##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727177.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3015433 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.206606812354977 31.0 31.0 33.0 30.0 34.0 2 31.438564212834443 31.0 31.0 34.0 30.0 34.0 3 31.59812637190082 31.0 31.0 34.0 30.0 34.0 4 35.33762547534633 37.0 35.0 37.0 33.0 37.0 5 35.13031130189263 37.0 35.0 37.0 32.0 37.0 6 35.211913181291045 37.0 35.0 37.0 32.0 37.0 7 35.10551221002092 37.0 35.0 37.0 32.0 37.0 8 35.08630568147261 37.0 35.0 37.0 32.0 37.0 9 36.569213442978175 38.0 35.0 39.0 32.0 39.0 10 36.31030402598897 38.0 35.0 39.0 32.0 39.0 11 36.43071492551816 38.0 35.0 39.0 32.0 39.0 12 36.23890366657127 38.0 35.0 39.0 32.0 39.0 13 36.25479889621159 38.0 35.0 39.0 32.0 39.0 14 37.16915845916656 39.0 36.0 40.0 31.0 41.0 15 37.104162155153176 39.0 36.0 40.0 31.0 41.0 16 37.01607530328148 39.0 36.0 40.0 31.0 41.0 17 37.30326125634362 39.0 36.0 40.0 32.0 41.0 18 37.3291530602736 39.0 36.0 40.0 32.0 41.0 19 37.40042010550392 39.0 36.0 41.0 32.0 41.0 20 37.36922392240186 39.0 36.0 41.0 32.0 41.0 21 37.31639237217342 39.0 36.0 40.0 31.0 41.0 22 37.25101569161046 39.0 36.0 40.0 31.0 41.0 23 37.10652931104753 39.0 36.0 40.0 31.0 41.0 24 36.977486483699025 39.0 36.0 40.0 31.0 41.0 25 36.896770049276505 39.0 36.0 40.0 30.0 41.0 26 36.57617728531856 39.0 36.0 40.0 30.0 41.0 27 36.364135432622774 39.0 35.0 40.0 30.0 41.0 28 36.136735586564185 39.0 35.0 40.0 29.0 41.0 29 35.942861937240856 38.0 35.0 40.0 27.0 41.0 30 35.79322571584247 38.0 35.0 40.0 27.0 41.0 31 35.624105393819065 38.0 34.0 40.0 27.0 41.0 32 35.44087134418175 38.0 34.0 40.0 26.0 41.0 33 35.26735563350272 38.0 34.0 40.0 25.0 41.0 34 35.13577254079265 38.0 34.0 40.0 25.0 41.0 35 34.950920813030834 38.0 34.0 40.0 25.0 41.0 36 34.836564102070916 38.0 33.0 40.0 24.0 41.0 37 34.732483527241364 38.0 33.0 40.0 24.0 41.0 38 34.613648520792864 38.0 33.0 40.0 24.0 41.0 39 34.45832124275353 38.0 33.0 40.0 23.0 41.0 40 34.332578438983724 38.0 33.0 40.0 23.0 41.0 41 34.088937475977744 38.0 33.0 40.0 21.0 41.0 42 33.876445273365384 38.0 32.0 40.0 20.0 41.0 43 33.58128998389286 37.0 32.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 19.0 11 45.0 12 43.0 13 35.0 14 100.0 15 171.0 16 270.0 17 562.0 18 837.0 19 1584.0 20 2982.0 21 5245.0 22 8803.0 23 13593.0 24 20034.0 25 27469.0 26 36699.0 27 47863.0 28 61144.0 29 75612.0 30 91792.0 31 111779.0 32 135406.0 33 163235.0 34 198655.0 35 245465.0 36 309650.0 37 411039.0 38 627234.0 39 418060.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.49606341775792 23.33183990491581 13.894057669329746 24.27803900799653 2 20.284317376642093 24.747026380622618 31.999384499672185 22.969271743063103 3 20.060502090412886 26.26713974410972 30.209127511703958 23.463230653773437 4 15.43784922430709 17.711917326632694 34.356691062278614 32.4935423867816 5 13.123256262035998 39.840745922724864 33.97299823939049 13.062999575848643 6 33.65155186668051 38.69470818950379 14.375248927765929 13.278491016049768 7 28.088204911201807 32.685853076490176 21.25048044509694 17.975461567211077 8 27.256185098458495 35.68419527145853 19.228515440402756 17.83110418968022 9 27.642829404599606 13.903376397353215 18.43022212730311 40.023572070744066 10 16.342263283581495 28.072817403006468 33.358426468105904 22.22649284530613 11 36.99475332398365 22.512355605314394 20.58987880015905 19.903012270542902 12 21.09090137303664 26.922435351738873 29.539969881605728 22.446693393618762 13 30.154508490157134 20.455403917115717 24.94102836972335 24.449059223003793 14 22.40829094859677 