##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727165.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9272954 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.152803087344118 31.0 31.0 33.0 30.0 34.0 2 31.283440746066464 31.0 31.0 34.0 30.0 34.0 3 31.339169912845463 31.0 31.0 34.0 28.0 34.0 4 35.17328566495639 35.0 35.0 37.0 33.0 37.0 5 35.028661093325816 35.0 35.0 37.0 32.0 37.0 6 35.066035591247406 36.0 35.0 37.0 32.0 37.0 7 34.88131980380793 36.0 35.0 37.0 32.0 37.0 8 34.81669951128842 36.0 35.0 37.0 32.0 37.0 9 36.4331966922299 38.0 35.0 39.0 32.0 39.0 10 36.21698144949279 38.0 35.0 39.0 32.0 39.0 11 36.3314432488288 38.0 35.0 39.0 32.0 39.0 12 36.20291236212322 38.0 35.0 39.0 32.0 39.0 13 36.29948245187025 38.0 35.0 39.0 32.0 39.0 14 37.261758982089205 39.0 36.0 41.0 32.0 41.0 15 37.152831125874236 39.0 36.0 41.0 31.0 41.0 16 37.10880567292796 39.0 36.0 40.0 31.0 41.0 17 37.04221082084522 39.0 36.0 40.0 31.0 41.0 18 37.0463130734823 39.0 36.0 40.0 31.0 41.0 19 37.06272132914711 39.0 36.0 40.0 31.0 41.0 20 36.96482199739155 39.0 36.0 40.0 31.0 41.0 21 36.83794128602385 39.0 36.0 40.0 30.0 41.0 22 36.7986066791661 39.0 35.0 40.0 30.0 41.0 23 36.58733462928858 38.0 35.0 40.0 30.0 41.0 24 36.47500063086693 38.0 35.0 40.0 30.0 41.0 25 36.3585872419943 38.0 35.0 40.0 30.0 41.0 26 36.04510957349729 38.0 34.0 40.0 29.0 41.0 27 36.1773007824691 38.0 35.0 40.0 29.0 41.0 28 36.04865288882054 38.0 35.0 40.0 29.0 41.0 29 35.950853525208906 38.0 34.0 40.0 28.0 41.0 30 36.06691438348557 38.0 35.0 40.0 29.0 41.0 31 35.99688211545102 38.0 35.0 40.0 29.0 41.0 32 35.80584547275873 38.0 34.0 40.0 28.0 41.0 33 35.73035809300898 38.0 34.0 40.0 27.0 41.0 34 35.745014695425 38.0 34.0 40.0 28.0 41.0 35 35.465214428972686 38.0 34.0 40.0 27.0 41.0 36 35.32881086221284 38.0 34.0 40.0 26.0 41.0 37 35.12922958530798 38.0 33.0 40.0 25.0 41.0 38 34.97981872874598 38.0 33.0 40.0 25.0 41.0 39 34.90997108364821 38.0 33.0 40.0 24.0 41.0 40 34.76624406850287 38.0 33.0 40.0 24.0 41.0 41 34.59378651074943 38.0 33.0 40.0 24.0 41.0 42 34.41994751618524 38.0 33.0 40.0 23.0 41.0 43 33.98356446068858 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 7.0 13 15.0 14 50.0 15 107.0 16 324.0 17 775.0 18 1375.0 19 2694.0 20 5500.0 21 10514.0 22 18433.0 23 30716.0 24 48011.0 25 72050.0 26 103211.0 27 144536.0 28 193392.0 29 251568.0 30 315165.0 31 384087.0 32 458164.0 33 544796.0 34 651350.0 35 777129.0 36 942733.0 37 1191212.0 38 1550434.0 39 1574601.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.44187990148555 19.305423061518475 12.595533203335204 25.657163833660775 2 17.162147035346017 24.055236335691948 33.43152570367544 25.35109092528659 3 20.85428224921638 25.621425491811994 29.43710278299666 24.08718947597497 4 15.14052587773001 16.892890873825106 33.073290345234106 34.89329290321078 5 13.95780675715635 37.9072299938078 33.37816622405331 14.756797024982546 6 33.93590650832518 33.58895126623081 16.471428629970557 16.00371359547346 7 26.89050328514517 31.281121420423307 22.524386511569023 19.303988782862504 8 27.797183076719673 32.48105188486862 21.750846601848774 17.970918436562933 9 28.045787782404613 13.568933912537473 19.698307572754054 38.68697073230386 10 17.590381662628758 26.80584849229275 32.67810883133897 22.925661013739525 11 35.05442817898158 22.214474481378858 20.66015856435824 22.070938775281316 12 21.775628348851942 26.77719527132346 29.180862969879932 22.26631340994466 13 30.77940427613466 18.9195050466119 25.247229739304217 25.053860937949224 14 22.89107656524555 21.52869517092396 25.611159076169255 29.969069187661233 15 27.096392368602277 25.88595823941324 23.115708327680693 23.90194106430378 16 23.553044693201326 25.449096372094587 27.22862639025277 23.769232544451317 17 24.405868938851633 26.641111343806944 26.24644746431396 22.70657225302746 18 24.91769073803235 22.876561233885123 28.651366112675635 23.554381915406893 19 24.258418622587797 27.105019608638198 27.317282065671844 21.31927970310216 20 23.93748529325175 24.149294820183513 27.99540470059487 23.917815185969864 21 23.799546509127513 26.28879642884026 27.183883366616506 22.72777369541572 22 24.089896272536237 25.860313768406485 25.071988926074688 24.977801032982587 23 21.8180635857786 25.359297587370754 26.997836935242 25.82480189160865 24 22.6664663709105 28.17947765081116 26.206621967498165 22.947434010780167 25 24.157652458968307 