##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727153.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5330776 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.484323295520202 31.0 30.0 31.0 28.0 34.0 2 30.896733796355353 31.0 31.0 34.0 28.0 34.0 3 31.243030658200606 31.0 31.0 34.0 28.0 34.0 4 35.138233157799164 35.0 35.0 37.0 33.0 37.0 5 34.86510725642946 35.0 35.0 37.0 32.0 37.0 6 34.72176902574785 35.0 35.0 37.0 32.0 37.0 7 34.60242711380107 35.0 35.0 37.0 30.0 37.0 8 34.57821637975409 35.0 35.0 37.0 30.0 37.0 9 35.96933073158579 37.0 35.0 39.0 30.0 39.0 10 35.795284588960406 37.0 35.0 39.0 30.0 39.0 11 35.77747236049686 37.0 35.0 39.0 30.0 39.0 12 35.58949954002944 37.0 35.0 39.0 30.0 39.0 13 35.690413553298804 37.0 35.0 39.0 30.0 39.0 14 36.49129882778792 38.0 35.0 40.0 30.0 41.0 15 36.4500641182447 38.0 35.0 40.0 30.0 41.0 16 36.310769764101885 38.0 35.0 40.0 30.0 41.0 17 36.21232556010607 38.0 34.0 40.0 30.0 41.0 18 36.05995468577183 38.0 34.0 40.0 29.0 41.0 19 35.977215324748215 38.0 34.0 40.0 28.0 41.0 20 36.41234428158302 38.0 35.0 40.0 30.0 41.0 21 36.48796422884773 38.0 35.0 40.0 30.0 41.0 22 36.443802740914265 38.0 35.0 40.0 30.0 41.0 23 36.351600780074044 38.0 35.0 40.0 30.0 41.0 24 36.17439430957144 38.0 34.0 40.0 29.0 41.0 25 35.86644064578966 38.0 34.0 40.0 27.0 41.0 26 35.64891659300635 38.0 34.0 40.0 27.0 41.0 27 35.47563487942468 38.0 34.0 40.0 27.0 41.0 28 35.195149261570926 38.0 34.0 40.0 26.0 41.0 29 35.02156027565218 38.0 33.0 40.0 25.0 41.0 30 34.70659600028213 38.0 33.0 40.0 24.0 41.0 31 34.57833062203326 38.0 33.0 40.0 24.0 41.0 32 34.394649672017735 38.0 33.0 40.0 24.0 41.0 33 34.32431751024616 38.0 33.0 40.0 24.0 41.0 34 34.12490301599617 37.0 32.0 40.0 23.0 41.0 35 33.7085465605758 37.0 31.0 40.0 21.0 41.0 36 33.693460764436544 37.0 31.0 40.0 21.0 41.0 37 33.54862519077898 37.0 31.0 40.0 20.0 41.0 38 33.42772515671265 37.0 31.0 40.0 19.0 41.0 39 33.29732481724987 37.0 31.0 40.0 19.0 41.0 40 33.08967249796277 37.0 31.0 40.0 18.0 41.0 41 32.89417056728701 37.0 30.0 40.0 16.0 41.0 42 32.73563529962617 37.0 30.0 40.0 15.0 41.0 43 32.627179232441954 37.0 30.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 22.0 11 36.0 12 45.0 13 62.0 14 122.0 15 257.0 16 540.0 17 1051.0 18 2272.0 19 4333.0 20 8145.0 21 13978.0 22 23046.0 23 34635.0 24 49657.0 25 68347.0 26 89640.0 27 116288.0 28 145762.0 29 179279.0 30 217773.0 31 260246.0 32 307368.0 33 360436.0 34 419333.0 35 486726.0 36 566865.0 37 655956.0 38 773458.0 39 545094.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.9231188855056 22.87899547833186 14.763085149329102 26.43480048683344 2 19.08380693542554 24.14458983082388 32.20699950626325 24.56460372748733 3 19.001792609556283 25.753567585657322 30.25435696416432 24.990282840622076 4 15.317300895779526 17.44237611934923 33.417648762581656 33.82267422228959 5 13.204812957813273 39.77972437783917 33.37000091543895 13.645461748908602 6 33.83773769522486 38.16247390623804 14.37396731732866 13.62582108120844 7 28.25933785250027 32.33825619384495 20.968316807909392 18.434089145745386 8 27.44386558354731 36.1709064496426 18.981870556932048 17.403357409878037 9 27.859865055294016 14.525371165473844 18.26709657280666 39.34766720642548 10 16.757747840089323 28.52278917741057 32.28454919133725 22.434913791162863 11 36.984390265132134 22.681669610578272 20.01344644757161 20.320493676717984 12 21.4171820387876 27.282744576024204 28.77361569872754 22.526457686460656 13 30.391016242288178 20.297345076964405 24.452424937757655 24.859213742989763 14 22.699396860794753 21.58586292127075 24.346061436458783 31.36867878147572 15 