21.575840020322122 24.8441600261057 31.171709004975405 15 25.155856555260886 29.146792517028235 21.596400914893483 24.100950012817396 16 24.6561273289773 27.02019908915237 24.103503543272225 24.220170038598106 17 23.918389166663626 27.581014069952808 24.82389759613296 23.676699167250607 18 24.438811938451295 25.6020279674594 26.14327693568386 23.815883158405445 19 24.9590025711067 26.157702724616993 25.828463109609796 23.054831594666503 20 24.49173966060596 25.28492591279594 25.938198593701138 24.285135832896966 21 25.018695490830005 26.23281631526882 25.502539767920563 23.245948425980615 22 24.754919111119364 25.650246581502557 25.458997099255733 24.13583720812235 23 23.745644489531024 25.429482266725874 25.892964625644144 24.931908618098962 24 24.18627772528854 26.276856424931346 25.543827370729176 23.993038479050934 25 24.565593067396954 25.515075281062455 25.312086191270044 24.607245460270548 26 24.442227699968793 26.090680840860998 25.676942581712147 23.790148877458066 27 25.031861095902315 25.907987343774508 25.029141751781587 24.031009808541594 28 24.36877224597595 25.930438514137105 25.941780168884538 23.759009071002406 29 24.505369543942777 25.97643522505723 25.800672739205282 23.71752249179471 30 24.494492167459864 26.278680375256226 25.556959813068303 23.669867644215607 31 24.961124986030196 25.7425716306746 25.35407021147543 23.94223317181977 32 24.02938483461579 26.06046959093437 25.23063851858091 24.679507055868925 33 24.179180900388104 25.598645368675076 25.685233265007053 24.536940465929767 34 24.683353932917758 25.69412087749918 25.9000282878114 23.722496901771652 35 24.991535212355902 25.803458408792366 25.78017817010028 23.424828208751446 36 24.398817682236682 25.99006510839405 25.72817900447465 23.88293820489462 37 24.580648948260496 25.75776016247086 25.80083855287118 23.860752336397457 38 24.418251043879934 25.212299527132586 26.258849060814814 24.110600368172662 39 24.736812258803294 25.147366895566904 25.69617696695632 24.419643878673476 40 24.6097658279922 25.54568448378724 26.16271029732712 23.681839390893447 41 23.8008272775419 25.763994756308627 26.419953618601376 24.0152243475481 42 24.78453343184876 25.7167046987945 26.256262367626803 23.242499501729935 43 24.297472369639785 25.059850442705905 26.186023698752386 24.456653488901924 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1324.0 1 1040.0 2 756.0 3 706.5 4 657.0 5 657.0 6 935.5 7 1214.0 8 1559.5 9 1905.0 10 2683.5 11 3462.0 12 3462.0 13 7345.0 14 11228.0 15 15750.0 16 20272.0 17 17793.0 18 15314.0 19 15314.0 20 19342.5 21 23371.0 22 22098.0 23 20825.0 24 25492.0 25 30159.0 26 30159.0 27 36678.5 28 43198.0 29 50037.0 30 56876.0 31 65397.0 32 73918.0 33 73918.0 34 86655.5 35 99393.0 36 116501.5 37 133610.0 38 148829.0 39 164048.0 40 164048.0 41 176392.5 42 188737.0 43 197419.0 44 206101.0 45 220281.0 46 234461.0 47 234461.0 48 255708.5 49 276956.0 50 273609.5 51 270263.0 52 253128.0 53 235993.0 54 235993.0 55 225729.0 56 215465.0 57 202910.0 58 190355.0 59 174041.5 60 157728.0 61 157728.0 62 134014.5 63 110301.0 64 94426.0 65 78551.0 66 65522.5 67 52494.0 68 52494.0 69 42805.0 70 33116.0 71 29246.5 72 25377.0 73 19997.0 74 14617.0 75 14617.0 76 11318.0 77 8019.0 78 6935.5 79 5852.0 80 4591.5 81 3331.0 82 3331.0 83 2775.5 84 2220.0 85 1799.5 86 1379.0 87 1295.5 88 1212.0 89 1212.0 90 865.5 91 519.0 92 448.5 93 378.0 94 359.0 95 340.0 96 340.0 97 197.0 98 54.0 99 69.0 100 84.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3015433.