25.062197008633923 24.822446008035843 25.957704524361922 26 23.451599134429006 25.844245533839594 26.96661711036203 23.737538221369373 27 24.96178671866592 25.304395988592198 25.281091656445188 24.452725636296694 28 22.863275284229815 26.126927837666404 27.374804188611314 23.634992689492474 29 23.54100969335122 25.25448740498443 27.59479880952715 23.6097040921372 30 22.973261810637688 27.084033847250833 27.855179697861114 22.087524644250365 31 25.03686527507847 25.504386196674762 24.885317019797576 24.573431508449197 32 21.36306294628443 26.692109116469247 26.710916499747544 25.233911437498772 33 22.5543122504436 25.89736776436074 27.33716785395463 24.211152131241025 34 22.73455686289396 25.89388451619624 27.349030309004014 24.022528311905784 35 22.965227693354244 26.851076798181033 27.996288992698553 22.187406515766174 36 23.60704043177611 26.211485574068416 26.478444732929766 23.703029261225712 37 22.782890975195176 26.22139611605967 27.44048983743476 23.555223071310394 38 23.23279075901811 25.527237598719886 27.707837222097726 23.532134420164276 39 23.425609573820815 23.768941375100102 27.360892764053396 25.444556287025687 40 23.16673845249313 25.26374011992295 28.04437507184873 23.525146355735185 41 21.788418232205185 25.089566927647866 28.518905625974206 24.603109214172743 42 23.511224147127226 25.692481597557805 28.039457545028263 22.756836710286713 43 22.374822521496387 23.73181189079553 28.649921049969624 25.24344453773846 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1763.0 1 2074.5 2 2386.0 3 7638.5 4 12891.0 5 12891.0 6 19623.5 7 26356.0 8 26322.0 9 26288.0 10 32384.0 11 38480.0 12 38480.0 13 58480.5 14 78481.0 15 108949.5 16 139418.0 17 124307.5 18 109197.0 19 109197.0 20 110481.5 21 111766.0 22 93805.0 23 75844.0 24 82974.0 25 90104.0 26 90104.0 27 99766.5 28 109429.0 29 118192.0 30 126955.0 31 140750.0 32 154545.0 33 154545.0 34 182589.0 35 210633.0 36 254702.0 37 298771.0 38 342028.5 39 385286.0 40 385286.0 41 419005.0 42 452724.0 43 489612.0 44 526500.0 45 602898.0 46 679296.0 47 679296.0 48 928383.5 49 1177471.0 50 1167759.5 51 1158048.0 52 915047.5 53 672047.0 54 672047.0 55 627286.5 56 582526.0 57 562265.5 58 542005.0 59 506403.5 60 470802.0 61 470802.0 62 391223.0 63 311644.0 64 271263.5 65 230883.0 66 196715.5 67 162548.0 68 162548.0 69 137808.0 70 113068.0 71 97972.5 72 82877.0 73 61952.5 74 41028.0 75 41028.0 76 32428.5 77 23829.0 78 20896.5 79 17964.0 80 14771.0 81 11578.0 82 11578.0 83 9687.5 84 7797.0 85 6834.0 86 5871.0 87 3979.0 88 2087.0 89 2087.0 90 1525.5 91 964.0 92 687.5 93 411.0 94 382.0 95 353.0 96 353.0 97 188.5 98 24.0 99 20.0 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 9272954.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.308761526135605 #Duplication Level Percentage of deduplicated Percentage of total 1 79.03377653986618 28.69618544895893 2 10.095400421199288 7.331029728083478 3 3.67053122142495 3.9981732837886135 4 1.8621065566373611 2.7044313160479785 5 1.1038913499924163 2.0040463888819273 6 0.717844087915791 1.563841788064847 7 0.5200928279552489 1.321874852317643 8 0.38791010936724035 1.126762852367385 9 0.3129501677332078 1.0226549708810264 >10 2.0017289986319597 13.728978534439538 >50 0.15944881512435563 3.9953276686838213 >100 0.10298998982268621 7.47627678679107 >500 0.014764559951251926 3.7370174280838877 >1k 0.014223739092911539 10.329134011367168 >5k 0.0014703865253674674 3.559001759684909 >10k+ 8.702287599113582E-4 7.405263181557956 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 59297 0.6394618155120795 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 59133 0.6376932313047169 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 58128 0.6268552610095984 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 37516 0.40457442148424333 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 36713 0.3959148292981935 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 34276 0.3696340993387867 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 32576 0.35130121426246697 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 27090 0.2921399157161785 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24514 0.2643602028005315 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 23314 0.2514193427466587 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 22982 0.24783903813175392 