##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727176.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5677213 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.15488973198645 31.0 31.0 33.0 30.0 34.0 2 31.291146025347295 31.0 31.0 34.0 30.0 34.0 3 31.34667450384546 31.0 31.0 34.0 28.0 34.0 4 35.18565377060892 35.0 35.0 37.0 33.0 37.0 5 35.042575820213195 35.0 35.0 37.0 32.0 37.0 6 35.06426410282651 36.0 35.0 37.0 32.0 37.0 7 34.882434039378126 36.0 35.0 37.0 32.0 37.0 8 34.804289005890745 36.0 35.0 37.0 32.0 37.0 9 36.43287683587 38.0 35.0 39.0 32.0 39.0 10 36.21367191965494 38.0 35.0 39.0 32.0 39.0 11 36.33147021258494 38.0 35.0 39.0 32.0 39.0 12 36.19141222990929 38.0 35.0 39.0 31.0 39.0 13 36.295385253292416 38.0 35.0 39.0 32.0 39.0 14 37.26254290617597 39.0 36.0 41.0 32.0 41.0 15 37.15716796251964 39.0 36.0 40.0 31.0 41.0 16 37.122329565580856 39.0 36.0 40.0 31.0 41.0 17 37.02981762354169 39.0 36.0 40.0 31.0 41.0 18 37.04417079295774 39.0 36.0 40.0 31.0 41.0 19 37.061893573484035 39.0 36.0 40.0 31.0 41.0 20 36.94074962485995 39.0 36.0 40.0 31.0 41.0 21 36.81434552482001 39.0 36.0 40.0 30.0 41.0 22 36.758067734996025 39.0 35.0 40.0 30.0 41.0 23 36.543938724863764 38.0 35.0 40.0 30.0 41.0 24 36.424893693437255 38.0 35.0 40.0 30.0 41.0 25 36.303009416768404 38.0 35.0 40.0 30.0 41.0 26 35.99788628681009 38.0 34.0 40.0 29.0 41.0 27 36.14075709331321 38.0 35.0 40.0 29.0 41.0 28 36.009916309287675 38.0 34.0 40.0 29.0 41.0 29 35.91283311018981 38.0 34.0 40.0 28.0 41.0 30 36.04710585986469 38.0 35.0 40.0 29.0 41.0 31 35.993101016290915 38.0 35.0 40.0 29.0 41.0 32 35.823968908688116 38.0 34.0 40.0 28.0 41.0 33 35.73681910472621 38.0 34.0 40.0 27.0 41.0 34 35.76265343576153 38.0 34.0 40.0 27.0 41.0 35 35.469765358460215 38.0 34.0 40.0 26.0 41.0 36 35.32955642143425 38.0 34.0 40.0 26.0 41.0 37 35.138287924021874 38.0 33.0 40.0 25.0 41.0 38 34.99613243329077 38.0 33.0 40.0 25.0 41.0 39 34.92748519387946 38.0 33.0 40.0 25.0 41.0 40 34.79579593015094 38.0 33.0 40.0 24.0 41.0 41 34.62770095115332 38.0 33.0 40.0 24.0 41.0 42 34.46631031810855 38.0 33.0 40.0 23.0 41.0 43 34.050105395023934 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 6.0 13 15.0 14 29.0 15 69.0 16 178.0 17 452.0 18 824.0 19 1747.0 20 3308.0 21 6424.0 22 11197.0 23 18533.0 24 29135.0 25 43844.0 26 63786.0 27 88073.0 28 118851.0 29 153598.0 30 193786.0 31 236459.0 32 280865.0 33 334245.0 34 400441.0 35 475858.0 36 577501.0 37 725362.0 38 949832.0 39 962793.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.38044265733908 19.368711372992347 12.329165736779649 25.92168023288892 2 17.70763224842894 23.51298075305612 33.643884772334594 25.135502226180346 3 20.727370982910102 25.19368218173248 29.515204027046373 24.56374280831105 4 14.96736162620638 16.38525804827122 33.701272085440515 34.946108240081884 5 14.1631289860007 37.86976109580528 33.26554772561819 14.701562192575828 6 34.21721186081974 34.04036452393102 16.23130927093981 15.511114344309435 7 27.434218163031755 31.469719385198335 22.151819915863648 18.944242535906263 8 27.639706313643686 32.6564460413939 21.417551182243823 18.28629646271859 9 28.145623565647437 13.45846985131613 19.510294928162818 38.885611654873614 10 17.364259540728874 26.56514737072574 32.73231073063491 23.338282357910476 11 35.62069980464006 22.005709491611462 20.868338038400182 21.505252665348294 12 21.72215486718571 26.297040466862875 29.270488882485118 22.71031578346629 13 30.411330348183167 19.01103587270726 25.311662606282344 25.26597117282723 14 22.89863001441024 21.396819178706174 25.384832311206218 30.319718495677368 15 26.666816975160174 26.501189932454533 22.73909751140216 24.092895580983136 16 23.9042642930607 25.64154277812018 26.47022403422243 23.983968894596696 17 24.35053960455597 26.30787324696114 25.870422688033724 23.471164460449167 18 24.650634034692725 23.48814462307474 28.026780041545035 23.8344413006875 19 24.540421506115763 26.36337583247273 27.041384566687913 22.05481809472359 20 24.087382312412796 24.247249486675944 27.228377726888176 24.436990474023084 