##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727164.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5547764 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.93715053488216 31.0 31.0 33.0 28.0 34.0 2 31.10375279121462 31.0 31.0 34.0 28.0 34.0 3 31.14185823333509 31.0 31.0 34.0 28.0 34.0 4 34.99860989039909 35.0 35.0 37.0 32.0 37.0 5 34.83696963317113 35.0 35.0 37.0 32.0 37.0 6 34.86761927868597 35.0 35.0 37.0 32.0 37.0 7 34.68577286272451 35.0 35.0 37.0 31.0 37.0 8 34.6093179161911 35.0 35.0 37.0 30.0 37.0 9 36.197323462209276 38.0 35.0 39.0 32.0 39.0 10 35.95322403764832 37.0 35.0 39.0 30.0 39.0 11 36.08411749310172 38.0 35.0 39.0 31.0 39.0 12 35.92785814248768 37.0 35.0 39.0 30.0 39.0 13 36.04164074030546 37.0 35.0 39.0 30.0 39.0 14 36.947119055533 39.0 36.0 40.0 31.0 41.0 15 36.8616556147666 38.0 36.0 40.0 31.0 41.0 16 36.83462454423079 38.0 36.0 40.0 31.0 41.0 17 36.70634745818315 38.0 36.0 40.0 30.0 41.0 18 36.7119637749551 38.0 36.0 40.0 30.0 41.0 19 36.71574511821339 39.0 35.0 40.0 30.0 41.0 20 36.57448676619986 38.0 35.0 40.0 30.0 41.0 21 36.43016051151419 38.0 35.0 40.0 30.0 41.0 22 36.349704313305324 38.0 35.0 40.0 30.0 41.0 23 36.12449141672212 38.0 34.0 40.0 29.0 41.0 24 35.97622771985254 38.0 34.0 40.0 28.0 41.0 25 35.83835595746322 38.0 34.0 40.0 27.0 41.0 26 35.51909003339003 38.0 34.0 40.0 27.0 41.0 27 35.657173232314854 38.0 34.0 40.0 27.0 41.0 28 35.50426604304004 38.0 34.0 40.0 27.0 41.0 29 35.385227814305004 38.0 34.0 40.0 27.0 41.0 30 35.532041557643765 38.0 34.0 40.0 27.0 41.0 31 35.48765394490465 38.0 34.0 40.0 27.0 41.0 32 35.34440019438462 38.0 34.0 40.0 26.0 41.0 33 35.218597078029994 38.0 33.0 40.0 26.0 41.0 34 35.27074998143396 38.0 34.0 40.0 26.0 41.0 35 34.94426943900281 38.0 33.0 40.0 25.0 41.0 36 34.791204168021565 38.0 33.0 40.0 25.0 41.0 37 34.60495940346417 38.0 33.0 40.0 24.0 41.0 38 34.43388741842659 37.0 33.0 40.0 24.0 41.0 39 34.36016420309155 37.0 33.0 40.0 24.0 41.0 40 34.20194947009281 37.0 33.0 40.0 23.0 41.0 41 33.99667019000808 37.0 32.0 40.0 23.0 41.0 42 33.811114531908714 37.0 32.0 40.0 22.0 41.0 43 33.39643791624878 37.0 31.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 13.0 13 26.0 14 36.0 15 155.0 16 358.0 17 645.0 18 1260.0 19 2520.0 20 5010.0 21 9053.0 22 15580.0 23 24534.0 24 38094.0 25 54951.0 26 76539.0 27 103332.0 28 134672.0 29 169993.0 30 209346.0 31 251092.0 32 295017.0 33 346925.0 34 409578.0 35 480022.0 36 576117.0 37 709631.0 38 913950.0 39 719311.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 40.23835548880594 21.111099895381276 13.317671768301608 25.33287284751118 2 19.616479720478377 23.509399462558246 32.40990424250202 24.46421657446135 3 21.214583028405677 24.344672916872454 29.833100326545974 24.607643728175894 4 15.871403325736278 16.635224569754588 33.798950351889516 33.69442175261961 5 14.777413026221014 37.489968931627224 32.85689513829355 14.875722903858202 6 34.70097141839487 35.06095428716867 15.185162887246104 15.052911407190356 7 28.020460134930037 31.353622828945138 21.596358460814123 19.029558575310702 8 27.659882431913108 32.5194078190781 20.51215588839035 19.308553860618442 9 27.531488361797653 13.432673055306607 19.6787750884861 39.35706349440964 10 17.57949689280222 26.33612388702908 32.19558366217453 23.888795557994175 11 36.621366734417684 21.73293600809263 20.537751786125007 21.10794547136468 12 21.780126191380887 26.233235588247805 28.431112066050396 23.555526154320912 13 30.574407995725846 18.660382813688543 25.079040853215815 25.686168337369796 14 23.127371676228478 21.277653483457478 24.565049991311817 31.029924849002228 15 26.240535826686212 27.32673920520051 21.852732019602854 24.579992948510426 16 24.924041469680397 25.5979886671459 24.896516866975595 24.58145299619811 17 24.344582790471982 26.375040466753813 25.199792204571065 24.08058453820314 18 24.85179614706033 23.459884018137757 27.24636448125767 24.44195535354424 19 24.777207538027934 