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 21043 0.22692876509470444 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGT 20632 0.22249652052625302 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 20583 0.2219681020740532 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 19034 0.2052636085545124 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCTGT 18816 0.2029126856447255 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 17156 0.18501116257020148 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 15599 0.16822039665030153 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC 15546 0.16764884199792213 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCT 13058 0.14081812548622585 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 12153 0.13105856019559678 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT 12146 0.13098307184528254 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCT 12143 0.13095071969514785 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTC 11793 0.12717630217943496 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGTCT 11353 0.1224313201596816 No Hit GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGC 11252 0.12134213110514729 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 10960 0.11819318849203825 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT 10454 0.11273645916932187 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 10403 0.11218647261703228 No Hit CCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCA 9780 0.10546800943906333 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9545 0.10293375767851325 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0784050044894E-5 2 0.0 0.0 0.0 1.0784050044894E-5 1.0784050044894E-5 3 0.0 0.0 0.0 1.0784050044894E-5 1.0784050044894E-5 4 0.0 0.0 0.0 1.0784050044894E-5 1.0784050044894E-5 5 0.0 0.0 0.0 1.0784050044894E-5 1.0784050044894E-5 6 0.0 0.0 0.0 1.0784050044894E-5 5.392025022447E-5 7 0.0 0.0 0.0 2.1568100089788E-5 5.392025022447E-5 8 0.0 0.0 0.0 2.1568100089788E-5 6.4704300269364E-5 9 0.0 0.0 0.0 4.3136200179576E-5 9.7056450404046E-5 10 0.0 0.0 0.0 6.4704300269364E-5 9.7056450404046E-5 11 0.0 0.0 0.0 1.0784050044894E-4 9.7056450404046E-5 12 0.0 0.0 0.0 1.72544800718304E-4 9.7056450404046E-5 13 0.0 0.0 0.0 2.04896950852986E-4 9.7056450404046E-5 14 0.0 0.0 0.0 2.91169351212138E-4 1.50976700628516E-4 15 2.1568100089788E-5 0.0 0.0 5.9312275246917E-4 2.04896950852986E-4 16 2.1568100089788E-5 0.0 0.0 0.00134800625561175 2.6960125112235003E-4 17 3.2352150134682E-5 0.0 0.0 0.002070537608619648 2.6960125112235003E-4 18 3.2352150134682E-5 0.0 0.0 0.00253425176055009 2.80385301167244E-4 19 3.2352150134682E-5 0.0 0.0 0.00415185926728419 2.80385301167244E-4 20 3.2352150134682E-5 1.0784050044894E-5 0.0 0.005640058173479562 3.01953401257032E-4 21 3.2352150134682E-5 1.0784050044894E-5 0.0 0.00959780453995566 3.34305551391714E-4 22 3.2352150134682E-5 1.0784050044894E-5 0.0 0.014321218459619232 3.34305551391714E-4 23 4.3136200179576E-5 1.0784050044894E-5 0.0 0.021740644890506304 4.63714151930442E-4 24 4.3136200179576E-5 1.0784050044894E-5 0.0 0.03296684098724096 4.63714151930442E-4 25 4.3136200179576E-5 1.0784050044894E-5 0.0 0.04039705146817293 4.63714151930442E-4 26 4.3136200179576E-5 1.0784050044894E-5 0.0 0.05475062207792684 4.63714151930442E-4 27 4.3136200179576E-5 1.0784050044894E-5 0.0 0.09177226588204794 4.74498201975336E-4 28 4.3136200179576E-5 1.0784050044894E-5 0.0 0.15848239945976222 4.74498201975336E-4 29 4.3136200179576E-5 1.0784050044894E-5 0.0 0.22477195508572564 4.74498201975336E-4 30 4.3136200179576E-5 1.0784050044894E-5 0.0 0.3267675004103331 4.74498201975336E-4 31 4.3136200179576E-5 1.0784050044894E-5 0.0 0.6063332137741652 5.17634402154912E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 2925 0.0 17.393164 5 CAAGACG 3145 0.0 16.17647 4 CTTATAC 6565 0.0 15.8933735 37 TAGTACT 570 0.0 14.929824 4 TCGTTAC 740 0.0 14.5 23 TATACCG 315 0.0 14.095238 5 CGCAAGA 3570 0.0 14.043417 2 TCTAGAT 1725 0.0 13.942029 2 TCTAGCG 1965 0.0 13.933842 28 TCTTATA 10325 0.0 13.8145275 37 GCGCAAG 3670 0.0 13.811988 1 GTTACGG 885 0.0 13.79661 25 CTAGCGG 2000 0.0 13.782499 29 GACGGAC 3585 0.0 13.726639 7 ACCGTCG 2230 0.0 13.522423 8 AGTACTC 2970 0.0 13.516835 5 ACGAACG 1330 0.0 13.49248 15 ATACCGT 2320 0.0 13.396551 6 ACGGACC 3665 0.0 13.376534 8 TACCGTC 2275 0.0 13.336264 7 >>END_MODULE