216E-5 0.0 0.008207322216549467 3.2128307609268376E-4 19 2.920755237206216E-5 2.920755237206216E-5 0.0 0.01299736080556766 3.2128307609268376E-4 20 2.920755237206216E-5 2.920755237206216E-5 0.0 0.016998795480540178 3.796981808368081E-4 21 2.920755237206216E-5 2.920755237206216E-5 0.0 0.027016985944157496 3.796981808368081E-4 22 2.920755237206216E-5 2.920755237206216E-5 0.0 0.04030642227344578 3.796981808368081E-4 23 2.920755237206216E-5 2.920755237206216E-5 0.0 0.05736363285873008 4.6732083795299455E-4 24 2.920755237206216E-5 2.920755237206216E-5 0.0 0.08400092062205076 4.6732083795299455E-4 25 2.920755237206216E-5 2.920755237206216E-5 0.0 0.10085367834073063 4.6732083795299455E-4 26 2.920755237206216E-5 2.920755237206216E-5 0.0 0.13333247657846375 4.6732083795299455E-4 27 2.920755237206216E-5 2.920755237206216E-5 0.0 0.19691731809244306 4.6732083795299455E-4 28 2.920755237206216E-5 2.920755237206216E-5 0.0 0.30168480845103 4.6732083795299455E-4 29 2.920755237206216E-5 2.920755237206216E-5 0.0 0.39143961689037704 4.6732083795299455E-4 30 2.920755237206216E-5 2.920755237206216E-5 0.0 0.5315190380667871 4.6732083795299455E-4 31 2.920755237206216E-5 2.920755237206216E-5 0.0 0.8473695094182674 4.6732083795299455E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAAAGTA 2090 0.0 17.968899 2 AAAAAGT 2095 0.0 17.837708 1 TGGGCTG 2950 0.0 15.677966 36 CAAGACG 850 0.0 15.452942 4 GGGCTGT 3150 0.0 14.976191 37 AGTACTC 2645 0.0 14.967864 5 GGGTATA 100 1.0943679E-4 14.8 1 AAGACGG 875 0.0 14.799998 5 TACTCCT 2720 0.0 14.623162 37 AAGTACT 2695 0.0 14.346939 4 AAAGTAC 2645 0.0 14.338374 3 TATAACG 155 1.2122837E-7 14.32258 2 GTACTCC 2845 0.0 13.980667 36 TATCGTC 80 0.0063019786 13.875001 5 TACACCG 160 1.786484E-7 13.875001 5 TGGAGTG 900 0.0 13.7722225 5 TACACTA 175 3.572677E-8 13.742858 5 TAGTACT 150 1.3075442E-6 13.566667 4 ATAACGC 645 0.0 13.48062 3 TTGCGCG 485 0.0 13.350515 18 >>END_MODULE