##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727172.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5361296 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.137263452717402 31.0 31.0 33.0 30.0 34.0 2 31.26226998098967 31.0 31.0 34.0 30.0 34.0 3 31.316722113459132 31.0 31.0 34.0 28.0 34.0 4 35.151464869688226 35.0 35.0 37.0 33.0 37.0 5 35.01623170964633 35.0 35.0 37.0 32.0 37.0 6 35.05495611508859 36.0 35.0 37.0 32.0 37.0 7 34.87363242022078 36.0 35.0 37.0 32.0 37.0 8 34.808919708965895 36.0 35.0 37.0 32.0 37.0 9 36.415845161319204 38.0 35.0 39.0 32.0 39.0 10 36.21117282090002 38.0 35.0 39.0 32.0 39.0 11 36.325945629564195 38.0 35.0 39.0 32.0 39.0 12 36.20490493343401 38.0 35.0 39.0 32.0 39.0 13 36.30199265252282 38.0 35.0 39.0 32.0 39.0 14 37.24915524156846 39.0 36.0 41.0 32.0 41.0 15 37.14553067019616 39.0 36.0 41.0 31.0 41.0 16 37.10439621315443 39.0 36.0 40.0 31.0 41.0 17 37.05499341950156 39.0 36.0 40.0 31.0 41.0 18 37.06944104559793 39.0 36.0 40.0 31.0 41.0 19 37.1044366884425 39.0 36.0 40.0 31.0 41.0 20 36.999805457486396 39.0 36.0 40.0 31.0 41.0 21 36.88398085089874 39.0 36.0 40.0 31.0 41.0 22 36.844584779501076 39.0 35.0 40.0 31.0 41.0 23 36.629578930169124 38.0 35.0 40.0 30.0 41.0 24 36.52062989993464 38.0 35.0 40.0 30.0 41.0 25 36.412084316926354 38.0 35.0 40.0 30.0 41.0 26 36.09599395370075 38.0 35.0 40.0 29.0 41.0 27 36.207225640964424 38.0 35.0 40.0 30.0 41.0 28 36.08215979867554 38.0 35.0 40.0 29.0 41.0 29 35.97675506071666 38.0 34.0 40.0 29.0 41.0 30 36.0755761293538 38.0 35.0 40.0 29.0 41.0 31 35.984730371163984 38.0 35.0 40.0 29.0 41.0 32 35.781368348250126 38.0 34.0 40.0 28.0 41.0 33 35.69228056052119 38.0 34.0 40.0 27.0 41.0 34 35.69208079538977 38.0 34.0 40.0 27.0 41.0 35 35.40903747899762 38.0 34.0 40.0 26.0 41.0 36 35.22977280120329 38.0 34.0 40.0 25.0 41.0 37 35.01382277717925 38.0 33.0 40.0 25.0 41.0 38 34.848411839226934 38.0 33.0 40.0 24.0 41.0 39 34.754387558530624 38.0 33.0 40.0 24.0 41.0 40 34.61446728552201 38.0 33.0 40.0 24.0 41.0 41 34.42830763307976 38.0 33.0 40.0 23.0 41.0 42 34.256321046254484 38.0 33.0 40.0 23.0 41.0 43 33.81614147027137 37.0 32.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 9.0 13 8.0 14 18.0 15 67.0 16 195.0 17 410.0 18 788.0 19 1623.0 20 3244.0 21 5826.0 22 10381.0 23 17466.0 24 27411.0 25 41139.0 26 59710.0 27 83225.0 28 113516.0 29 147961.0 30 184632.0 31 224744.0 32 267322.0 33 316906.0 34 379661.0 35 452136.0 36 548362.0 37 694573.0 38 885879.0 39 894081.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.77941378353294 19.404356707781105 12.812051414434123 25.004178094251838 2 16.986228702910637 24.58642462568752 33.7562223760822 24.67112429531964 3 21.164546781226033 26.167348342639542 29.611608834878734 23.0564960412557 4 15.365501177327273 16.876460467767494 32.85019144624732 34.90784690865791 5 13.926725925970137 38.62457883317765 32.82310844243631 14.625586798415904 6 33.4988592310516 33.188952820362836 16.864000793837906 16.44818715474766 7 26.424170573682183 31.97795831455678 22.56997188739439 19.027899224366646 8 27.826835153291295 32.57505274843993 22.03985752698601 17.558254571282763 9 28.556509470844365 13.6973037862487 20.205730107048744 37.54045663585819 10 17.82141855252909 27.337028211089258 32.54668274238169 22.29487049399996 11 34.15006371593734 22.804411470659332 20.90444176184266 22.141083051560667 12 21.625405498968906 27.266821305893203 29.438646924176542 21.66912627096135 13 30.330334307227208 19.336798415905406 25.83302619366661 24.499841083200778 14 22.702346596793014 22.106091512201527 26.403914277443363 28.787647613562093 15 26.991570694846917 26.137952465224828 23.775892993037502 23.09458384689075 16 22.549118720548165 25.976816053431858 28.191635007654863 23.28243021836511 17 23.88474727006306 27.001400407662622 26.720293003781176 22.39355931849314 18 23.869396504128854 23.696621115491478 29.542782192962296 22.891200187417372 19 23.730120478332104 27.255163676842315 28.429264118228133 20.58545172659745 20 23.22910356003474 24.6348271015068 28.883874346799733 23.252194991658733 21 22.93210447623112 26.776212318812465 28.641171836063517 21.650511368892893 22 23.657358220848092 26.157835717334017 25.82700153097311 24.35780453084478 23 21.18041980894172 26.166415732315468 28.13088477114489 24.522279687597926 24 21.835205517471895 28.571393931616534 27.22449944938686 22.368901101524706 25 23.304682300697444 25.790685684953786 25.75457501320576 