##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727161.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6532456 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.455321245179455 31.0 31.0 34.0 30.0 34.0 2 31.665721284613323 31.0 31.0 34.0 30.0 34.0 3 31.839850126812948 31.0 31.0 34.0 30.0 34.0 4 35.55597221014577 37.0 35.0 37.0 33.0 37.0 5 35.358176771492985 37.0 35.0 37.0 33.0 37.0 6 35.38701630749598 37.0 35.0 37.0 33.0 37.0 7 35.27693244317298 37.0 35.0 37.0 32.0 37.0 8 35.251238125446235 37.0 35.0 37.0 32.0 37.0 9 36.761938541951146 39.0 35.0 39.0 32.0 39.0 10 36.546893388948966 38.0 35.0 39.0 32.0 39.0 11 36.626977510449365 39.0 35.0 39.0 32.0 39.0 12 36.45772692537079 38.0 35.0 39.0 32.0 39.0 13 36.45382349303233 38.0 35.0 39.0 32.0 39.0 14 37.41439207550728 39.0 36.0 41.0 32.0 41.0 15 37.35062065477364 39.0 36.0 41.0 32.0 41.0 16 37.26553749462683 39.0 36.0 41.0 31.0 41.0 17 37.584436848866645 39.0 36.0 41.0 32.0 41.0 18 37.621063348915015 39.0 37.0 41.0 32.0 41.0 19 37.69990199704368 40.0 37.0 41.0 32.0 41.0 20 37.67888386848683 40.0 37.0 41.0 32.0 41.0 21 37.62868957709015 40.0 37.0 41.0 32.0 41.0 22 37.57446984717539 39.0 37.0 41.0 32.0 41.0 23 37.44506354118573 39.0 36.0 41.0 32.0 41.0 24 37.318027247332395 39.0 36.0 41.0 31.0 41.0 25 37.23931213620115 39.0 36.0 41.0 31.0 41.0 26 36.94044353302954 39.0 36.0 41.0 30.0 41.0 27 36.746994545389974 39.0 36.0 41.0 30.0 41.0 28 36.52895220419395 39.0 36.0 40.0 30.0 41.0 29 36.33969872893135 39.0 35.0 40.0 29.0 41.0 30 36.19168946564661 39.0 35.0 40.0 29.0 41.0 31 36.03232949445048 39.0 35.0 40.0 27.0 41.0 32 35.85655731932982 38.0 35.0 40.0 27.0 41.0 33 35.68673451455318 38.0 35.0 40.0 27.0 41.0 34 35.560954256714474 38.0 34.0 40.0 26.0 41.0 35 35.386551551208306 38.0 34.0 40.0 25.0 41.0 36 35.27469316287779 38.0 34.0 40.0 25.0 41.0 37 35.19233593000856 38.0 34.0 40.0 25.0 41.0 38 35.06758928035642 38.0 34.0 40.0 24.0 41.0 39 34.922568479603996 38.0 34.0 40.0 24.0 41.0 40 34.80635124063599 38.0 33.0 40.0 24.0 41.0 41 34.57164166126798 38.0 33.0 40.0 23.0 41.0 42 34.38381597977851 38.0 33.0 40.0 22.0 41.0 43 34.090696822144686 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 22.0 11 61.0 12 72.0 13 110.0 14 152.0 15 278.0 16 506.0 17 821.0 18 1394.0 19 2686.0 20 5042.0 21 9137.0 22 15525.0 23 24979.0 24 37026.0 25 51967.0 26 69680.0 27 91524.0 28 118523.0 29 147937.0 30 182619.0 31 223001.0 32 273009.0 33 331141.0 34 405424.0 35 498791.0 36 633809.0 37 834031.0 38 1274974.0 39 1298210.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.09444533572059 21.256568739230698 13.028178069626492 25.620807855422218 2 18.99129515759463 23.372143647044847 33.74318939155503 23.89337180380549 3 19.04109266101448 25.67380476806885 30.374808494691734 24.91029407622493 4 14.396331180799383 16.751968937869616 34.9115554701019 33.9401444112291 5 12.831682295295982 39.56839510285259 34.341050287977446 13.258872313873985 6 33.58274437669385 38.1732689818347 14.9412257809314 13.302760860540047 7 28.238460389170626 32.306654648726294 21.332436069986542 18.122448892116534 8 27.19352415079413 35.820202998688394 19.256172563580986 17.73010028693649 9 27.6751347425838 14.123371056766398 18.387739618912093 39.81375458173771 10 16.179397151699145 27.909533565935995 33.29779794919399 22.61327133317086 11 36.92654033949865 22.609352439572497 20.63543941206799 19.828667808860864 12 21.236162937798586 26.41788938188026 29.680689774259484 22.66525790606167 13 29.953848904608005 20.323076037557698 24.838758959876653 24.884316097957644 14 22.38348027143237 21.286572768343177 24.78762964496049 31.54231731526397 15 24.976639720190995 28.7436761916192 21.74514455206434 24.534539536125465 