##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727170.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9385536 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14878628135889 31.0 31.0 33.0 30.0 34.0 2 31.26639629318986 31.0 31.0 34.0 30.0 34.0 3 31.32476216595408 31.0 31.0 34.0 28.0 34.0 4 35.156028702036835 35.0 35.0 37.0 33.0 37.0 5 35.01565078435584 35.0 35.0 37.0 32.0 37.0 6 35.05756666428002 36.0 35.0 37.0 32.0 37.0 7 34.86854325634679 36.0 35.0 37.0 32.0 37.0 8 34.80603750281284 36.0 35.0 37.0 32.0 37.0 9 36.42923025387149 38.0 35.0 39.0 32.0 39.0 10 36.21718056379518 38.0 35.0 39.0 32.0 39.0 11 36.33036866514603 38.0 35.0 39.0 32.0 39.0 12 36.2077209016086 38.0 35.0 39.0 32.0 39.0 13 36.30198222030154 38.0 35.0 39.0 32.0 39.0 14 37.26441153707151 39.0 36.0 41.0 32.0 41.0 15 37.15233589216428 39.0 36.0 41.0 31.0 41.0 16 37.09880831526298 39.0 36.0 40.0 31.0 41.0 17 37.04232214334908 39.0 36.0 40.0 31.0 41.0 18 37.03905051347094 39.0 36.0 40.0 31.0 41.0 19 37.055651802944446 39.0 36.0 40.0 31.0 41.0 20 36.96292742364421 39.0 36.0 40.0 31.0 41.0 21 36.83275169366992 39.0 36.0 40.0 30.0 41.0 22 36.80023900606209 39.0 35.0 40.0 30.0 41.0 23 36.58614798345028 38.0 35.0 40.0 30.0 41.0 24 36.46455460828236 38.0 35.0 40.0 30.0 41.0 25 36.35571074470334 38.0 35.0 40.0 30.0 41.0 26 36.02760300530518 38.0 34.0 40.0 29.0 41.0 27 36.14955789418953 38.0 35.0 40.0 29.0 41.0 28 36.01460747686653 38.0 35.0 40.0 29.0 41.0 29 35.913243313967364 38.0 34.0 40.0 28.0 41.0 30 36.015327840626256 38.0 35.0 40.0 29.0 41.0 31 35.941011786647024 38.0 35.0 40.0 29.0 41.0 32 35.72141196837347 38.0 34.0 40.0 27.0 41.0 33 35.646824326282484 38.0 34.0 40.0 27.0 41.0 34 35.646432233598595 38.0 34.0 40.0 27.0 41.0 35 35.35764116188996 38.0 34.0 40.0 26.0 41.0 36 35.21011138841724 38.0 34.0 40.0 25.0 41.0 37 34.99143256176312 38.0 33.0 40.0 25.0 41.0 38 34.830621714092835 38.0 33.0 40.0 24.0 41.0 39 34.761077257601485 38.0 33.0 40.0 24.0 41.0 40 34.60752108350551 38.0 33.0 40.0 24.0 41.0 41 34.43415666404135 38.0 33.0 40.0 23.0 41.0 42 34.25387084978418 38.0 33.0 40.0 23.0 41.0 43 33.81352157191662 37.0 32.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 10.0 13 18.0 14 30.0 15 118.0 16 406.0 17 810.0 18 1568.0 19 3096.0 20 6232.0 21 11255.0 22 19477.0 23 31837.0 24 49769.0 25 75151.0 26 107746.0 27 149309.0 28 200233.0 29 259686.0 30 323655.0 31 392949.0 32 464862.0 33 554230.0 34 662754.0 35 787629.0 36 957173.0 37 1208088.0 38 1568219.0 39 1549222.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.89979815750534 19.216462437520885 12.395903654303813 25.48783575066997 2 16.97351115588923 24.51022509529557 32.98784427442396 25.528419474391235 3 21.217999696554358 26.08934641559097 29.10654223690581 23.586111650948865 4 15.443252255385309 17.082125091204166 32.59956597044644 34.875056682964086 5 14.088827745160213 37.77104472243247 33.247243417957165 14.89288411445015 6 33.84489708419423 32.97137211982352 16.777624634330955 16.40610616165129 7 26.520616403794094 31.205324874359867 22.926937790233822 19.347120931612217 8 27.706696772565785 32.08788501796807 22.32016370721928 17.885254502246863 9 27.920579069751582 13.79884963416048 20.09649741900729 38.18407387708065 10 17.95354042646046 26.678827932682804 32.578160693219864 22.789470947636875 11 34.39828050310606 22.405582376968137 20.80010134743503 22.396035772490777 12 21.804753612366945 27.110545417970798 29.120862143621846 21.963838826040412 13 30.672707451124793 