##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727160.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3802584 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.040771485915894 31.0 31.0 33.0 30.0 34.0 2 31.1358962747437 31.0 31.0 34.0 28.0 34.0 3 31.203550533005977 31.0 31.0 34.0 28.0 34.0 4 35.02031487009886 35.0 35.0 37.0 32.0 37.0 5 34.86173480980302 35.0 35.0 37.0 32.0 37.0 6 34.947858614037195 35.0 35.0 37.0 32.0 37.0 7 34.7538400203651 35.0 35.0 37.0 32.0 37.0 8 34.73202143594987 35.0 35.0 37.0 31.0 37.0 9 36.31201414617008 38.0 35.0 39.0 32.0 39.0 10 36.10161984587323 38.0 35.0 39.0 31.0 39.0 11 36.23119647061051 38.0 35.0 39.0 32.0 39.0 12 36.117231861281695 38.0 35.0 39.0 31.0 39.0 13 36.21173470461139 38.0 35.0 39.0 32.0 39.0 14 37.12546836572184 39.0 36.0 40.0 31.0 41.0 15 37.028331787016405 39.0 36.0 40.0 31.0 41.0 16 36.954461755479954 39.0 36.0 40.0 31.0 41.0 17 36.943705911559086 39.0 36.0 40.0 31.0 41.0 18 36.94212987799875 38.0 36.0 40.0 31.0 41.0 19 36.950162573660435 39.0 36.0 40.0 31.0 41.0 20 36.91293788644774 39.0 36.0 40.0 31.0 41.0 21 36.771494068244124 39.0 35.0 40.0 30.0 41.0 22 36.76660712820545 39.0 35.0 40.0 30.0 41.0 23 36.54913737605796 38.0 35.0 40.0 30.0 41.0 24 36.42010801076321 38.0 35.0 40.0 30.0 41.0 25 36.35009220046158 38.0 35.0 40.0 30.0 41.0 26 35.978347092398224 38.0 34.0 40.0 29.0 41.0 27 36.095784603311856 38.0 35.0 40.0 29.0 41.0 28 35.94285333341749 38.0 34.0 40.0 29.0 41.0 29 35.84285238669284 38.0 34.0 40.0 28.0 41.0 30 35.88905202357134 38.0 34.0 40.0 29.0 41.0 31 35.772149149104926 38.0 34.0 40.0 28.0 41.0 32 35.48107760407134 38.0 34.0 40.0 27.0 41.0 33 35.412116602815345 38.0 34.0 40.0 27.0 41.0 34 35.37883817951162 38.0 34.0 40.0 27.0 41.0 35 35.08464586186656 38.0 33.0 40.0 25.0 41.0 36 34.91604445818948 38.0 33.0 40.0 25.0 41.0 37 34.657779026051756 38.0 33.0 40.0 24.0 41.0 38 34.47252105410426 38.0 33.0 40.0 24.0 41.0 39 34.356083915568995 38.0 33.0 40.0 23.0 41.0 40 34.171038693688295 38.0 33.0 40.0 22.0 41.0 41 33.979681974152314 37.0 33.0 40.0 21.0 41.0 42 33.772083141358614 37.0 33.0 40.0 20.0 41.0 43 33.29082013704365 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 8.0 14 12.0 15 60.0 16 162.0 17 343.0 18 723.0 19 1436.0 20 2847.0 21 5141.0 22 8687.0 23 14173.0 24 22275.0 25 33089.0 26 47575.0 27 65344.0 28 88106.0 29 112661.0 30 138843.0 31 166800.0 32 195081.0 33 229682.0 34 272422.0 35 321228.0 36 389879.0 37 498296.0 38 631493.0 39 556215.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 43.34665585296735 19.376955249377794 12.711145894475967 24.565243003178892 2 15.815061547621301 26.688220431159444 31.886028027257257 25.610689993961998 3 22.639499876925797 27.270193110789926 29.024657969422897 21.06564904286138 4 16.536860198223103 18.221767093113524 30.69594254854068 34.5454301601227 5 13.616924701729141 38.65013895814005 33.0746408231876 14.658295516943214 6 33.24657653848015 31.333693088699683 17.441955259896954 17.97777511292321 7 24.620757884638444 31.57781655842448 23.704880681136828 20.096544875800245 8 28.365185358166972 31.280334635605684 23.547908474868667 16.806571531358678 9 28.04516612913745 13.877063596754208 20.74620836778359 37.33156190632475 10 18.518538972446105 28.00945357157133 32.753227805092536 20.718779650890028 11 32.28012846001561 23.315855744409593 20.33456723112494 24.069448564449857 12 21.302119821679153 28.912786673483083 29.485476191978925 20.299617312858835 13 31.342634377044664 19.06848080147605 25.64122186386941 23.94766295760988 14 22.64865154852595 22.766545065145174 27.022414232006447 27.56238915432243 15 28.454124879292607 24.303605127460695 24.758821895847667 22.48344809739903 16 21.608332649587755 25.43359988891764 30.609396136942667 22.348671324551937 17 24.28390799519485 27.86021294993089 27.85090349088935 20.00497556398491 18 24.463733082556494 21.841831764926166 31.410667062187187 22.283768090330156 19 22.980662623100503 29.474036602478737 29.032073979167848 