25.150057001143004 26 22.635814176273797 26.501409360721734 27.8955871863818 22.96718927662267 27 23.996623204538604 26.12116547939155 26.177644360617286 23.704566955452563 28 21.95144606826409 27.245986791253458 27.989202610712038 22.813364529770414 29 22.7555613418845 25.967993559766146 28.531403600920374 22.745041497428982 30 22.473316153407684 27.73704343128975 28.47192171445113 21.317718700851433 31 24.266408719085835 26.216776689815298 26.10986224226381 23.40695234883506 32 20.630459500837112 27.493128527132242 27.672973102026077 24.203438870004565 33 21.699585324145502 26.558802200065056 28.33798021970807 23.403632256081366 34 21.830934162187653 26.643930870446255 28.36648079121168 23.15865417615442 35 21.904666334408695 27.7110982120741 28.78455134728618 21.59968410623103 36 22.590563923349876 26.83438855082801 27.56436130368478 23.010686222137334 37 21.694884968112188 27.14759640206398 28.507379558972307 22.650139070851523 38 22.480422644077102 26.229758625526365 28.549552197826795 22.740266532569738 39 22.33670739313778 24.76162480116748 28.47531641603075 24.426351389663992 40 22.28953596294627 26.014903859066912 28.885515740970092 22.81004443701672 41 20.789973170666197 26.093485604973125 29.275346856431728 23.841194367928946 42 22.26277004664544 26.775932535715246 28.78270477884452 22.1785926387948 43 21.065932565558775 24.9634603275029 29.25066998725681 24.71993711968151 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3051.0 1 3295.5 2 3540.0 3 7651.5 4 11763.0 5 11763.0 6 17267.5 7 22772.0 8 22510.0 9 22248.0 10 27190.0 11 32132.0 12 32132.0 13 48308.5 14 64485.0 15 84879.0 16 105273.0 17 93213.5 18 81154.0 19 81154.0 20 80320.0 21 79486.0 22 66362.0 23 53238.0 24 57498.0 25 61758.0 26 61758.0 27 66447.0 28 71136.0 29 75267.0 30 79398.0 31 86406.0 32 93414.0 33 93414.0 34 108882.0 35 124350.0 36 148290.5 37 172231.0 38 197527.5 39 222824.0 40 222824.0 41 241288.5 42 259753.0 43 282452.5 44 305152.0 45 352649.5 46 400147.0 47 400147.0 48 533783.5 49 667420.0 50 666249.0 51 665078.0 52 526975.5 53 388873.0 54 388873.0 55 356250.0 56 323627.0 57 309406.5 58 295186.0 59 271295.5 60 247405.0 61 247405.0 62 204988.0 63 162571.0 64 140244.0 65 117917.0 66 99538.0 67 81159.0 68 81159.0 69 67624.0 70 54089.0 71 46452.5 72 38816.0 73 28713.0 74 18610.0 75 18610.0 76 14619.0 77 10628.0 78 9348.0 79 8068.0 80 6472.5 81 4877.0 82 4877.0 83 4161.5 84 3446.0 85 3021.0 86 2596.0 87 1717.5 88 839.0 89 839.0 90 615.5 91 392.0 92 294.5 93 197.0 94 184.5 95 172.0 96 172.0 97 92.0 98 12.0 99 12.5 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5361296.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.762077577095205 #Duplication Level Percentage of deduplicated Percentage of total 1 81.75965918451672 34.14453229540652 2 9.177222135427181 7.6651972552389065 3 3.110890676467085 3.8975177329344177 4 1.5729631978143273 2.6276084437215075 5 0.9243819586044049 1.9302055533052185 6 0.6359456158262777 1.5935046085770361 7 0.4613379628805262 1.3486502256552926 8 0.34683522716797116 1.1587647730766604 9 0.2608128028916139 0.9802876056713299 >10 1.5103763895199596 11.493981356853157 >50 0.11668808736995649 3.3500055342464212 >100 0.09455995671479413 8.389358573838637 >500 0.015504720226586029 4.546844618901138 >1k 0.011230691097362891 8.63014053099188 >5k 0.001000304470210443 2.8540348614049535 >10k+ 5.910890051243528E-4 5.3893660301768875 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 41673 0.7772934007001292 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 33877 0.631880798970995 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 31227 0.5824524517952375 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 27336 0.5098767163760404 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 24346 0.4541066189966008 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 21862 0.40777453809675873 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20373 0.3800014026459274 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 16975 0.3166212050220693 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 15955 0.29759595441102304 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 13704 0.25560983762135125 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 12921 0.24100515994640104 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 12819 0.2391026348852964 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGT 10754 0.20058582850116835 