25.801782483898016 26.307878273120487 23.113131704953563 20 24.65620383275136 24.128621909655852 26.22157323202645 24.993601025566335 21 25.38548864010798 25.60157569788477 25.588579470936402 23.424356191070853 22 25.024135850046974 25.030120243038457 25.134252286146275 24.811491620768294 23 23.273070015234968 24.51245222399511 26.22440320100134 25.990074559768583 24 23.960103566049312 26.352418740234807 25.64575565939719 24.041722034318692 25 24.926096351611207 24.87193038492625 24.82755214533279 25.374421118129753 26 24.30831592692119 25.88603264306124 25.796320824029284 24.009330605988286 27 25.50577133418076 25.042071003741327 24.890550499264208 24.561607162813704 28 23.804365146030005 25.566949134822607 26.48286769228107 24.14581802686632 29 23.99478420495176 25.463033395075925 26.46794276036255 24.07423963960976 30 23.900620141736383 26.20280891544774 26.42104098155581 23.47552996126007 31 24.994087708128895 25.73925278724906 24.74321185976909 24.523447644852954 32 23.335581686603827 25.81596837933265 25.237212686047926 25.611237248015595 33 23.371470019272632 25.113757542678457 26.265176384575838 25.249596053473073 34 24.423821921768845 25.308556744663257 26.211280797092307 24.056340536475595 35 24.79881984886163 25.53066424599172 26.471205336059718 23.199310569086933 36 23.786808523217644 26.01873475511936 25.838211574969666 24.356245146693333 37 23.974686017646025 25.487619877125272 26.402817423379943 24.13487668184876 38 23.66373191073016 24.625831235791573 27.212693258040538 24.49774359543773 39 24.17300014924932 23.8392260377334 26.675810290416102 25.31196352260118 40 24.142988057891433 24.676770677339555 27.260892857014106 23.91934840775491 41 22.855027719275732 24.560345393207065 27.981922086087295 24.60270480142991 42 24.263937687327726 24.846532765272638 27.53494921557586 23.354580331823776 43 23.063399957171935 23.647869664246713 27.862919186901248 25.425811191680108 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 894.0 1 945.0 2 996.0 3 2106.0 4 3216.0 5 3216.0 6 5704.0 7 8192.0 8 8538.0 9 8884.0 10 12120.5 11 15357.0 12 15357.0 13 26311.5 14 37266.0 15 52482.0 16 67698.0 17 57990.5 18 48283.0 19 48283.0 20 49895.5 21 51508.0 22 44585.0 23 37662.0 24 42721.0 25 47780.0 26 47780.0 27 54872.5 28 61965.0 29 68338.5 30 74712.0 31 84139.0 32 93566.0 33 93566.0 34 114066.0 35 134566.0 36 165376.0 37 196186.0 38 226291.0 39 256396.0 40 256396.0 41 276703.5 42 297011.0 43 315855.5 44 334700.0 45 371116.0 46 407532.0 47 407532.0 48 481651.5 49 555771.0 50 550024.5 51 544278.0 52 487903.0 53 431528.0 54 431528.0 55 413081.5 56 394635.0 57 385479.5 58 376324.0 59 353472.5 60 330621.0 61 330621.0 62 273345.0 63 216069.0 64 190837.0 65 165605.0 66 141621.5 67 117638.0 68 117638.0 69 100025.5 70 82413.0 71 72971.0 72 63529.0 73 47228.0 74 30927.0 75 30927.0 76 24245.5 77 17564.0 78 15502.0 79 13440.0 80 11061.0 81 8682.0 82 8682.0 83 7395.5 84 6109.0 85 5476.5 86 4844.0 87 3376.5 88 1909.0 89 1909.0 90 1355.5 91 802.0 92 579.5 93 357.0 94 328.5 95 300.0 96 300.0 97 164.0 98 28.0 99 24.5 100 21.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5547764.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.739714600315686 #Duplication Level Percentage of deduplicated Percentage of total 1 81.65468713474331 34.89898023916999 2 9.299862013724637 7.949468965778163 3 3.140648641314323 4.026912797689302 4 1.5569995345188885 2.661828629526467 5 0.9188490826304728 1.9635673776194147 6 0.6178047693220033 1.5842879711721776 7 0.43513107989890953 1.3018164718024587 8 0.3204021185183233 1.095511608224773 9 0.26779883571083696 1.0301081227720201 >10 1.5660668171538046 12.310125607136028 >50 0.11061076093669181 3.2454528793380892 >100 0.08024828871501258 7.277999152680444 >500 0.014612304889547957 4.406193287554664 >1k 0.015295919203526276 12.614103282028207 >5k 7.263425320109768E-4 1.8807352471779286 >10k+ 2.5635618776858005E-4 1.7529083603299644 