18.513226795252912 20 22.698801656978517 24.485455153653408 30.693733524361328 22.122009665006743 21 21.1765736141529 28.03354245428898 29.360429644683723 21.4294542868744 22 22.46940501511604 27.97852723306047 25.42223919313814 24.129828558685357 23 19.513941046404234 26.65221859661746 28.574648186601532 25.259192170376778 24 20.633074772312725 31.478463066167638 27.11272124429072 20.775740917228916 25 22.908211889599283 26.327728723415444 24.76218802793048 26.00187135905479 26 21.937030187893285 26.93952322946712 28.559132421532308 22.564314161107287 27 23.800631360148785 26.130731102850064 26.179750401306055 23.888887135695096 28 21.25089149904381 27.258727223382838 29.522792921865765 21.967588355707594 29 22.58661478615594 25.227424298845207 29.593692078860062 22.592268836138793 30 20.8004083538983 29.182787283594525 30.292190783951124 19.724613578556056 31 24.68871167606028 26.267559112435123 25.237654184628138 23.80607502687646 32 18.221767093113524 28.536384732066406 29.037517645895527 24.20433052892454 33 21.186093456449616 27.473949293427836 29.409896007556966 21.930061242565582 34 20.110298681107373 27.241160221575644 28.97895220723592 23.669588890081062 35 19.879666037620733 29.454155384864606 30.61278856693238 20.053390010582277 36 22.754053559369105 27.376647037908956 27.445573851885978 22.423725550835957 37 20.560624038811504 28.010952552264463 29.106681141034624 22.321742267889412 38 21.93881844556228 27.159768199729445 29.114281236127855 21.78713211858042 39 22.146650803769226 23.900274129381494 28.756340425352867 25.196734641496416 40 21.234376413512496 26.689114559993943 29.608077033932716 22.46843199256085 41 19.946751998114966 26.047314142172795 29.785088245256386 24.220845614455854 42 21.911836793085964 27.20839302958199 29.13652926536271 21.743240911969334 43 20.92179949213482 24.114207601988543 30.56908144566958 24.39491146020706 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1155.0 1 1320.0 2 1485.0 3 5453.0 4 9421.0 5 9421.0 6 14460.0 7 19499.0 8 19761.5 9 20024.0 10 24521.5 11 29019.0 12 29019.0 13 43260.5 14 57502.0 15 76455.0 16 95408.0 17 84525.0 18 73642.0 19 73642.0 20 72068.5 21 70495.0 22 57470.5 23 44446.0 24 44849.5 25 45253.0 26 45253.0 27 46456.5 28 47660.0 29 48647.5 30 49635.0 31 52755.5 32 55876.0 33 55876.0 34 64257.0 35 72638.0 36 86080.5 37 99523.0 38 113361.5 39 127200.0 40 127200.0 41 139945.0 42 152690.0 43 172433.5 44 192177.0 45 235333.5 46 278490.0 47 278490.0 48 457070.5 49 635651.0 50 622584.0 51 609517.0 52 424494.0 53 239471.0 54 239471.0 55 209521.5 56 179572.0 57 171465.0 58 163358.0 59 151484.5 60 139611.0 61 139611.0 62 116604.5 63 93598.0 64 80436.0 65 67274.0 66 56811.0 67 46348.0 68 46348.0 69 38929.0 70 31510.0 71 27066.0 72 22622.0 73 16992.0 74 11362.0 75 11362.0 76 8883.0 77 6404.0 78 5698.5 79 4993.0 80 4066.5 81 3140.0 82 3140.0 83 2633.5 84 2127.0 85 1893.0 86 1659.0 87 1129.5 88 600.0 89 600.0 90 429.5 91 259.0 92 197.5 93 136.0 94 129.0 95 122.0 96 122.0 97 64.5 98 7.0 99 6.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3802584.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.98939166926814 #Duplication Level Percentage of deduplicated Percentage of total 1 83.53759215962727 31.735423076596632 2 8.185874246057722 6.219527657777235 3 2.826470491891179 3.221276836742489 4 1.4235837498072212 2.163243225817278 5 0.842918910368696 1.6010988315714556 6 0.5741495188442781 1.3086954568858276 7 0.41503392487291946 1.103682042962166 8 0.29835027983149043 0.9067316508123391 9 0.2328511984179308 0.7961287839621519 >10 1.3954247803809137 9.709668816640098 >50 0.120058936778262 3.1998167932617525 >100 0.11549000763978283 9.294668897721532 >500 0.01789771565107945 4.580675595586192 >1k 0.011415078486093896 8.573967032613947 >5k 0.0014797323963455051 4.296740683776705 >10k+ 0.0014092689489004812 11.288654617272275 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 45709 1.2020510263547104 