##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727166.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4655911 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.106323767786797 31.0 31.0 33.0 30.0 34.0 2 31.252729487311935 31.0 31.0 34.0 30.0 34.0 3 31.30497962697311 31.0 31.0 34.0 28.0 34.0 4 35.14190090832922 35.0 35.0 37.0 32.0 37.0 5 34.99412145120471 35.0 35.0 37.0 32.0 37.0 6 35.02415209397259 36.0 35.0 37.0 32.0 37.0 7 34.8474021518023 35.0 35.0 37.0 32.0 37.0 8 34.779837071627874 35.0 35.0 37.0 32.0 37.0 9 36.3909020168126 38.0 35.0 39.0 32.0 39.0 10 36.17671085207599 38.0 35.0 39.0 32.0 39.0 11 36.28782530422081 38.0 35.0 39.0 32.0 39.0 12 36.159491880321596 38.0 35.0 39.0 31.0 39.0 13 36.25970814304655 38.0 35.0 39.0 32.0 39.0 14 37.215301151589884 39.0 36.0 40.0 31.0 41.0 15 37.111938995397466 39.0 36.0 40.0 31.0 41.0 16 37.07088000608259 39.0 36.0 40.0 31.0 41.0 17 36.99138106377033 39.0 36.0 40.0 31.0 41.0 18 36.990474903837296 39.0 36.0 40.0 31.0 41.0 19 37.01774067416667 39.0 36.0 40.0 31.0 41.0 20 36.90056790174898 39.0 36.0 40.0 31.0 41.0 21 36.77619653812111 39.0 35.0 40.0 30.0 41.0 22 36.72514831146901 39.0 35.0 40.0 30.0 41.0 23 36.50539475518325 38.0 35.0 40.0 30.0 41.0 24 36.39193189045066 38.0 35.0 40.0 30.0 41.0 25 36.2637009169634 38.0 35.0 40.0 29.0 41.0 26 35.949988090408084 38.0 34.0 40.0 28.0 41.0 27 36.081711398692974 38.0 34.0 40.0 29.0 41.0 28 35.94966720798572 38.0 34.0 40.0 28.0 41.0 29 35.84353738720521 38.0 34.0 40.0 27.0 41.0 30 35.96695168786517 38.0 34.0 40.0 29.0 41.0 31 35.890473636630944 38.0 34.0 40.0 28.0 41.0 32 35.711942088240086 38.0 34.0 40.0 27.0 41.0 33 35.62203186444071 38.0 34.0 40.0 27.0 41.0 34 35.644522629405934 38.0 34.0 40.0 27.0 41.0 35 35.35451794503804 38.0 34.0 40.0 26.0 41.0 36 35.201690711012304 38.0 34.0 40.0 25.0 41.0 37 35.004496219966406 38.0 33.0 40.0 25.0 41.0 38 34.85785767812143 38.0 33.0 40.0 24.0 41.0 39 34.78627319121865 38.0 33.0 40.0 24.0 41.0 40 34.6504510073324 38.0 33.0 40.0 24.0 41.0 41 34.471521470234286 38.0 33.0 40.0 23.0 41.0 42 34.304202335482785 38.0 33.0 40.0 23.0 41.0 43 33.882788781830236 37.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 6.0 13 10.0 14 22.0 15 56.0 16 174.0 17 343.0 18 733.0 19 1538.0 20 3064.0 21 5581.0 22 9759.0 23 15944.0 24 25119.0 25 37827.0 26 54016.0 27 75065.0 28 101012.0 29 129406.0 30 162015.0 31 195647.0 32 234170.0 33 276993.0 34 331029.0 35 392665.0 36 477030.0 37 596886.0 38 776188.0 39 753610.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.731145634012336 19.726493912791717 12.913240824405792 25.629119628790153 2 17.54889644582983 23.971807021225278 33.61735222172417 24.861944311220725 3 20.843933657666565 25.44112204893951 29.741010942863817 23.97393335053011 4 15.476004588575684 16.93393623718323 33.29372060591365 34.29633856832744 5 14.114466535120624 37.84241150657734 33.34380747398307 14.699314484318965 6 33.90187226517002 33.957564910497645 16.3310037498569 15.809559074475436 7 26.797419452390734 31.55511348906798 22.585848397875303 19.061618660665978 8 27.34251148701081 33.01549363808716 21.68142818881203 17.960566686090004 9 27.847740216683697 13.841007699674671 19.936592430568368 38.374659653073266 10 17.4756132580713 26.879250913516174 32.914288954406565 22.730846874005966 11 35.01042008749738 22.319606195221514 20.91536973107948 21.754603986201626 12 21.459581164674326 26.62462834878072 29.530955381234737 22.384835105310216 13 30.51615462580792 19.145619407243824 25.476260177653742 24.861965789294512 14 22.64645952209997 21.62824847811739 25.86939484023642 29.855897159546217 15 26.65132559449697 26.46631346690261 23.222243724160535 23.66011721443988 16 23.453090061214656 25.828844236928067 27.062115233731916 23.655950468125358 17 24.00284283784634 26.838657354060246 26.360233260472548 22.798266547620862 18 24.43974981480531 23.672767799899955 28.571873474385573 23.315608910909162 19 24.061778672315686 27.161129153886314 27.37137801817947 21.405714155618526 20 23.602942582021004 24.535885673072357 27.95603266471374 23.9051390801929 21 23.63200241585374 26.59765188810525 27.27071028634353 22.49963540969748 22 24.027864793807268 25.896478691280826 25.465821833793644 24.609834681118258 23 21.92694405026213 25.58902006503131 27.138512742189448 