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.142581386065515 #Duplication Level Percentage of deduplicated Percentage of total 1 83.08231153434508 45.81373125525074 2 8.88359180881647 9.797283686364944 3 2.9367146761501357 4.858140841117856 4 1.437282905221815 3.1702195830397844 5 0.8178937993635855 2.255038769828243 6 0.5305668350940952 1.7554094930954005 7 0.38762931857488037 1.4962416872998319 8 0.29866663639117996 1.3175399443602462 9 0.22405769746998327 1.1119607836121699 >10 1.2589247495014622 12.562756759957505 >50 0.07894585716984807 3.0020591943342416 >100 0.05177274155258514 5.656267463832645 >500 0.008221017153764694 3.1773336887300365 >1k 0.0032404009217398616 3.225313670772682 >5k 1.2001484895332822E-4 0.45627308566854596 >10k+ 6.000742447666411E-5 0.3444300927350711 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10409 0.34519088966659184 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8439 0.27986030530275424 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5350 0.1774206225109296 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4809 0.15947958386075897 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 4570 0.15155369063083146 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 3746 0.12422759849083033 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 3355 0.11126096981760164 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACT 3190 0.10578911884296549 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 3.316273317961301E-5 5 0.0 0.0 0.0 0.0 3.316273317961301E-5 6 0.0 0.0 0.0 0.0 3.316273317961301E-5 7 0.0 0.0 0.0 0.0 3.316273317961301E-5 8 0.0 0.0 0.0 0.0 6.632546635922602E-5 9 0.0 0.0 0.0 0.0 1.3265093271845203E-4 10 0.0 0.0 0.0 0.0 1.3265093271845203E-4 11 0.0 0.0 0.0 0.0 1.3265093271845203E-4 12 0.0 0.0 0.0 3.316273317961301E-5 1.6581366589806505E-4 13 0.0 0.0 0.0 3.316273317961301E-5 1.6581366589806505E-4 14 0.0 0.0 0.0 3.316273317961301E-5 2.3213913225729108E-4 15 0.0 0.0 0.0 6.632546635922602E-5 2.6530186543690407E-4 16 0.0 0.0 0.0 1.6581366589806505E-4 4.311155313349691E-4 17 0.0 0.0 0.0 2.3213913225729108E-4 4.311155313349691E-4 18 0.0 0.0 0.0 2.984645986165171E-4 4.974409976941952E-4 19 0.0 0.0 0.0 3.6479006497574314E-4 4.974409976941952E-4 20 0.0 0.0 0.0 5.306037308738081E-4 4.974409976941952E-4 21 0.0 0.0 0.0 6.632546635922602E-4 5.637664640534212E-4 22 0.0 0.0 0.0 9.948819953883904E-4 5.637664640534212E-4 23 0.0 0.0 0.0 0.0015918111926214245 7.295801299514863E-4 24 0.0 0.0 0.0 0.002586693188009815 7.295801299514863E-4 25 0.0 3.316273317961301E-5 0.0 0.00308413418570401 7.295801299514863E-4 26 0.0 3.316273317961301E-5 0.0 0.0037473888492962704 7.295801299514863E-4 27 0.0 3.316273317961301E-5 0.0 0.0068646857681798935 7.295801299514863E-4 28 0.0 3.316273317961301E-5 0.0 0.012502350408714105 7.295801299514863E-4 29 0.0 3.316273317961301E-5 0.0 0.020196104506384323 7.295801299514863E-4 30 0.0 3.316273317961301E-5 0.0 0.03684379656255005 7.295801299514863E-4 31 0.0 3.316273317961301E-5 0.0 0.09918973494022251 7.295801299514863E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTAAT 20 0.0018424102 37.0 1 AAGACGG 1140 0.0 19.311405 5 CAAGACG 1145 0.0 19.065502 4 ACGAACG 345 0.0 18.231884 15 CGCAAGA 1245 0.0 16.939758 2 GCGCAAG 1290 0.0 16.77907 1 ACGGACC 1235 0.0 16.777328 8 CGAACGA 380 0.0 16.552631 16 AGGTTAT 545 0.0 16.293577 1 GACGGAC 1280 0.0 16.1875 7 GCAAGAC 1520 0.0 15.944079 3 TATCTAG 870 0.0 15.522989 1 CGGACCA 1360 0.0 15.507352 9 CGCTTCG 765 0.0 15.477124 32 TAACGAA 410 0.0 15.341463 13 AGACGGA 1405 0.0 15.274021 6 GGTTATC 570 0.0 15.254387 2 GAGCGAA 1385 0.0 15.227438 16 ATACCGT 750 0.0 15.046666 6 TACCGTC 740 0.0 15.000001 7 >>END_MODULE