16 24.540846505510334 26.871470699534754 24.243576994624995 24.34410580032992 17 23.777044958282154 27.331190596614814 24.852322005689746 24.039442439413293 18 24.313826224011308 25.716055339676224 25.94958159687566 24.020536839436808 19 24.770790649030015 26.18506730087428 25.608209224830595 23.43593282526511 20 24.40262896527738 25.26648476468881 25.70483444511528 24.62605182491853 21 24.82675734823166 26.05118197504889 25.600922532046138 23.521138144673305 22 24.830324153733297 25.46218451375715 25.150601856330912 24.556889476178636 23 23.638429405418115 25.47640581122935 25.747712652025516 25.13745213132702 24 23.98917038247177 26.104944296601463 25.541144096492957 24.36474122443381 25 24.574784736399298 25.23461313784586 25.144279578767925 25.04632254698692 26 24.342192278065095 25.96648182551861 25.56912744609378 24.122198450322514 27 25.027371022476082 25.720387554083796 24.92650543685254 24.32573598658759 28 24.15575397675851 26.125304173499213 25.482284151626892 24.23665769811538 29 24.290022007036864 25.99553674758774 25.795749714961723 23.91869153041368 30 24.438006164909492 26.21280571962521 25.53387271188662 23.815315403578687 31 24.895889080615316 25.55072701599521 25.25849389571089 24.294890007678582 32 23.930233896715112 26.003711314703075 25.14663703819819 24.919417750383623 33 23.928106059956622 25.47038969722873 25.580210567051658 25.02129367576299 34 24.60814125651975 25.659154841609343 25.853874867278098 23.87882903459281 35 24.823619171717347 25.684872580848612 25.775956240654356 23.715552006779685 36 24.214292449884088 25.869489208959077 25.71248853417459 24.203729806982246 37 24.447145147246303 25.69814477127745 25.873010089926364 23.981699991549885 38 24.291108887683286 25.120980531671393 26.11267492655136 24.475235654093957 39 24.50280568288558 25.065549618703898 25.85575777318668 24.575886925223838 40 24.570513754704205 25.228887879229493 26.221301758481037 23.979296607585262 41 23.568011786072496 25.68204056789667 26.50110463813304 24.248843007897793 42 24.56096145155819 25.572112540826915 26.389309013332813 23.477616994282087 43 23.96158504550203 24.79457955782634 26.22759341968779 25.01624197698385 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1575.0 1 1446.0 2 1317.0 3 1389.0 4 1461.0 5 1461.0 6 2040.0 7 2619.0 8 3172.0 9 3725.0 10 5229.5 11 6734.0 12 6734.0 13 13271.5 14 19809.0 15 30175.0 16 40541.0 17 36262.0 18 31983.0 19 31983.0 20 39729.5 21 47476.0 22 46668.0 23 45860.0 24 56091.0 25 66322.0 26 66322.0 27 80353.5 28 94385.0 29 108407.5 30 122430.0 31 140461.5 32 158493.0 33 158493.0 34 183553.0 35 208613.0 36 242356.5 37 276100.0 38 311076.0 39 346052.0 40 346052.0 41 369572.0 42 393092.0 43 414448.5 44 435805.0 45 471154.0 46 506503.0 47 506503.0 48 559866.0 49 613229.0 50 606147.0 51 599065.0 52 560738.0 53 522411.0 54 522411.0 55 497472.0 56 472533.0 57 445404.5 58 418276.0 59 384683.0 60 351090.0 61 351090.0 62 298805.5 63 246521.0 64 211959.5 65 177398.0 66 148735.0 67 120072.0 68 120072.0 69 96564.0 70 73056.0 71 62992.0 72 52928.0 73 41607.0 74 30286.0 75 30286.0 76 23180.0 77 16074.0 78 13671.5 79 11269.0 80 8446.0 81 5623.0 82 5623.0 83 4690.5 84 3758.0 85 3202.0 86 2646.0 87 2575.5 88 2505.0 89 2505.0 90 1753.5 91 1002.0 92 878.5 93 755.0 94 736.0 95 717.0 96 717.0 97 424.5 98 132.0 99 173.5 100 215.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 6532456.