25.793074028996905 28.559219145580307 20.999175354582523 24.64853147084027 16 24.7597535518281 26.650528928621277 23.973170135079773 24.616547384470856 17 24.355703559856952 27.544263724455874 24.190005357568957 23.910027358118217 18 25.042095184641035 25.01390041524911 25.43575269341649 24.50825170669336 19 25.624937157366958 26.186900368726807 24.707753617859765 23.480408856046473 20 24.707828653839517 24.98187881088982 25.353044284734533 24.957248250536132 21 25.26988566017405 26.26589449641103 24.798565912354974 23.665653931059943 22 25.017370829312657 25.68340894458893 24.230149606736433 25.069070619361984 23 23.884177463093554 25.28052201030394 24.875271442656754 25.960029083945752 24 24.18507174190024 26.507153930309585 24.711655488806883 24.59611883898329 25 24.887858728260202 25.43413941985182 24.231068797488394 25.446933054399583 26 24.968597442473666 25.83621971735447 24.746190798487874 24.448992041683987 27 25.646660073505245 25.636155036339925 23.925522287937063 24.791662602217762 28 24.512547516534177 25.843010473522053 24.925601826075603 24.718840183868167 29 24.636188052171015 25.783600736553176 25.170200361073135 24.41001085020267 30 24.5165994594408 26.292194607314208 25.211413872952082 23.979792060292908 31 25.350305471473572 25.39041220265117 24.26774263259233 24.99153969328293 32 23.745154551607495 26.117585882430628 24.47172794354893 25.665531622412946 33 24.22666043367795 25.228878497239428 25.174477411919018 25.36998365716361 34 24.584994754985015 25.533655887998297 25.40566326553582 24.475686091480863 35 25.124428413424237 25.627094441784838 25.32798226749727 23.920494877293663 36 24.79637110994722 25.603420590172988 25.014650775046636 24.585557524833156 37 24.69355305869164 25.398140908565658 25.272849581374267 24.63545645136843 38 24.700024911945277 24.709273096449746 25.827140363804446 24.76356162780053 39 24.918473407999137 24.335912820197283 25.52134998731892 25.224263784484663 40 24.791943987141835 24.808770805601284 26.038760585700842 24.36052462155604 41 23.689008879757843 25.266771667014332 26.273604443330576 24.770615009897245 42 24.83325129399547 25.168755918462903 26.250831023475758 23.74716176406587 43 24.12971394783799 24.195032768212357 26.243439979470157 25.4318133044795 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 492.0 1 715.0 2 938.0 3 964.0 4 990.0 5 990.0 6 1285.5 7 1581.0 8 2427.0 9 3273.0 10 5351.5 11 7430.0 12 7430.0 13 15692.0 14 23954.0 15 30416.5 16 36879.0 17 31014.0 18 25149.0 19 25149.0 20 30507.5 21 35866.0 22 36070.0 23 36274.0 24 43041.0 25 49808.0 26 49808.0 27 59131.5 28 68455.0 29 78527.0 30 88599.0 31 100324.0 32 112049.0 33 112049.0 34 133441.0 35 154833.0 36 181422.5 37 208012.0 38 236043.5 39 264075.0 40 264075.0 41 283508.0 42 302941.0 43 321755.5 44 340570.0 45 375156.0 46 409742.0 47 409742.0 48 471046.5 49 532351.0 50 527268.5 51 522186.0 52 472320.5 53 422455.0 54 422455.0 55 399085.5 56 375716.0 57 358606.5 58 341497.0 59 316530.0 60 291563.0 61 291563.0 62 249648.5 63 207734.0 64 181118.5 65 154503.0 66 131278.0 67 108053.0 68 108053.0 69 87807.5 70 67562.0 71 60466.0 72 53370.0 73 42633.5 74 31897.0 75 31897.0 76 24583.0 77 17269.0 78 14805.0 79 12341.0 80 9659.5 81 6978.0 82 6978.0 83 5907.5 84 4837.0 85 3937.0 86 3037.0 87 2965.5 88 2894.0 89 2894.0 90 2073.0 91 1252.0 92 951.5 93 651.0 94 595.0 95 539.0 96 539.0 97 310.0 98 81.0 99 90.5 100 100.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5330776.