18.791297588118567 25.39544891202804 25.140546048728595 14 22.918371417466194 21.887743012226473 25.71055078793582 29.48333478237151 15 27.434948840428508 25.465087982188763 23.320074633990004 23.779888543392726 16 23.321481053399616 25.327706377131793 27.90719677597529 23.443615793493308 17 24.62315418107181 26.778555854455195 26.41162955424176 22.186660410231234 18 25.094017006593976 22.51823444073945 29.035358236333014 23.352390316333558 19 24.19916134784417 27.493837325859705 27.387279746196704 20.91972158009942 20 23.811788692728896 24.195059291232806 28.257086222885942 23.73606579315236 21 23.528352562922354 26.61835189806954 27.36142080750636 22.49187473150175 22 23.93927208845611 26.191386405635225 24.858793360336588 25.01054814557208 23 21.380537030596866 25.5755025605357 27.047746660393184 25.99621374847425 24 22.355484012847 28.884189459184856 26.132135660659124 22.628190867309016 25 24.004148511070653 25.28125191784465 24.545833077620713 26.168766493463984 26 23.341106996979182 26.05068053651917 27.024370265054653 23.58384220144699 27 24.954674938117545 25.25521184938186 25.14245323868557 24.647659973815028 28 22.70888950828168 26.28960136107304 27.58429566515967 23.417213465485613 29 23.454398342300323 25.093814567436535 27.82005204604191 23.631735044221237 30 22.563378372849456 27.42056500555749 28.27460253735109 21.741454084241965 31 25.276137665446065 25.454134958301793 24.686997098514137 24.582730277737998 32 20.82720688514753 26.80896434684178 26.954496791658993 25.409331976351694 33 22.36116296394793 25.98272490777298 27.588291174846063 24.067820953433028 34 22.427509734127067 25.8916166322307 27.498408188940942 24.182465444701293 35 22.608362484572005 27.081042574446467 28.396705313367292 21.913889627614235 36 23.55567119448479 26.16306623297806 26.609465884527 23.671796688010147 37 22.643331185347325 26.306915236380746 27.611028288634763 23.438725289637162 38 23.139424322702506 25.548951066833048 28.0104833650417 23.301141245422745 39 23.460791157798553 23.473832501414943 27.45511817332542 25.61025816746108 40 22.939467708610355 25.337242326916652 28.24943615367306 23.473853810799937 41 21.470867513586864 25.153885723734902 28.709452502233223 24.665794260445008 42 23.438703980252168 25.901536150945454 28.103914363548338 22.55584550525404 43 22.200064013392524 23.692402863299442 28.812515342757195 25.29501778055084 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2668.0 1 2963.0 2 3258.0 3 10287.0 4 17316.0 5 17316.0 6 25677.5 7 34039.0 8 33691.5 9 33344.0 10 40359.5 11 47375.0 12 47375.0 13 68965.5 14 90556.0 15 119429.0 16 148302.0 17 133636.0 18 118970.0 19 118970.0 20 119007.0 21 119044.0 22 99743.5 23 80443.0 24 85030.0 25 89617.0 26 89617.0 27 96852.0 28 104087.0 29 110704.0 30 117321.0 31 130008.5 32 142696.0 33 142696.0 34 170735.0 35 198774.0 36 244667.5 37 290561.0 38 334907.5 39 379254.0 40 379254.0 41 410473.5 42 441693.0 43 480771.0 44 519849.0 45 604845.0 46 689841.0 47 689841.0 48 974588.5 49 1259336.0 50 1248956.0 51 1238576.0 52 949297.5 53 660019.0 54 660019.0 55 609761.0 56 559503.0 57 542380.0 58 525257.0 59 492207.5 60 459158.0 61 459158.0 62 380382.0 63 301606.0 64 265390.0 65 229174.0 66 196681.0 67 164188.0 68 164188.0 69 139724.5 70 115261.0 71 100932.0 72 86603.0 73 64560.5 74 42518.0 75 42518.0 76 33595.5 77 24673.0 78 21759.5 79 18846.0 80 15718.5 81 12591.0 82 12591.0 83 10685.5 84 8780.0 85 7530.5 86 6281.0 87 4282.0 88 2283.0 89 2283.0 90 1647.0 91 1011.0 92 724.0 93 437.0 94 412.0 95 387.0 96 387.0 97 202.5 98 18.0 99 20.0 100 22.