##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727157.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5613804 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.485232651514018 31.0 31.0 34.0 30.0 34.0 2 31.696813782597324 31.0 31.0 34.0 30.0 34.0 3 31.8676674497364 31.0 31.0 34.0 30.0 34.0 4 35.578137747595036 37.0 35.0 37.0 33.0 37.0 5 35.380397142472376 37.0 35.0 37.0 33.0 37.0 6 35.40094898218748 37.0 35.0 37.0 33.0 37.0 7 35.292163744940154 37.0 35.0 37.0 32.0 37.0 8 35.26848390146859 37.0 35.0 37.0 32.0 37.0 9 36.775918788757146 39.0 37.0 39.0 32.0 39.0 10 36.574121219764706 39.0 35.0 39.0 32.0 39.0 11 36.64639253525773 39.0 35.0 39.0 32.0 39.0 12 36.48074888257588 38.0 35.0 39.0 32.0 39.0 13 36.48173555756489 38.0 35.0 39.0 32.0 39.0 14 37.429101372260234 39.0 36.0 41.0 32.0 41.0 15 37.36546983115193 39.0 36.0 41.0 32.0 41.0 16 37.273023603959096 39.0 36.0 41.0 31.0 41.0 17 37.6143867865711 39.0 36.0 41.0 32.0 41.0 18 37.656335347653744 39.0 37.0 41.0 32.0 41.0 19 37.74917346597779 40.0 37.0 41.0 32.0 41.0 20 37.72928018149547 40.0 37.0 41.0 32.0 41.0 21 37.689604767106225 40.0 37.0 41.0 32.0 41.0 22 37.632988611643725 40.0 37.0 41.0 32.0 41.0 23 37.50918379052778 39.0 37.0 41.0 32.0 41.0 24 37.396747731128485 39.0 36.0 41.0 31.0 41.0 25 37.31302981008956 39.0 36.0 41.0 31.0 41.0 26 37.02875251790052 39.0 36.0 41.0 31.0 41.0 27 36.84622298890378 39.0 36.0 41.0 30.0 41.0 28 36.63061392952088 39.0 36.0 40.0 30.0 41.0 29 36.45230667119835 39.0 35.0 40.0 30.0 41.0 30 36.31131582078747 39.0 35.0 40.0 29.0 41.0 31 36.14434882300843 39.0 35.0 40.0 29.0 41.0 32 35.97594483170413 38.0 35.0 40.0 27.0 41.0 33 35.809920510228004 38.0 35.0 40.0 27.0 41.0 34 35.69154053116211 38.0 35.0 40.0 27.0 41.0 35 35.52838912794248 38.0 34.0 40.0 26.0 41.0 36 35.41380283315912 38.0 34.0 40.0 25.0 41.0 37 35.33740900109801 38.0 34.0 40.0 25.0 41.0 38 35.22156420138644 38.0 34.0 40.0 25.0 41.0 39 35.07320561957631 38.0 34.0 40.0 24.0 41.0 40 34.97298302541378 38.0 34.0 40.0 24.0 41.0 41 34.74412323622271 38.0 33.0 40.0 23.0 41.0 42 34.56142679723054 38.0 33.0 40.0 23.0 41.0 43 34.27685683361941 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 8.0 10 7.0 11 38.0 12 71.0 13 60.0 14 119.0 15 211.0 16 353.0 17 550.0 18 1089.0 19 2120.0 20 3870.0 21 7081.0 22 12347.0 23 20063.0 24 29533.0 25 41805.0 26 56822.0 27 75391.0 28 97780.0 29 122998.0 30 153279.0 31 188528.0 32 231408.0 33 282120.0 34 347422.0 35 427974.0 36 544248.0 37 716288.0 38 1087180.0 39 1163041.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.07377172412859 21.095535219968493 13.147448681856366 25.68324437404655 2 18.83042229475771 23.299798140440956 34.21309329645282 23.65668626834852 3 18.905736644884648 25.7064372037214 30.44158648930387 24.946239662090093 4 14.453425876642648 16.716401213864966 34.72517031232298 34.1050025971694 5 12.814145274754873 39.75137001576827 34.105145103035305 13.32933960644155 6 33.54196192100758 38.01409881784259 14.979860358502005 13.464078902647831 7 28.243112869633496 32.47776374094999 21.13570406091841 18.14341932849811 8 27.154029602743524 36.23338114405134 19.178635378078752 17.433953875126385 9 28.139457665426153 14.10102668351086 18.20337867157457 39.556136979488414 10 16.21392553070966 28.11033302908331 33.12539946175534 22.550341978451687 11 36.93310275884231 22.70155851540239 20.478662952963802 19.8866757727915 12 21.203216214887448 26.352808184966914 29.656486047606933 22.787489552538705 13 30.042819450055614 20.42627423401316 24.81426141703558 24.71664489889565 14 22.375487280995205 21.138055407705718 24.997844598778297 31.48861271252078 15 25.108625096280523 28.73575564804186 21.79596936408895 