25.345523142517113 24 22.581703129634565 27.96150957352922 26.534141223919445 22.922646072916773 25 23.98140772020771 25.39268899255162 25.234889584444375 25.391013702796293 26 23.184893353846327 26.10820954266523 27.148585958795174 23.558311144693274 27 24.749979112573243 25.676113654234374 25.58279142363331 23.991115809559073 28 22.719313148382778 26.429564482654417 27.298417001527735 23.552705367435074 29 23.264791788331003 25.758653891794754 27.705684236661742 23.270870083212504 30 23.117495158305218 26.94353478835828 27.7309639295081 22.208006123828397 31 24.467220271177865 25.86814911195682 25.457874946492748 24.206755670372566 32 21.596718665799237 26.7383117933311 26.834791300778733 24.83017824009093 33 22.46975940906087 25.86456227363453 27.483128436089093 24.18254988121551 34 22.806793342913988 25.990123092988675 27.6445576386662 23.558525925431134 35 23.041527211323412 26.577763191779226 28.050557667446824 22.330151929450544 36 23.24988600512338 26.17932344497135 26.936081896754473 23.634708653150803 37 22.539455758497102 26.03673051310474 27.903669120822972 23.52014460757519 38 22.943952322112686 25.276020095744954 28.117483345364636 23.662544236777723 39 22.93121582435747 23.868948525863146 28.117826994545215 25.082008655234173 40 22.90166199482765 24.964695416213928 28.607398208427952 23.52624438053047 41 21.456123194794746 24.95006884796552 29.173281018473073 24.420526938766656 42 22.847752029624278 25.545569921761818 28.708065940263893 22.898612108350008 43 21.68933211996535 23.920044863400523 29.11290615306006 25.277716863574067 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1990.0 1 2061.0 2 2132.0 3 4883.0 4 7634.0 5 7634.0 6 11237.0 7 14840.0 8 14578.5 9 14317.0 10 17710.0 11 21103.0 12 21103.0 13 31736.0 14 42369.0 15 56331.5 16 70294.0 17 62850.0 18 55406.0 19 55406.0 20 56211.5 21 57017.0 22 48502.0 23 39987.0 24 43679.0 25 47371.0 26 47371.0 27 52447.5 28 57524.0 29 62609.0 30 67694.0 31 75582.0 32 83470.0 33 83470.0 34 98397.0 35 113324.0 36 136411.0 37 159498.0 38 182022.0 39 204546.0 40 204546.0 41 220587.0 42 236628.0 43 255385.5 44 274143.0 45 312681.5 46 351220.0 47 351220.0 48 452988.0 49 554756.0 50 549175.5 51 543595.0 52 443837.5 53 344080.0 54 344080.0 55 319454.5 56 294829.0 57 283360.0 58 271891.0 59 251876.0 60 231861.0 61 231861.0 62 192576.0 63 153291.0 64 133381.0 65 113471.0 66 96316.5 67 79162.0 68 79162.0 69 66636.0 70 54110.0 71 46616.0 72 39122.0 73 29372.0 74 19622.0 75 19622.0 76 15451.5 77 11281.0 78 9877.0 79 8473.0 80 6913.0 81 5353.0 82 5353.0 83 4553.0 84 3753.0 85 3349.0 86 2945.0 87 1972.5 88 1000.0 89 1000.0 90 722.0 91 444.0 92 312.0 93 180.0 94 171.5 95 163.0 96 163.0 97 84.5 98 6.0 99 11.0 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4655911.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.61809373021276 #Duplication Level Percentage of deduplicated Percentage of total 1 82.38752002846633 36.75974090829892 2 8.965601924964062 8.00056134071645 3 3.0196989416792297 4.041996312506045 4 1.5313601432843722 2.733054816310967 5 0.8938006815399135 1.9939841292537959 6 0.589050793287448 1.5769394104053325 7 0.41550796859727995 1.2977421441966617 8 0.31036764886691237 1.1078410278375728 9 0.2474545047407177 0.9936853457836249 >10 1.4191577796274457 11.596966749970523 >50 0.10806571733176622 3.313872520165607 >100 0.08656779923858293 8.027632971570501 >500 0.014629850097342138 4.545336001728641 >1k 0.010045830284272124 8.40514755632396 >5k 7.314924964275816E-4 2.200962732628151 >10k+ 4.388954978565489E-4 3.4045360323031626 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27717 0.5953077711322231 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 22876 0.4913324159332083 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 21558 0.4630243146829911 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 17870 0.3838131785594699 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16738 0.3594999990334867 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 13798 0.2963544621020462 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13041 0.28009556024588955 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 12536 0.26924913298385644 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 10335 0.22197589258042089 