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 45118 1.1865089633785868 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 34772 0.9144308186222843 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 30579 0.8041636950031874 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 26255 0.6904515455805842 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 21963 0.5775809291786848 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 21460 0.5643530820094966 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 20158 0.5301132072296102 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 19399 0.5101530958947916 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 18401 0.48390778481159125 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 17480 0.45968741255945955 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16572 0.43580891309698877 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGT 15797 0.4154280352518182 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 14095 0.370668997713134 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCTGT 13544 0.3561788510128902 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 13366 0.3514978235852252 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 12566 0.3304594980676298 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 12392 0.32588366226755283 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC 12000 0.3155748827639311 No Hit GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGC 10086 0.265240688963084 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT 9984 0.26255830245959066 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCT 9953 0.2617430673457838 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGTCT 9837 0.25869251014573247 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCT 9546 0.25103981923870716 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTC 9501 0.24985641342834242 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 8792 0.23121119743837346 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 8731 0.22960702511765682 No Hit CCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCA 7854 0.20654376076899286 No Hit GCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 7697 0.20241498938616478 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT 7586 0.19949592172059843 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATC 7503 0.1973131954481479 No Hit GTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG 7255 0.19079131453769332 No Hit CATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGT 7252 0.19071242081700235 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGCTGTCT 7187 0.1890030568686977 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7075 0.18605769129623437 No Hit ACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAG 6341 0.16675502763384056 No Hit TACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC 6165 0.16212659601996957 No Hit GATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTT 6112 0.16073280695442888 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCTGT 5850 0.15384275534741637 No Hit GGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGT 5253 0.13814290492991083 No Hit TGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCT 5040 0.13254145076085103 No Hit GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTG 4997 0.1314106407642803 No Hit ATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTG 4995 0.1313580449504863 No Hit CTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT 4978 0.1309109805332374 No Hit GCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAA 4902 0.12891233960906584 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGCTGT 4887 0.12851787100561093 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGT 4811 0.12651923008143937 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4734 0.1244942912503708 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACCTGTC 4707 0.12378424776415195 