24.359649891588663 16 24.344615522736454 26.940591442095236 24.405608033340673 24.309185001827636 17 23.688999473440823 27.30526395292746 24.79320617534919 24.21253039828252 18 23.997595926042305 26.07294447757706 26.06264842876595 23.86681116761469 19 24.907727451831235 26.15278338894625 25.767536593725037 23.171952565497477 20 24.169030482717243 25.306654810178625 25.84110524699473 24.683209460109403 21 24.586412350698385 26.035697006878046 26.08251018382544 23.295380458598128 22 24.846877447092915 25.25016904758342 25.293686776381936 24.60926672894173 23 23.68379800933556 25.538654359860086 26.06995185439321 24.707595776411146 24 23.85400345291713 25.874807884279537 25.86878701144536 24.402401651357973 25 24.448003528445238 25.1746231254244 25.412126964176164 24.9652463819542 26 24.12081006034411 25.851971319269428 25.909383369992966 24.117835250393494 27 25.002137587988464 25.822294472696232 25.02126900048523 24.154298938830067 28 23.9498208345001 26.314955064337838 25.466938282847067 24.268285818314997 29 24.138623293581322 26.19826057340085 26.001442159362888 23.66167397365494 30 24.66717755019591 26.00938686138668 25.570878498786204 23.752557089631203 31 24.763101811178302 25.520662994290504 25.647885106070678 24.068350088460516 32 23.955645761768668 26.033595045356055 25.329402309022548 24.681356883852732 33 23.86551080158837 25.369606776438935 25.739445124909956 25.02543729706274 34 24.466760863044026 25.728151535037565 26.19578453398088 23.609303067937535 35 24.623624194930922 25.666214923071774 25.940609967857803 23.769550914139504 36 24.05791153378351 25.84992279744715 26.0215532996877 24.070612369081644 37 24.188963490709686 25.75750774341249 26.30980703993228 23.743721725945544 38 24.445545302258502 24.99130714218024 26.206632793022344 24.356514762538914 39 24.121647282306256 25.263546785744566 26.27068917974336 24.344116752205814 40 24.57844983544135 25.116908249735832 26.501156791366427 23.803485123456394 41 23.35199091382599 25.69918721779385 26.721809311475788 24.227012556904373 42 24.170170529644427 25.647742600204783 26.63350911431892 23.54857775583187 43 23.526346840751835 24.906658657837003 26.465868776323504 25.10112572508766 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2117.0 1 1975.0 2 1833.0 3 1853.0 4 1873.0 5 1873.0 6 2458.5 7 3044.0 8 3683.5 9 4323.0 10 5784.5 11 7246.0 12 7246.0 13 14111.5 14 20977.0 15 31092.5 16 41208.0 17 36787.0 18 32366.0 19 32366.0 20 38921.0 21 45476.0 22 42705.5 23 39935.0 24 48478.0 25 57021.0 26 57021.0 27 69054.5 28 81088.0 29 92595.5 30 104103.0 31 118840.5 32 133578.0 33 133578.0 34 154877.5 35 176177.0 36 204490.0 37 232803.0 38 261756.5 39 290710.0 40 290710.0 41 312017.0 42 333324.0 43 350810.5 44 368297.0 45 402393.0 46 436489.0 47 436489.0 48 478096.0 49 519703.0 50 519874.0 51 520045.0 52 489997.0 53 459949.0 54 459949.0 55 436359.0 56 412769.0 57 388754.0 58 364739.0 59 333198.0 60 301657.0 61 301657.0 62 256190.0 63 210723.0 64 180171.0 65 149619.0 66 124801.5 67 99984.0 68 99984.0 69 80270.0 70 60556.0 71 51300.0 72 42044.0 73 32953.5 74 23863.0 75 23863.0 76 18330.0 77 12797.0 78 10635.0 79 8473.0 80 6431.0 81 4389.0 82 4389.0 83 3633.0 84 2877.0 85 2381.0 86 1885.0 87 1794.5 88 1704.0 89 1704.0 90 1227.0 91 750.0 92 611.5 93 473.0 94 518.5 95 564.0 96 564.0 97 328.0 98 92.0 99 126.5 100 161.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5613804.