##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727168.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2671488 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.986012664103303 31.0 31.0 33.0 30.0 34.0 2 31.23442703092808 31.0 31.0 34.0 30.0 34.0 3 31.363728379090603 31.0 31.0 34.0 30.0 34.0 4 35.116926971036364 35.0 35.0 37.0 32.0 37.0 5 34.868316458842415 35.0 35.0 37.0 32.0 37.0 6 35.01436689964544 35.0 35.0 37.0 32.0 37.0 7 34.934013179172055 35.0 35.0 37.0 32.0 37.0 8 34.91088786474055 35.0 35.0 37.0 32.0 37.0 9 36.37802827487902 38.0 35.0 39.0 32.0 39.0 10 36.06300907958411 38.0 35.0 39.0 31.0 39.0 11 36.21122273429639 38.0 35.0 39.0 32.0 39.0 12 35.9970020453021 37.0 35.0 39.0 30.0 39.0 13 36.03692511439318 37.0 35.0 39.0 31.0 39.0 14 36.88654450253941 38.0 36.0 40.0 31.0 41.0 15 36.83425678872598 38.0 36.0 40.0 31.0 41.0 16 36.72005451643429 38.0 36.0 40.0 31.0 41.0 17 37.01403599791577 39.0 36.0 40.0 31.0 41.0 18 37.02980997855877 39.0 36.0 40.0 31.0 41.0 19 37.085609592856116 39.0 36.0 40.0 31.0 41.0 20 37.04605822672608 39.0 36.0 40.0 31.0 41.0 21 36.978562134660535 39.0 36.0 40.0 31.0 41.0 22 36.918275133558524 39.0 36.0 40.0 31.0 41.0 23 36.752120166738536 39.0 36.0 40.0 30.0 41.0 24 36.61431344628911 39.0 36.0 40.0 30.0 41.0 25 36.53678848641656 39.0 35.0 40.0 30.0 41.0 26 36.194112045421875 38.0 35.0 40.0 29.0 41.0 27 35.968826361937616 38.0 35.0 40.0 27.0 41.0 28 35.72216382779934 38.0 34.0 40.0 27.0 41.0 29 35.51907738309137 38.0 34.0 40.0 27.0 41.0 30 35.359419918786834 38.0 34.0 40.0 26.0 41.0 31 35.17549695151167 38.0 34.0 40.0 25.0 41.0 32 34.983713196540656 38.0 34.0 40.0 25.0 41.0 33 34.80100715406545 38.0 33.0 40.0 25.0 41.0 34 34.66134191881079 38.0 33.0 40.0 24.0 41.0 35 34.47331187712616 38.0 33.0 40.0 24.0 41.0 36 34.3493573618897 38.0 33.0 40.0 24.0 41.0 37 34.248719440252025 38.0 33.0 40.0 23.0 41.0 38 34.126439272794784 38.0 33.0 40.0 23.0 41.0 39 33.94906134708447 38.0 32.0 40.0 22.0 41.0 40 33.83674491519333 37.0 32.0 40.0 21.0 41.0 41 33.57683059029275 37.0 32.0 40.0 19.0 41.0 42 33.36228648603325 37.0 31.0 40.0 18.0 41.0 43 33.07336772615112 37.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 18.0 11 31.0 12 29.0 13 58.0 14 116.0 15 204.0 16 308.0 17 532.0 18 999.0 19 1779.0 20 3420.0 21 5736.0 22 9395.0 23 14338.0 24 20258.0 25 27802.0 26 36577.0 27 47532.0 28 59703.0 29 73281.0 30 89939.0 31 107568.0 32 129423.0 33 155997.0 34 188918.0 35 231708.0 36 294270.0 37 391480.0 38 543840.0 39 236225.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.05141104882373 24.468049266925398 14.916705596281924 23.563834087968953 2 21.687276903358725 25.548682981170046 30.632216951751236 22.131823163719993 3 21.68929824876623 26.284302980211777 29.43015278376695 22.596245987255042 4 17.178366513343875 18.533641176752433 32.97372101240956 31.314271297494127 5 13.367194612141247 40.24554854822481 33.496687988117486 12.89056885151646 6 33.823846485554114 38.94574858655551 14.137439509367065 13.092965418523308 7 28.235425350965453 32.464828589909445 21.09412432322361 18.205621735901488 8 27.223143057352306 36.324213322313256 18.896248083465096 17.55639553686934 9 27.987286486033252 13.667514134444925 17.78746526280485 40.55773411671698 10 16.12846473575775 28.39937892290738 33.322178501269704 22.149977840065162 11 37.84385331320972 22.311123987830005 20.077350150927124 19.767672548033154 12 21.10879779358919 26.650465957548754 29.35098342197307 22.889752826888984 13 30.46455757989555 20.246319654065452 24.49144446840113 24.79767829763787 14 22.516103385079774 