21 24.307701683907226 25.964606224920573 26.974961129695153 22.75273096147705 22 24.547713816620938 25.361035423543203 25.1899303408204 24.90132041901546 23 22.437417796372973 25.191233797287506 26.806656716948968 25.56469168939055 24 23.040266412410457 27.228694783866665 26.204970643165932 23.52606816055695 25 24.284891195732836 25.015179102845003 25.087538551046084 25.612391150376073 26 23.7232599868985 25.81322913197021 26.646948071175064 23.816562809956224 27 25.11263889517621 25.231711404874186 25.235199031637528 24.420450668312075 28 23.180211839858746 26.17092224653188 26.81990265293904 23.82896326067033 29 23.673992855297133 25.439595097101343 27.132309462406994 23.75410258519453 30 23.481803483505022 26.709725352915243 27.20812130881825 22.600349854761483 31 24.90507225992754 25.57090952902419 25.126325188080838 24.39769302296743 32 22.200417704954877 26.32166522552527 26.25742595882874 25.220491110691107 33 22.846914498363898 25.553242409611897 26.963001035895605 24.636842056128597 34 23.431144824053636 25.620828388859113 27.06787643866806 23.8801503484192 35 23.596578109716862 26.18851890883784 27.49650224502762 22.718400736417678 36 23.542995480352772 26.018100782901747 26.485900740380885 23.95300299636459 37 23.211706166388332 25.87162045884134 27.237378622221854 23.679294752548476 38 23.39966811180063 25.126765544995404 27.574057904820553 23.89950843838341 39 23.588951127956623 23.981414824492227 27.257018540611387 25.17261550693976 40 23.540071510440068 24.88081740107338 27.871193136491446 23.707917951995107 41 22.058305721486935 25.0449472302695 28.418873838272408 24.47787320997116 42 23.523126576367666 25.457033230918057 27.95412115064205 23.065719042072228 43 22.385015323539914 23.84587296618957 28.41038375695962 25.358727953310893 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1414.0 1 1589.0 2 1764.0 3 4646.0 4 7528.0 5 7528.0 6 11287.5 7 15047.0 8 14637.0 9 14227.0 10 17832.5 11 21438.0 12 21438.0 13 31824.0 14 42210.0 15 56869.0 16 71528.0 17 64696.0 18 57864.0 19 57864.0 20 58744.5 21 59625.0 22 51672.0 23 43719.0 24 48573.5 25 53428.0 26 53428.0 27 59762.5 28 66097.0 29 72720.5 30 79344.0 31 89389.0 32 99434.0 33 99434.0 34 117040.0 35 134646.0 36 162654.0 37 190662.0 38 218397.5 39 246133.0 40 246133.0 41 268238.0 42 290343.0 43 312234.5 44 334126.0 45 378183.0 46 422240.0 47 422240.0 48 534956.5 49 647673.0 50 648904.0 51 650135.0 52 544349.0 53 438563.0 54 438563.0 55 411078.0 56 383593.0 57 368708.5 58 353824.0 59 329387.0 60 304950.0 61 304950.0 62 253520.5 63 202091.0 64 176690.5 65 151290.0 66 128093.5 67 104897.0 68 104897.0 69 87694.5 70 70492.0 71 60557.5 72 50623.0 73 37684.5 74 24746.0 75 24746.0 76 19286.0 77 13826.0 78 12138.0 79 10450.0 80 8545.5 81 6641.0 82 6641.0 83 5643.5 84 4646.0 85 4135.5 86 3625.0 87 2449.5 88 1274.0 89 1274.0 90 918.5 91 563.0 92 393.0 93 223.0 94 232.0 95 241.0 96 241.0 97 128.0 98 15.0 99 15.0 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5677213.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.86704501993893 #Duplication Level Percentage of deduplicated Percentage of total 1 82.17457289496053 36.04755688677487 2 8.971829416139771 7.871352898180314 3 3.013456269587098 3.9657426553078334 4 1.5469610022793674 2.714424317243154 5 0.887651837877869 1.9469331567110009 6 0.6109269815873466 1.6079736843112522 7 0.43172291915567096 1.3256886111518893 8 0.345708568909854 1.213217068491778 9 0.2458923931863497 0.9707915413769515 >10 1.557386080221665 12.593953232271845 >50 0.10672957546858212 3.217931769363428 >100 0.08086961674786299 7.3481346515136545 >500 0.01351139681735364 4.121827272137566 >1k 0.011807252998916669 10.092197591026538 >5k 5.274717834566332E-4 1.5580840455002982 >10k+ 4.4632227830945884E-4 3.404190618637575 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29541 0.5203433445248575 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 24726 0.4355306027799204 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 24214 0.4265120931696591 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 