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.70485013372057 #Duplication Level Percentage of deduplicated Percentage of total 1 80.89291335318586 41.82555961806518 2 9.817826358159792 10.152584809750872 3 3.4499525008515817 5.351378310749564 4 1.62677447711866 3.3644852216312784 5 0.9451976448601123 2.443565128711887 6 0.6202993561261728 1.9243491147928278 7 0.4461777512261417 1.6148687632103678 8 0.34332437008002203 1.4201228081793245 9 0.2441297941380464 1.1360424977175367 >10 1.4411525876912894 13.813937659884912 >50 0.10221621188748382 3.6154563616572615 >100 0.059041206941967836 5.867801551072694 >500 0.006638128915297705 2.4369026026564717 >1k 0.004114244438713628 3.719905303732755 >5k 1.3829393070982878E-4 0.4434540848006305 >10k+ 1.0372044803237161E-4 0.8695861633864097 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 21050 0.3749685596433363 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15456 0.27532133291436606 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12139 0.21623483826653014 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7857 0.13995857354478353 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 6286 0.11197398412912171 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 5642 0.10050226192435646 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.7813233237213126E-5 0.0 5 0.0 0.0 0.0 1.7813233237213126E-5 0.0 6 3.562646647442625E-5 0.0 0.0 1.7813233237213126E-5 1.7813233237213126E-5 7 3.562646647442625E-5 0.0 0.0 3.562646647442625E-5 3.562646647442625E-5 8 3.562646647442625E-5 0.0 0.0 3.562646647442625E-5 5.343969971163938E-5 9 3.562646647442625E-5 0.0 0.0 5.343969971163938E-5 7.12529329488525E-5 10 3.562646647442625E-5 0.0 0.0 1.42505865897705E-4 7.12529329488525E-5 11 3.562646647442625E-5 0.0 0.0 1.42505865897705E-4 8.906616618606563E-5 12 3.562646647442625E-5 0.0 0.0 1.42505865897705E-4 1.0687939942327876E-4 13 3.562646647442625E-5 0.0 0.0 1.6031909913491815E-4 1.0687939942327876E-4 14 3.562646647442625E-5 0.0 0.0 1.6031909913491815E-4 2.1375879884655752E-4 15 3.562646647442625E-5 0.0 0.0 1.7813233237213126E-4 2.493852653209838E-4 16 5.343969971163938E-5 0.0 0.0 2.3157203208377066E-4 3.562646647442625E-4 17 5.343969971163938E-5 0.0 0.0 2.8501173179541E-4 3.7407789798147564E-4 18 5.343969971163938E-5 0.0 0.0 3.206381982698363E-4 3.918911312186888E-4 19 5.343969971163938E-5 0.0 0.0 4.4533083093032815E-4 3.918911312186888E-4 20 5.343969971163938E-5 0.0 0.0 5.343969971163938E-4 3.918911312186888E-4 21 5.343969971163938E-5 0.0 0.0 7.12529329488525E-4 4.097043644559019E-4 22 5.343969971163938E-5 0.0 0.0 9.79727828046722E-4 4.097043644559019E-4 23 5.343969971163938E-5 0.0 0.0 0.0014428718922142633 6.056499300652463E-4 24 5.343969971163938E-5 0.0 0.0 0.002262280621126067 6.234631633024594E-4 25 5.343969971163938E-5 0.0 0.0 0.0028857437844285266 6.412763965396726E-4 26 5.343969971163938E-5 0.0 0.0 0.0040614171780845925 6.590896297768857E-4 27 5.343969971163938E-5 0.0 0.0 0.01173892070332345 6.590896297768857E-4 28 5.343969971163938E-5 0.0 0.0 0.026452651357261492 6.590896297768857E-4 29 5.343969971163938E-5 0.0 0.0 0.047828531241917244 6.769028630140988E-4 30 5.343969971163938E-5 0.0 0.0 0.07898387617380301 6.769028630140988E-4 31 5.343969971163938E-5 0.0 0.0 0.19197321459744587 6.769028630140988E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1560 0.0 16.246796 5 CAAGACG 1730 0.0 16.040462 4 CGAACGA 770 0.0 15.376625 16 TATACTG 855 0.0 15.362573 5 ACGAACG 785 0.0 15.082803 15 CGCAAGA 1855 0.0 14.959569 2 ATACCGT 1345 0.0 14.855019 6 GTATTAG 1295 0.0 14.428571 1 TCGTTAC 990 0.0 14.388889 23 TACCGTC 1280 0.0 14.1640625 7 CGAACGT 420 0.0 14.095238 4 ACGGATG 2075 0.0 14.086747 28 TTAGAGT 975 0.0 14.041025 4 ACGGACC 1780 0.0 13.926966 8 TACGGAT 2060 0.0 13.919902 27 TATGCGA 120 3.304851E-5 13.874999 12 GTTACGG 1565 0.0 13.7124605 25 CGTCGTA 1255 0.0 13.709164 10 GCGCAAG 1960 0.0 13.591836 1 ACCGTCG 1280 0.0 13.5859375 8 >>END_MODULE