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 9385536.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.81695399728903 #Duplication Level Percentage of deduplicated Percentage of total 1 79.32126751836866 27.61724922193698 2 10.249038150672906 7.136805796168777 3 3.6204748002559537 3.7816171370656715 4 1.8037068615601788 2.5119831529414127 5 1.0261914971185992 1.7864431073793718 6 0.6833771181276539 1.4275865810790287 7 0.49428875597725996 1.204674021476624 8 0.37598660943117396 1.0472566787329491 9 0.28179871111511606 0.8830235485251303 >10 1.8569082123593261 12.1778512063005 >50 0.1463624310020208 3.5143704296747984 >100 0.10309031240500058 7.3580379729306795 >500 0.017761126917408904 4.327268221632144 >1k 0.016860230845752344 11.798372255126962 >5k 0.0017698584843639973 4.128666509511674 >10k+ 0.0011178053585456824 9.298794159517229 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 73976 0.7881915321618286 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 72227 0.7695564749844868 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 55025 0.5862744546502192 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 46624 0.4967643829824956 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 39513 0.42099886463596753 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 36185 0.3855400480057825 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 33487 0.35679368764873953 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 33243 0.3541939426794591 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 28926 0.3081976351696909 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 28618 0.30491598988059926 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26917 0.2867923579431159 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 26524 0.2826050637917749 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGT 23293 0.24817975233380382 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 23020 0.24527102128210895 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 21390 0.22790387251191618 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCTGT 21368 0.2276694692769811 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 21284 0.2267744751072288 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC 18700 0.1992427496948496 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 18652 0.19873132445499117 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT 14722 0.15685838294158158 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCT 14289 0.15224490109035863 No Hit GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGC 14149 0.15075324414077151 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 14136 0.15061473313830984 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTC 13868 0.14775927554910023 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCT 13423 0.14301793738791263 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGTCT 13385 0.1426130590730247 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 13176 0.1403862283411411 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12337 0.1314469413361155 No Hit CCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCA 11962 0.12745143164972145 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 11765 0.12535245722780244 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT 11632 0.12393538312569469 No Hit GCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 