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.681375734258616 #Duplication Level Percentage of deduplicated Percentage of total 1 81.02275876720802 41.063448801070656 2 9.814254226900578 9.94799812050168 3 3.3266143333156895 5.057921728492281 4 1.626486990806333 3.297303932317576 5 0.9402878786829996 2.382754163895104 6 0.6141230254509976 1.8674759879965006 7 0.44512896702572263 1.579182389962314 8 0.3046681539413363 1.2352800947331048 9 0.2437581244908752 1.111859738604021 >10 1.4803770790684645 13.985318873795466 >50 0.11057876276921494 3.845070790019474 >100 0.059166718431399305 5.74283361402776 >500 0.005959018627653268 2.1404110627551236 >1k 0.005444723267163323 5.042285805432321 >5k 3.024846258251607E-4 1.0047962763708815 >10k+ 9.074538774754821E-5 0.6960586200256855 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 20278 0.3104192358892276 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 14243 0.21803438094340016 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10883 0.16659890246486161 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 8947 0.1369622696272275 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 8752 0.13397717489409802 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 7928 0.12136323612436119 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7576 0.11597475742660954 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.5308178118612663E-5 2 0.0 0.0 0.0 0.0 1.5308178118612663E-5 3 0.0 0.0 0.0 0.0 1.5308178118612663E-5 4 0.0 0.0 0.0 0.0 1.5308178118612663E-5 5 0.0 0.0 0.0 0.0 1.5308178118612663E-5 6 0.0 0.0 0.0 0.0 3.0616356237225326E-5 7 0.0 0.0 0.0 0.0 3.0616356237225326E-5 8 0.0 0.0 0.0 1.5308178118612663E-5 4.592453435583799E-5 9 0.0 0.0 0.0 1.5308178118612663E-5 7.654089059306331E-5 10 0.0 0.0 0.0 1.5308178118612663E-5 7.654089059306331E-5 11 0.0 0.0 0.0 1.5308178118612663E-5 7.654089059306331E-5 12 0.0 0.0 0.0 1.5308178118612663E-5 7.654089059306331E-5 13 0.0 0.0 0.0 1.5308178118612663E-5 9.184906871167598E-5 14 0.0 0.0 0.0 1.5308178118612663E-5 1.6838995930473929E-4 15 0.0 1.5308178118612663E-5 0.0 3.0616356237225326E-5 1.6838995930473929E-4 16 0.0 1.5308178118612663E-5 0.0 9.184906871167598E-5 2.2962267177918994E-4 17 0.0 1.5308178118612663E-5 0.0 1.5308178118612662E-4 2.2962267177918994E-4 18 0.0 1.5308178118612663E-5 0.0 1.6838995930473929E-4 2.449308498978026E-4 19 0.0 1.5308178118612663E-5 0.0 2.449308498978026E-4 2.449308498978026E-4 20 0.0 1.5308178118612663E-5 0.0 3.3677991860947857E-4 2.449308498978026E-4 21 0.0 1.5308178118612663E-5 0.0 5.051698779142179E-4 2.6023902801641525E-4 22 0.0 1.5308178118612663E-5 0.0 8.266416184050838E-4 2.6023902801641525E-4 23 0.0 1.5308178118612663E-5 0.0 0.0013471196744379143 3.520880967280912E-4 24 0.0 1.5308178118612663E-5 0.0 0.0021431449366057726 3.520880967280912E-4 25 0.0 1.5308178118612663E-5 0.0 0.002678931170757216 3.520880967280912E-4 26 0.0 1.5308178118612663E-5 0.0 0.003597421857873976 3.8270445296531656E-4 27 0.0 1.5308178118612663E-5 0.0 0.008143950759101936 3.8270445296531656E-4 28 0.0 1.5308178118612663E-5 0.0 0.016226668805729424 3.8270445296531656E-4 29 0.0 1.5308178118612663E-5 0.0 0.0293763938096177 3.8270445296531656E-4 30 0.0 1.5308178118612663E-5 0.0 0.05145078665665716 3.8270445296531656E-4 31 0.0 1.5308178118612663E-5 0.0 0.13018074672068208 3.8270445296531656E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1995 0.0 18.175438 5 CAAGACG 2215 0.0 16.954853 4 GACGGAC 2275 0.0 15.125275 7 ACGGACC 2295 0.0 14.912854 8 TTAGAGT 1230 0.0 14.890244 4 GCGCAAG 2345 0.0 14.752665 1 TATACCG 265 0.0 14.660377 5 GGTTATC 1045 0.0 14.5167465 2 TACCGTC 1645 0.0 14.5076 7 ACCGTCG 1595 0.0 14.498432 8 CCGTCGT 1560 0.0 14.467949 9 CGAGCCG 1625 0.0 14.344617 15 AGACGGA 2475 0.0 14.202021 6 CGCAAGA 2475 0.0 14.202021 2 GTATTAG 1770 0.0 14.110169 1 CGGACCA 2455 0.0 14.09165 9 AGGTTAT 1130 0.0 14.079646 1 TAGAGTG 1255 0.0 14.0039835 5 ACGCGTA 135 6.5777804E-6 13.703703 6 CGAACGA 905 0.0 13.696134 16 >>END_MODULE