21.109134684490442 24.54617052369316 31.828591406736624 15 25.440428704901535 28.935409779119354 21.211549518470605 24.412611997508506 16 24.86344688802645 27.017152987398784 23.812497005414208 24.30690311916056 17 24.195654257103158 27.48374688563078 24.299790977911936 24.020807879354127 18 24.73947103636625 25.520945630300417 25.774811640553878 23.964771692779454 19 25.320158653155094 26.211160222318046 25.200861841790044 23.267819282736813 20 24.626575152124957 25.06019117435676 25.341944264769296 24.97128940874898 21 25.1419059340712 26.089018554453546 25.21557274447798 23.55350276699727 22 25.09631336543529 25.608799290882082 24.64618968904221 24.64869765464041 23 23.957322660629583 25.4009376048105 25.64989998083465 24.991839753725266 24 24.2827592712376 26.055554058262658 25.19086741171961 24.470819258780125 25 24.88744100665996 25.255587897082076 24.833575894782236 25.023395201475733 26 24.776753629437977 25.858023693162764 25.098596737099328 24.26662594029994 27 25.48579667960328 25.719449235781706 24.439263811029658 24.35549027358536 28 24.607110344497148 26.061618094485173 25.14134444923578 24.1899271117819 29 24.85940419721144 25.944791816395956 25.37754240333477 23.818261583057833 30 25.09627593311293 25.99472653442576 24.94497448612908 23.96402304633223 31 25.56350618082507 25.473556310191174 24.888975731876766 24.07396177710699 32 24.399585549326815 25.951716796032777 24.78229361314743 24.86640404149298 33 24.544897824732885 25.335842796224426 25.127045302093816 24.992214076948876 34 24.953097300081453 25.626916534904893 25.57200331800105 23.8479828470126 35 25.248475755833454 25.700733074601125 25.352088424129178 23.69870274543625 36 24.7686308154856 25.814302740644912 25.188771201667386 24.2282952422021 37 24.83469886445307 25.778816899046525 25.42234889320109 23.964135343299315 38 25.038068671841312 24.756090987494613 25.738577152508263 24.467263188155812 39 25.024780197403096 25.07254384073595 25.309864764505775 24.592811197355182 40 25.16024777202817 25.126933005126727 25.758453715682045 23.95436550716305 41 24.111805855014133 25.514844161755544 25.87834944420488 24.49500053902544 42 25.142055663360647 25.521844006037085 25.750068875473143 23.586031455129127 43 24.51603750419242 24.889013164199127 25.7857793110057 24.80917002060275 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 404.0 1 395.0 2 386.0 3 399.5 4 413.0 5 413.0 6 614.0 7 815.0 8 1047.0 9 1279.0 10 1801.0 11 2323.0 12 2323.0 13 5079.5 14 7836.0 15 11875.5 16 15915.0 17 13607.0 18 11299.0 19 11299.0 20 14623.0 21 17947.0 22 17683.5 23 17420.0 24 21155.5 25 24891.0 26 24891.0 27 30431.5 28 35972.0 29 41499.5 30 47027.0 31 54247.0 32 61467.0 33 61467.0 34 72573.0 35 83679.0 36 97801.0 37 111923.0 38 124843.0 39 137763.0 40 137763.0 41 148182.5 42 158602.0 43 168128.5 44 177655.0 45 193835.0 46 210015.0 47 210015.0 48 231370.5 49 252726.0 50 251857.0 51 250988.0 52 234837.5 53 218687.0 54 218687.0 55 206663.0 56 194639.0 57 184696.5 58 174754.0 59 159926.5 60 145099.0 61 145099.0 62 122685.0 63 100271.0 64 86263.0 65 72255.0 66 60827.0 67 49399.0 68 49399.0 69 40094.5 70 30790.0 71 26843.5 72 22897.0 73 18075.5 74 13254.0 75 13254.0 76 10231.0 77 7208.0 78 6224.0 79 5240.0 80 4018.5 81 2797.0 82 2797.0 83 2331.0 84 1865.0 85 1523.5 86 1182.0 87 1180.0 88 1178.0 89 1178.0 90 856.0 91 534.0 92 423.5 93 313.0 94 289.0 95 265.0 96 265.0 97 161.5 98 58.0 99 58.0 100 58.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2671488.