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29095 0.524445524359003 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17088 0.3080159862604105 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 15454 0.2785626785854626 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12464 0.22466709110192862 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 11520 0.20765122669241157 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 10371 0.1869401798634549 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 9825 0.17709837693167912 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 7304 0.1316566458126193 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 7278 0.1311879885301538 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT 6215 0.11202711578935225 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCC 6182 0.11143228154622295 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 6108 0.11009841081920572 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGG 5925 0.10679978456185231 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAAC 5832 0.10512343351303335 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGG 5832 0.10512343351303335 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8025280094827392E-5 2 0.0 0.0 0.0 0.0 1.8025280094827392E-5 3 0.0 0.0 0.0 0.0 1.8025280094827392E-5 4 0.0 0.0 0.0 0.0 1.8025280094827392E-5 5 0.0 0.0 0.0 0.0 1.8025280094827392E-5 6 1.8025280094827392E-5 0.0 0.0 0.0 9.012640047413696E-5 7 1.8025280094827392E-5 0.0 0.0 0.0 9.012640047413696E-5 8 1.8025280094827392E-5 0.0 0.0 0.0 1.0815168056896436E-4 9 1.8025280094827392E-5 0.0 0.0 0.0 1.4420224075861914E-4 10 3.6050560189654784E-5 0.0 0.0 1.8025280094827392E-5 1.4420224075861914E-4 11 3.6050560189654784E-5 0.0 0.0 3.6050560189654784E-5 1.4420224075861914E-4 12 3.6050560189654784E-5 0.0 0.0 5.407584028448218E-5 1.4420224075861914E-4 13 3.6050560189654784E-5 0.0 0.0 7.210112037930957E-5 1.6222752085344653E-4 14 5.407584028448218E-5 0.0 0.0 1.4420224075861914E-4 2.1630336113792872E-4 15 5.407584028448218E-5 0.0 0.0 2.1630336113792872E-4 2.1630336113792872E-4 16 7.210112037930957E-5 0.0 0.0 5.227331227499945E-4 3.0642976161206567E-4 17 7.210112037930957E-5 0.0 0.0 7.931123241724053E-4 3.0642976161206567E-4 18 7.210112037930957E-5 0.0 0.0 0.0010274409654051615 3.6050560189654785E-4 19 7.210112037930957E-5 0.0 0.0 0.0015681993682499832 3.7853088199137525E-4 20 7.210112037930957E-5 0.0 0.0 0.0020008060905258407 3.7853088199137525E-4 21 7.210112037930957E-5 0.0 0.0 0.003352702097637895 3.9655616208620264E-4 22 7.210112037930957E-5 0.0 0.0 0.005263381787689599 3.9655616208620264E-4 23 7.210112037930957E-5 0.0 0.0 0.008327679403810255 4.686572824655122E-4 24 7.210112037930957E-5 0.0 0.0 0.013122403909034342 4.686572824655122E-4 25 7.210112037930957E-5 0.0 0.0 0.015952372883922244 4.686572824655122E-4 26 7.210112037930957E-5 0.0 0.0 0.02274790347967217 4.686572824655122E-4 27 7.210112037930957E-5 0.0 0.0 0.05002015226314602 4.686572824655122E-4 28 7.210112037930957E-5 0.0 0.0 0.09007232463385248 4.686572824655122E-4 29 7.210112037930957E-5 0.0 0.0 0.13682990119983474 4.686572824655122E-4 30 9.012640047413696E-5 0.0 0.0 0.21354549328342012 4.686572824655122E-4 31 9.012640047413696E-5 0.0 0.0 0.43188571107206436 4.686572824655122E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 2405 0.0 18.76923 5 CAAGACG 2485 0.0 18.090544 4 GACGGAC 2875 0.0 15.507827 7 CGCAAGA 2870 0.0 15.470385 2 GCGCAAG 2880 0.0 15.352431 1 ACCGTCG 2005 0.0 15.132169 8 TCTTATA 4665 0.0 15.109325 37 CTTATAC 2805 0.0 15.103387 37 AGACGGA 3005 0.0 15.021631 6 ACGGACC 3000 0.0 14.985 8 TACCGTC 1995 0.0 14.744361 7 ATACCGT 2085 0.0 14.729016 6 CGGACCA 3065 0.0 14.606852 9 CGTATTA 90 8.28105E-4 14.388889 28 CGTCGTA 2045 0.0 14.3838625 10 AGGTTAT 1475 0.0 14.2983055 1 GGTTATC 1490 0.0 14.278523 2 TTATCTA 1555 0.0 14.276526 4 CCGTCGT 2105 0.0 14.237531 9 GCAAGAC 3410 0.0 13.725805 3 >>END_MODULE