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCTGT 9832 0.18338849412530106 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 9572 0.1785389204401324 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 9345 0.17430486956885052 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 9170 0.17104073343460238 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 8565 0.15975614851334452 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8279 0.15442161745965902 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC 7887 0.14710995251894318 No Hit GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGC 6835 0.12748783130049152 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCT 6603 0.12316051939680256 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCT 6426 0.1198590788495916 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT 6386 0.11911299059033488 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGTCT 6252 0.11661359492182487 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTC 6113 0.11402093822090778 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 6006 0.11202515212739607 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 5994 0.11180132564961906 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5613 0.10469483498019881 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 5589 0.1042471820246448 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 3.730441296283585E-5 5 0.0 0.0 0.0 0.0 3.730441296283585E-5 6 1.8652206481417925E-5 0.0 0.0 0.0 9.326103240708963E-5 7 3.730441296283585E-5 0.0 0.0 0.0 9.326103240708963E-5 8 3.730441296283585E-5 0.0 0.0 0.0 1.3056544536992548E-4 9 5.5956619444253776E-5 0.0 0.0 1.8652206481417925E-5 1.6786985833276133E-4 10 5.5956619444253776E-5 0.0 0.0 1.8652206481417925E-5 1.6786985833276133E-4 11 5.5956619444253776E-5 0.0 0.0 1.492176518513434E-4 1.6786985833276133E-4 12 5.5956619444253776E-5 0.0 0.0 4.290007490726123E-4 1.8652206481417925E-4 13 5.5956619444253776E-5 0.0 0.0 6.155228138867916E-4 1.8652206481417925E-4 14 5.5956619444253776E-5 1.8652206481417925E-5 0.0 0.0012310456277735832 2.4247868425843303E-4 15 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.0024620912555471663 2.797830972212689E-4 16 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.005632966357388213 2.984353037026868E-4 17 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.00899036352404344 2.984353037026868E-4 18 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.010930192998110905 3.1708751018410473E-4 19 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.015499983586058296 3.1708751018410473E-4 20 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.01978999107678442 3.1708751018410473E-4 21 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.02889226783971637 3.1708751018410473E-4 22 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.042116682235041676 3.1708751018410473E-4 23 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.05979897397942587 3.730441296283585E-4 24 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.08912024256821485 3.730441296283585E-4 25 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.10646679459593351 3.730441296283585E-4 26 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.13595593304305525 3.730441296283585E-4 27 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.2044841396557847 3.9169633610977643E-4 28 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.3196055580590962 3.9169633610977643E-4 29 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.4254008732216986 3.9169633610977643E-4 30 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.5892978115739179 3.9169633610977643E-4 31 7.46088259256717E-5 1.8652206481417925E-5 0.0 0.9552727549458191 3.9169633610977643E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTAACG 45 0.0038276096 20.555555 3 AAGACGG 1520 0.0 16.1875 5 CGTTACG 850 0.0 15.452942 24 CAAGACG 1640 0.0 15.115854 4 GTTACGG 1475 0.0 14.423729 25 TACGGAT 1815 0.0 14.371901 27 ACGGATG 1880 0.0 14.268618 28 TCGTTAC 1085 0.0 14.152074 23 TATACCG 170 2.442539E-8 14.1470585 5 GCGCAAG 1820 0.0 13.824177 1 GTAATAC 295 0.0 13.79661 3 CGCAAGA 1870 0.0 13.751336 2 TACGCAG 135 6.5772547E-6 13.703703 5 GACGGAC 1805 0.0 13.631578 7 TACCGTC 1170 0.0 13.59829 7 AGTACTC 2075 0.0 13.551807 5 ACCGTCG 1100 0.0 13.454545 8 ACGGACC 1810 0.0 13.389503 8 CGGATGG 2025 0.0 13.338272 29 TTACGGA 1970 0.0 13.2411175 26 >>END_MODULE