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.45739171597184 #Duplication Level Percentage of deduplicated Percentage of total 1 83.91084422963172 43.17833180742055 2 8.259746184052858 8.50049989734623 3 2.736870598658253 4.224966674132522 4 1.352265815449411 2.7833628707879368 5 0.8185510147276521 2.1060250102173512 6 0.5210252050122866 1.608635884092706 7 0.3898657650283869 1.4043032771398916 8 0.2865113138875851 1.1794499927816982 9 0.20249506916125473 0.9377881284945145 >10 1.3463952267224475 12.8504561162362 >50 0.09689942162008958 3.4324601716908827 >100 0.06297659524275165 6.403519818149841 >500 0.008400392297798332 3.089863190962625 >1k 0.006712973522323205 6.461317020362885 >5k 3.301462388023465E-4 1.1055526306167063 >10k+ 1.1004874626744884E-4 0.7334675095677468 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16291 0.3056027865361441 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 12121 0.2273777776443805 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 10445 0.19593770212817047 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9678 0.1815495530106686 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8146 0.1528107727655411 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 7422 0.13922926043037637 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 6969 0.13073143572342938 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 5729 0.1074702820002191 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 5389 0.10109222372127434 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.8758994938072805E-5 0.0 3 0.0 0.0 0.0 1.8758994938072805E-5 0.0 4 0.0 0.0 0.0 3.751798987614561E-5 0.0 5 0.0 0.0 0.0 3.751798987614561E-5 0.0 6 0.0 0.0 0.0 3.751798987614561E-5 5.6276984814218416E-5 7 0.0 0.0 0.0 3.751798987614561E-5 5.6276984814218416E-5 8 0.0 0.0 0.0 3.751798987614561E-5 5.6276984814218416E-5 9 0.0 0.0 0.0 3.751798987614561E-5 1.1255396962843683E-4 10 0.0 0.0 0.0 3.751798987614561E-5 1.1255396962843683E-4 11 0.0 0.0 0.0 3.751798987614561E-5 1.1255396962843683E-4 12 0.0 0.0 0.0 3.751798987614561E-5 1.1255396962843683E-4 13 0.0 0.0 0.0 7.503597975229122E-5 1.1255396962843683E-4 14 0.0 0.0 0.0 1.3131296456650964E-4 1.3131296456650964E-4 15 0.0 0.0 0.0 2.0634894431880086E-4 1.3131296456650964E-4 16 0.0 0.0 0.0 4.314568835756745E-4 1.6883095444265525E-4 17 0.0 0.0 0.0 6.378058278944754E-4 1.8758994938072805E-4 18 0.0 0.0 0.0 8.441547722132762E-4 1.8758994938072805E-4 19 0.0 0.0 0.0 0.0012380936659128052 1.8758994938072805E-4 20 0.0 0.0 0.0 0.0016507915545504069 1.8758994938072805E-4 21 0.0 0.0 0.0 0.002870126225525139 2.0634894431880086E-4 22 0.0 0.0 0.0 0.004483399790199401 2.0634894431880086E-4 23 0.0 0.0 0.0 0.007972572848680942 3.751798987614561E-4 24 0.0 0.0 0.0 0.014012969218740385 3.939388936995289E-4 25 0.0 0.0 0.0 0.018214984084868695 3.939388936995289E-4 26 0.0 0.0 0.0 0.023354948697900644 3.939388936995289E-4 27 0.0 0.0 0.0 0.03417888877716865 4.126978886376017E-4 28 0.0 0.0 0.0 0.0568397546623606 4.126978886376017E-4 29 0.0 0.0 0.0 0.08572860686699273 4.126978886376017E-4 30 0.0 0.0 0.0 0.1285178743207368 4.126978886376017E-4 31 0.0 0.0 0.0 0.26176301536586793 4.126978886376017E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1825 0.0 17.232878 5 CAAGACG 1895 0.0 16.889183 4 AGGTTAT 1145 0.0 16.641922 1 GGTTATC 1105 0.0 16.574661 2 TTATCTA 1225 0.0 16.159184 4 TTAGAGT 970 0.0 16.020618 4 GTATACG 95 7.067379E-5 15.578948 1 TAGAGTG 1075 0.0 15.144187 5 CACTCTA 1180 0.0 15.050847 9 CGCAAGA 2200 0.0 14.799999 2 CGAACGT 515 0.0 14.728156 4 GTTATCT 1335 0.0 14.550561 3 TCGTTAC 580 0.0 14.353448 23 GCGCAAG 2180 0.0 14.256881 1 ACTCTAA 1240 0.0 14.173388 10 GGACCGT 210 1.364242E-10 14.095239 6 AGACGGA 2280 0.0 14.037281 6 CGAACGA 925 0.0 13.8 16 ACGAACG 925 0.0 13.8 15 GACGGAC 2200 0.0 13.790909 7 >>END_MODULE