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 9222 0.19807079645637557 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 8758 0.1881049702195768 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 8451 0.1815112015672121 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 8199 0.17609872697308862 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGT 8157 0.17519664787406802 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 7415 0.1592599171247045 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCTGT 7318 0.15717654396744268 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 6048 0.12989939025896327 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 5974 0.12831001279878415 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC 5779 0.12412178841047433 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5321 0.11428483061639279 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 5288 0.11357605418144806 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 5115 0.10986034741643472 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCT 5056 0.10859314106304867 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGTCT 5053 0.10852870684169005 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT 4735 0.1016986793776771 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.1478073786204248E-5 2 0.0 0.0 0.0 0.0 2.1478073786204248E-5 3 0.0 0.0 0.0 0.0 2.1478073786204248E-5 4 0.0 0.0 0.0 2.1478073786204248E-5 2.1478073786204248E-5 5 0.0 0.0 0.0 2.1478073786204248E-5 2.1478073786204248E-5 6 0.0 0.0 0.0 2.1478073786204248E-5 4.2956147572408496E-5 7 0.0 0.0 0.0 4.2956147572408496E-5 6.443422135861274E-5 8 2.1478073786204248E-5 0.0 0.0 4.2956147572408496E-5 6.443422135861274E-5 9 2.1478073786204248E-5 0.0 0.0 8.591229514481699E-5 1.2886844271722548E-4 10 2.1478073786204248E-5 0.0 0.0 1.5034651650342972E-4 1.2886844271722548E-4 11 2.1478073786204248E-5 0.0 0.0 1.9330266407583822E-4 1.2886844271722548E-4 12 2.1478073786204248E-5 0.0 0.0 2.7921495922065523E-4 1.5034651650342972E-4 13 2.1478073786204248E-5 0.0 0.0 2.7921495922065523E-4 1.5034651650342972E-4 14 8.591229514481699E-5 0.0 0.0 4.0808340193788066E-4 1.9330266407583822E-4 15 8.591229514481699E-5 0.0 0.0 7.087764349447401E-4 2.5773688543445097E-4 16 8.591229514481699E-5 0.0 0.0 0.0015034651650342973 3.221711067930637E-4 17 8.591229514481699E-5 0.0 0.0 0.0026418030757031224 3.221711067930637E-4 18 8.591229514481699E-5 0.0 0.0 0.0033505795106478623 3.221711067930637E-4 19 8.591229514481699E-5 0.0 0.0 0.0054983868892682876 3.4364918057926797E-4 20 8.591229514481699E-5 0.0 0.0 0.007238110865950831 3.4364918057926797E-4 21 8.591229514481699E-5 0.0 0.0 0.011490769475619273 3.651272543654722E-4 22 8.591229514481699E-5 0.0 0.0 0.017203937102749603 3.651272543654722E-4 23 8.591229514481699E-5 2.1478073786204248E-5 0.0 0.02448500411627284 4.510395495102892E-4 24 8.591229514481699E-5 2.1478073786204248E-5 0.0 0.03737184838799539 4.510395495102892E-4 25 8.591229514481699E-5 2.1478073786204248E-5 0.0 0.04557647257432541 4.510395495102892E-4 26 8.591229514481699E-5 2.1478073786204248E-5 0.0 0.06226493590620611 4.510395495102892E-4 27 8.591229514481699E-5 2.1478073786204248E-5 0.0 0.12117929230176436 4.510395495102892E-4 28 8.591229514481699E-5 2.1478073786204248E-5 0.0 0.21566133888727684 4.725176232964934E-4 29 8.591229514481699E-5 2.1478073786204248E-5 0.0 0.31089511805530645 4.725176232964934E-4 30 8.591229514481699E-5 2.1478073786204248E-5 0.0 0.45022338270641343 4.725176232964934E-4 31 8.591229514481699E-5 2.1478073786204248E-5 0.0 0.820011379083492 4.725176232964934E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1405 0.0 16.064056 5 CAAGACG 1390 0.0 15.571941 4 CTTATAC 4310 0.0 14.980278 37 TACGGAT 1185 0.0 14.831224 27 GTATACG 100 1.0945024E-4 14.799999 1 CGAGCCG 1340 0.0 14.634329 15 CGTTACG 500 0.0 14.429999 24 GTTACGG 910 0.0 14.230769 25 CGGATGG 1390 0.0 13.708632 29 ACGGATG 1270 0.0 13.692912 28 ATACCGT 1085 0.0 13.640553 6 TTACGGA 1315 0.0 13.224335 26 CCCGTTA 140 9.5729865E-6 13.214285 22 TATTCCG 140 9.5729865E-6 13.214285 5 CTGTACG 155 1.8908468E-6 13.129032 9 GACGGAC 1635 0.0 13.012232 7 AGACGGA 1735 0.0 12.902017 6 TACCGTC 1105 0.0 12.891403 7 TACTTAC 1300 0.0 12.807693 31 TCTTATA 6655 0.0 12.75958 37 >>END_MODULE