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.4256193059177 #Duplication Level Percentage of deduplicated Percentage of total 1 83.98900816343757 48.2312080867518 2 8.436587268489363 9.689524974428446 3 2.821896018851229 4.8614737949830635 4 1.3980960588449385 3.2114612811333343 5 0.7877594310957023 2.2618786597374054 6 0.5141243142026491 1.7714344285990409 7 0.3618038327665221 1.4543766414710546 8 0.2622076098110507 1.2045947504099204 9 0.2053446203939642 1.0612837797535775 >10 1.0901036675272817 11.188379099824953 >50 0.0723188123265581 2.8814648920930717 >100 0.050357050621512196 5.9730196958525275 >500 0.007794863723674859 3.054778669217754 >1k 0.0024683735124880805 2.65609411233008 >5k 1.299143953941095E-4 0.49902713341411153 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7884 0.2951164294954722 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5494 0.20565317905227348 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 4325 0.1618947942120646 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 4068 0.15227468736524363 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 3052 0.11424344784629391 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 3051 0.11420601552393274 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3004 0.1124466963729577 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2965 0.11098683580087203 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.7432322361171004E-5 2 0.0 0.0 0.0 0.0 3.7432322361171004E-5 3 0.0 0.0 0.0 0.0 3.7432322361171004E-5 4 0.0 0.0 0.0 0.0 3.7432322361171004E-5 5 0.0 0.0 0.0 0.0 3.7432322361171004E-5 6 0.0 0.0 0.0 0.0 7.486464472234201E-5 7 0.0 0.0 0.0 0.0 7.486464472234201E-5 8 0.0 0.0 0.0 0.0 1.1229696708351301E-4 9 0.0 0.0 0.0 3.7432322361171004E-5 2.9945857888936803E-4 10 0.0 0.0 0.0 3.7432322361171004E-5 2.9945857888936803E-4 11 0.0 0.0 0.0 3.7432322361171004E-5 3.3689090125053905E-4 12 0.0 0.0 0.0 3.7432322361171004E-5 3.3689090125053905E-4 13 0.0 0.0 0.0 3.7432322361171004E-5 3.3689090125053905E-4 14 0.0 0.0 0.0 7.486464472234201E-5 3.7432322361171E-4 15 0.0 0.0 0.0 7.486464472234201E-5 3.7432322361171E-4 16 0.0 0.0 0.0 1.4972928944468402E-4 4.4918786833405205E-4 17 0.0 0.0 0.0 1.4972928944468402E-4 4.4918786833405205E-4 18 0.0 0.0 0.0 1.87161611805855E-4 4.4918786833405205E-4 19 0.0 0.0 0.0 2.62026256528197E-4 4.4918786833405205E-4 20 0.0 0.0 0.0 2.9945857888936803E-4 4.4918786833405205E-4 21 0.0 0.0 0.0 5.24052513056394E-4 4.86620190695223E-4 22 0.0 0.0 0.0 7.112141248622491E-4 4.86620190695223E-4 23 0.0 0.0 0.0 9.358080590292751E-4 6.737818025010781E-4 24 0.0 0.0 0.0 0.001684454506252695 6.737818025010781E-4 25 0.0 0.0 0.0 0.0018716161180585501 6.737818025010781E-4 26 0.0 0.0 0.0 0.0026951272100043124 7.112141248622491E-4 27 0.0 0.0 0.0 0.006662953380288439 7.112141248622491E-4 28 0.0 0.0 0.0 0.013251042115854535 7.112141248622491E-4 29 0.0 0.0 0.0 0.023432633798093048 7.112141248622491E-4 30 0.0 0.0 0.0 0.04076379905131522 7.112141248622491E-4 31 0.0 0.0 0.0 0.10750562982128312 7.112141248622491E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTATAC 225 0.0 20.555555 3 CGCCGTA 85 1.2465716E-6 19.588236 33 AGGTTAT 495 0.0 19.434343 1 AAGACGG 935 0.0 19.390373 5 CGAACGT 215 0.0 18.930233 4 GGTTATC 515 0.0 18.679611 2 ACGAACG 440 0.0 18.5 15 CAAGACG 995 0.0 18.407036 4 TATACTA 345 0.0 18.231884 5 TAACGAA 480 0.0 17.34375 13 CGAACGA 470 0.0 16.925533 16 CCGATAA 505 0.0 16.851486 9 CGCAAGA 1090 0.0 16.463303 2 ATTCCGA 540 0.0 16.444443 6 AATTAAC 440 0.0 16.397728 2 TTATCTA 565 0.0 16.371681 4 TCGAACG 250 0.0 16.279999 3 CGATAAC 530 0.0 16.056604 10 CGAGACT 520 0.0 16.009615 20 TTAGAGT 545 0.0 15.954128 4 >>END_MODULE