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4595 0.1208388821916886 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 4511 0.11862985801234108 No Hit AAAAAGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 4507 0.1185246663847531 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTC 4492 0.11813019778129819 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGG 4427 0.11642083383299356 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4350 0.11439589500192501 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAA 4345 0.11426440546744004 No Hit TTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTC 4237 0.11142423152256464 No Hit AACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACA 4019 0.1056912878190199 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.259581379398851E-5 2 0.0 0.0 0.0 0.0 7.889372069098277E-5 3 0.0 0.0 0.0 0.0 7.889372069098277E-5 4 0.0 0.0 0.0 2.6297906896994255E-5 7.889372069098277E-5 5 0.0 0.0 0.0 2.6297906896994255E-5 7.889372069098277E-5 6 0.0 0.0 0.0 2.6297906896994255E-5 1.3148953448497127E-4 7 0.0 0.0 0.0 2.6297906896994255E-5 1.3148953448497127E-4 8 2.6297906896994255E-5 0.0 0.0 2.6297906896994255E-5 1.3148953448497127E-4 9 2.6297906896994255E-5 0.0 0.0 2.6297906896994255E-5 1.5778744138196554E-4 10 5.259581379398851E-5 0.0 0.0 1.3148953448497127E-4 1.5778744138196554E-4 11 5.259581379398851E-5 0.0 0.0 2.366811620729483E-4 1.5778744138196554E-4 12 5.259581379398851E-5 2.6297906896994255E-5 0.0 4.207665103519081E-4 1.5778744138196554E-4 13 5.259581379398851E-5 5.259581379398851E-5 0.0 6.574476724248564E-4 1.5778744138196554E-4 14 5.259581379398851E-5 5.259581379398851E-5 0.0 0.0010782141827767645 2.366811620729483E-4 15 7.889372069098277E-5 5.259581379398851E-5 0.0 0.0017093639483046264 2.6297906896994254E-4 16 7.889372069098277E-5 5.259581379398851E-5 0.0 0.0040498776621371154 2.6297906896994254E-4 17 7.889372069098277E-5 5.259581379398851E-5 0.0 0.0068637537001155005 2.6297906896994254E-4 18 7.889372069098277E-5 5.259581379398851E-5 0.0 0.00951984229671192 3.1557488276393107E-4 19 7.889372069098277E-5 5.259581379398851E-5 0.0 0.014884615303698749 3.1557488276393107E-4 20 7.889372069098277E-5 5.259581379398851E-5 0.0 0.019276365755496787 3.1557488276393107E-4 21 7.889372069098277E-5 5.259581379398851E-5 0.0 0.029585145259118536 3.1557488276393107E-4 22 7.889372069098277E-5 5.259581379398851E-5 0.0 0.044364568935229304 3.1557488276393107E-4 23 7.889372069098277E-5 5.259581379398851E-5 0.0 0.0645087656183269 3.418727896609253E-4 24 7.889372069098277E-5 5.259581379398851E-5 0.0 0.09230565320844983 3.418727896609253E-4 25 7.889372069098277E-5 5.259581379398851E-5 0.0 0.11092457129152176 3.418727896609253E-4 26 7.889372069098277E-5 5.259581379398851E-5 0.0 0.14626895816108204 3.418727896609253E-4 27 7.889372069098277E-5 5.259581379398851E-5 0.0 0.2169051360864086 3.418727896609253E-4 28 7.889372069098277E-5 5.259581379398851E-5 0.0 0.3486050538265558 3.418727896609253E-4 29 7.889372069098277E-5 5.259581379398851E-5 0.0 0.45979260418704754 3.6817069655791955E-4 30 7.889372069098277E-5 5.259581379398851E-5 0.0 0.6462184661798398 3.6817069655791955E-4 31 7.889372069098277E-5 5.259581379398851E-5 0.0 1.0150992062239783 3.6817069655791955E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAAAGTA 2110 0.0 19.464455 2 AAAAAGT 2070 0.0 19.304348 1 GGGCTGT 3665 0.0 16.758528 37 TGGGCTG 3520 0.0 16.713068 36 AAAGTAC 2510 0.0 16.288845 3 AGTACTC 2515 0.0 16.25646 5 TACACCG 115 1.243965E-6 16.086956 5 CTATACG 70 0.0025939704 15.857142 4 TATACGG 70 0.0025939704 15.857142 2 AAGTACT 2645 0.0 15.807183 4 ATACTAG 110 1.453543E-5 15.136364 1 CCTATAC 185 3.0559022E-10 15.000001 3 TATCACG 160 1.786666E-7 13.875 2 GCGAGTA 80 0.006302149 13.875 2 GCGGGTA 360 0.0 13.361111 23 CGGGTAA 365 0.0 13.178082 24 CGAGCCG 765 0.0 13.058824 15 CTTATAC 4120 0.0 12.976941 37 TAGGACT 260 2.3646862E-11 12.807693 4 TCTAGAT 610 0.0 12.737705 2 >>END_MODULE