20260 0.35686524356229016 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 18231 0.3211258763763135 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 15860 0.2793624265991077 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13653 0.24048771818143866 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 13074 0.23028905204014716 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 11342 0.19978112499918535 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 10336 0.18206116275714862 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 10021 0.17651266563364804 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 9156 0.16127631638974968 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGT 8605 0.15157084999276935 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCTGT 7577 0.1334633736659167 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 7272 0.12809101930824157 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 7240 0.12752736245760024 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 7136 0.12569547769301592 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 6595 0.11616615406186098 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 6407 0.1128546700643432 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC 6305 0.11105801385292396 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.7614276582541468E-5 2 0.0 0.0 0.0 1.7614276582541468E-5 1.7614276582541468E-5 3 0.0 0.0 0.0 1.7614276582541468E-5 1.7614276582541468E-5 4 0.0 0.0 0.0 3.5228553165082935E-5 1.7614276582541468E-5 5 0.0 0.0 0.0 3.5228553165082935E-5 1.7614276582541468E-5 6 0.0 0.0 0.0 3.5228553165082935E-5 1.7614276582541468E-5 7 0.0 0.0 0.0 3.5228553165082935E-5 1.7614276582541468E-5 8 0.0 0.0 0.0 3.5228553165082935E-5 1.7614276582541468E-5 9 0.0 0.0 0.0 5.284282974762441E-5 1.7614276582541468E-5 10 0.0 0.0 0.0 7.045710633016587E-5 1.7614276582541468E-5 11 0.0 0.0 0.0 8.807138291270734E-5 3.5228553165082935E-5 12 0.0 0.0 0.0 1.2329993607779029E-4 3.5228553165082935E-5 13 0.0 0.0 0.0 1.7614276582541468E-4 3.5228553165082935E-5 14 0.0 0.0 0.0 4.051283613984538E-4 1.0568565949524882E-4 15 0.0 3.5228553165082935E-5 0.0 8.454852759619906E-4 1.2329993607779029E-4 16 0.0 3.5228553165082935E-5 0.0 0.0021665560196526008 1.5852848924287322E-4 17 0.0 3.5228553165082935E-5 0.0 0.0033995553804305034 1.5852848924287322E-4 18 0.0 5.284282974762441E-5 0.0 0.004350726315887743 1.7614276582541468E-4 19 0.0 5.284282974762441E-5 0.0 0.006429210952627636 1.7614276582541468E-4 20 0.0 5.284282974762441E-5 0.0 0.007908810185561119 2.1137131899049764E-4 21 0.0 5.284282974762441E-5 0.0 0.012928879011585438 2.289855955730391E-4 22 0.0 5.284282974762441E-5 0.0 0.019639918389533738 2.289855955730391E-4 23 0.0 5.284282974762441E-5 0.0 0.029486298999174418 3.5228553165082935E-4 24 0.0 5.284282974762441E-5 0.0 0.04451127692408229 3.5228553165082935E-4 25 0.0 5.284282974762441E-5 0.0 0.053635472193838775 3.5228553165082935E-4 26 0.0 5.284282974762441E-5 0.0 0.07052756343649604 3.5228553165082935E-4 27 0.0 5.284282974762441E-5 0.0 0.11695879650807535 3.5228553165082935E-4 28 0.0 5.284282974762441E-5 0.0 0.18951200175156366 3.5228553165082935E-4 29 0.0 5.284282974762441E-5 0.0 0.2585071231253786 3.5228553165082935E-4 30 0.0 5.284282974762441E-5 0.0 0.3657604532364736 3.5228553165082935E-4 31 0.0 5.284282974762441E-5 0.0 0.6480996925780308 3.5228553165082935E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1995 0.0 16.598997 5 CAAGACG 2060 0.0 16.254854 4 ACCGTCG 1480 0.0 14.75 8 TACCGTC 1485 0.0 13.952862 7 ATACCGT 1530 0.0 13.905229 6 ACGAACG 1030 0.0 13.830096 15 TACTTAC 1320 0.0 13.734849 31 CGCAAGA 2410 0.0 13.6639 2 CGAACGA 1030 0.0 13.650485 16 TGTTACG 485 0.0 13.350515 24 CGGACCA 2445 0.0 13.316973 9 AACGAAC 1080 0.0 13.1898155 14 CGTCGTA 1575 0.0 13.155556 10 CCGTCGT 1590 0.0 13.1477995 9 TTAGAGT 1170 0.0 13.123932 4 GCAAGAC 2730 0.0 13.078755 3 ACGGACC 2435 0.0 13.067762 8 GTCCTAT 1530 0.0 13.058824 1 TCTTATA 6265 0.0 13.051876 37 GCGCAAG 2475 0.0 13.006061 1 >>END_MODULE