11240 0.11975874366685077 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATC 10691 0.11390931748596991 No Hit CATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGT 10204 0.10872048223990616 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGCTGTCT 10158 0.10823036638504184 No Hit GTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG 10037 0.10694114859289869 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0654692497050781E-5 2 0.0 0.0 0.0 0.0 1.0654692497050781E-5 3 0.0 0.0 0.0 0.0 1.0654692497050781E-5 4 0.0 0.0 0.0 0.0 3.1964077491152344E-5 5 0.0 0.0 0.0 0.0 3.1964077491152344E-5 6 0.0 0.0 0.0 0.0 4.2618769988203125E-5 7 0.0 0.0 0.0 0.0 4.2618769988203125E-5 8 2.1309384994101563E-5 0.0 0.0 0.0 5.327346248525391E-5 9 2.1309384994101563E-5 0.0 0.0 2.1309384994101563E-5 1.0654692497050781E-4 10 2.1309384994101563E-5 0.0 0.0 5.327346248525391E-5 1.0654692497050781E-4 11 2.1309384994101563E-5 0.0 0.0 1.2785630996460938E-4 1.0654692497050781E-4 12 3.1964077491152344E-5 1.0654692497050781E-5 0.0 2.9833138991742185E-4 1.0654692497050781E-4 13 3.1964077491152344E-5 2.1309384994101563E-5 0.0 4.474970848761328E-4 1.0654692497050781E-4 14 3.1964077491152344E-5 3.1964077491152344E-5 0.0 6.712456273141992E-4 1.2785630996460938E-4 15 5.327346248525391E-5 3.1964077491152344E-5 0.0 0.0012252896371608398 1.4916569495871093E-4 16 6.392815498230469E-5 3.1964077491152344E-5 0.0 0.003015277976665371 1.8112977244986328E-4 17 6.392815498230469E-5 3.1964077491152344E-5 0.0 0.005060978936099121 1.8112977244986328E-4 18 6.392815498230469E-5 3.1964077491152344E-5 0.0 0.006595254655674433 2.0243915744396485E-4 19 6.392815498230469E-5 3.1964077491152344E-5 0.0 0.010121957872198242 2.0243915744396485E-4 20 6.392815498230469E-5 3.1964077491152344E-5 0.0 0.013115926463869512 2.0243915744396485E-4 21 6.392815498230469E-5 3.1964077491152344E-5 0.0 0.020542247134313907 2.1309384994101563E-4 22 6.392815498230469E-5 3.1964077491152344E-5 0.0 0.0306961690840033 2.237485424380664E-4 23 6.392815498230469E-5 3.1964077491152344E-5 0.0 0.04419566447776664 2.876766974203711E-4 24 7.458284747935546E-5 3.1964077491152344E-5 0.0 0.06588861840176204 2.9833138991742185E-4 25 7.458284747935546E-5 3.1964077491152344E-5 0.0 0.0803790001977511 2.9833138991742185E-4 26 7.458284747935546E-5 3.1964077491152344E-5 0.0 0.10571585895573785 3.089860824144727E-4 27 7.458284747935546E-5 3.1964077491152344E-5 0.0 0.16341101882726783 3.3029546740857423E-4 28 7.458284747935546E-5 3.1964077491152344E-5 0.0 0.2657706496464347 3.3029546740857423E-4 29 7.458284747935546E-5 4.2618769988203125E-5 0.0 0.3586156400657352 3.40950159905625E-4 30 7.458284747935546E-5 4.2618769988203125E-5 0.0 0.5036473143355904 3.40950159905625E-4 31 8.523753997640625E-5 4.2618769988203125E-5 0.0 0.8414010664921002 3.40950159905625E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 3065 0.0 17.081566 5 CAAGACG 3155 0.0 16.828842 4 TCTATAC 645 0.0 15.2015505 3 TAATACG 165 1.6496415E-8 14.575759 4 AAAAAGT 3650 0.0 14.090412 1 TATAACG 355 0.0 14.070422 2 TACCGTC 2540 0.0 13.984252 7 CGCAAGA 3725 0.0 13.955705 2 AGTACTC 3930 0.0 13.933843 5 AAAAGTA 3745 0.0 13.881174 2 ACCGTCG 2535 0.0 13.865878 8 AAGTACT 4140 0.0 13.718599 4 CGAACGT 1360 0.0 13.6029415 4 GACGGAC 3785 0.0 13.587847 7 ATACCGT 2630 0.0 13.576045 6 CTTATAC 8675 0.0 13.541786 37 TGGGCTG 6700 0.0 13.419403 36 GCGCAAG 3825 0.0 13.397387 1 CGGTCCA 2200 0.0 13.286365 10 TATCACG 350 0.0 13.214285 2 >>END_MODULE