##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727152.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2433398 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.38719395676334 31.0 31.0 34.0 30.0 34.0 2 31.639294928326564 31.0 31.0 34.0 30.0 34.0 3 31.747701773404927 31.0 31.0 34.0 30.0 34.0 4 35.51445879383479 37.0 35.0 37.0 33.0 37.0 5 35.06710698373222 37.0 35.0 37.0 32.0 37.0 6 35.07965158186207 36.0 35.0 37.0 32.0 37.0 7 35.03160724221849 36.0 35.0 37.0 32.0 37.0 8 34.97868988139219 36.0 35.0 37.0 32.0 37.0 9 36.79316453781913 39.0 37.0 39.0 33.0 39.0 10 36.528055829749185 38.0 35.0 39.0 32.0 39.0 11 36.66316360907669 38.0 35.0 39.0 32.0 39.0 12 36.523434719680054 38.0 35.0 39.0 32.0 39.0 13 36.67283650270116 38.0 35.0 39.0 32.0 39.0 14 37.65148528929505 39.0 37.0 40.0 32.0 41.0 15 37.657362667348295 39.0 37.0 40.0 32.0 41.0 16 37.590434035040715 39.0 37.0 40.0 32.0 41.0 17 37.50429933779842 39.0 36.0 40.0 32.0 41.0 18 37.51788157958542 39.0 36.0 40.0 32.0 41.0 19 37.56488293324808 39.0 37.0 40.0 32.0 41.0 20 37.435373909241314 39.0 36.0 40.0 32.0 41.0 21 37.42902024247575 39.0 36.0 40.0 32.0 41.0 22 37.32254526386559 39.0 36.0 40.0 32.0 41.0 23 37.25809094936381 39.0 36.0 40.0 32.0 41.0 24 37.14118159051664 39.0 36.0 40.0 31.0 41.0 25 37.11634841485034 39.0 36.0 40.0 31.0 41.0 26 36.956231985067795 39.0 36.0 40.0 31.0 41.0 27 36.75321217490932 39.0 36.0 40.0 30.0 41.0 28 36.62975600374456 39.0 35.0 40.0 30.0 41.0 29 36.5354348117324 38.0 35.0 40.0 30.0 41.0 30 36.4778979846289 38.0 35.0 40.0 30.0 41.0 31 36.42782520574111 38.0 35.0 40.0 30.0 41.0 32 36.315246416739065 38.0 35.0 40.0 30.0 41.0 33 36.28229907314792 38.0 35.0 40.0 30.0 41.0 34 36.26952804267941 38.0 35.0 40.0 30.0 41.0 35 36.163517435290075 38.0 35.0 40.0 30.0 41.0 36 36.070368266925506 38.0 35.0 40.0 29.0 41.0 37 35.920684984536024 38.0 35.0 40.0 29.0 41.0 38 35.87138560975229 38.0 35.0 40.0 29.0 41.0 39 35.75487404855268 38.0 34.0 40.0 28.0 41.0 40 35.67984768623957 38.0 34.0 40.0 28.0 41.0 41 35.610358437049754 38.0 34.0 40.0 27.0 41.0 42 35.54399157063497 38.0 34.0 40.0 27.0 41.0 43 34.19639820530797 37.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 6.0 11 2.0 12 3.0 13 2.0 14 5.0 15 7.0 16 15.0 17 42.0 18 99.0 19 225.0 20 493.0 21 946.0 22 1915.0 23 3551.0 24 5997.0 25 9712.0 26 15116.0 27 22572.0 28 32271.0 29 44643.0 30 60083.0 31 79359.0 32 101337.0 33 129405.0 34 167289.0 35 217786.0 36 293299.0 37 403998.0 38 557690.0 39 285527.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.1400034026493 18.863868549246774 13.018256775093922 25.977871273010006 2 18.534082792868244 21.093836684340168 35.52000124928187 24.852079273509716 3 20.042590648960836 22.814763552859006 30.050406879597997 27.09223891858216 4 15.32996246401123 15.810196276975653 33.88672958554252 34.9731116734706 5 15.538313091405517 35.647148555230174 33.6762420286365 15.13829632472781 6 35.25752877252303 34.10502515412604 15.141214055407296 15.496232017943631 7 28.993571951649503 30.411054829501794 21.366007533498426 19.22936568535028 8 26.259041882996538 35.03795926519213 19.693531432178375 19.00946741963296 9 26.75189179903986 14.862714607310437 19.67306622262367 38.71232737102603 10 17.27929422149603 26.55254093247385 33.0019174832888 23.16624736274132 11 35.5001935565 21.87595288563564 21.400034026492996 21.22381953137136 12 21.30617350716981 24.882859277438378 30.3186737229175 23.49229349247431 13 30.802112930149526 19.918730926876737 24.41392653400718 24.86522960896656 14 22.159137140739 20.769023398556257 25.90328421409075 31.168555246613995 15 25.21124781067462 27.532816251184556 22.820064781840045 24.435871156300777 16 24.17508356627235 26.217659421105793 25.01851320663533 24.588743805986528 17 23.91852874046909 26.24137111972641 25.69209804561358 24.14800209419092 18 23.840325339299202 25.504541386160422 26.567992576635636 24.08714069790474 19 24.93192646661171 25.253739832119532 26.84053327897861 22.973800422290147 20 24.298573435171722 25.05973128933286 26.72801572122604 23.91367955426938 21 23.908419420086645 25.573375173317313 27.05841789957911 23.459787507016937 22 24.549785937195644 25.022992539650318 26.22427568363252 24.202945839521526 23 23.873201177941297 25.387133547409835 26.57945802536207 24.1602072492868 24 23.76405339364954 25.360134264925016 26.57752656984184 24.298285771583604 25 24.29097089748574 25.081141679248525 26.359641949241347 24.26824547402439 26 23.809339861379026 25.373325695180153 26.65601763459985 24.161316808840972 27 24.218520768078218 25.75600045697416 26.297095666224763 23.728383108722863 28 23.90439212985299 25.776630045722072 26.172619522166123 24.146358302258815 29 23.83962672772806 26.01748665857373 26.58089634330266 23.56199027039555 30 24.28649156447075 25.714165952302086 26.182358989363845 23.816983493863315 31 24.083442166057505 25.161235441140335 26.669907676426135 24.08541471637603 32 23.508525937803846 25.737631082132882 26.516582983959058 24.237259996104214 33 23.61652306774313 25.134195063857206 26.610566787677147 24.638715080722513 34 24.012060501405852 25.18913880918781 26.998172925267465 23.80062776413887 35 23.76787520989168 25.228261057171906 26.800630229826766 24.203233503109644 36 23.568318869334156 24.8658871257394 27.243180112747687 24.322613892178758 37 23.25768328896465 24.530224813203596 27.62223853229106 24.589853365540694 38 23.376899298840552 24.38931074982391 27.818836047370798 24.414953903964744 39 22.840283422604934 24.44310384080204 28.444997489107827 24.271615247485204 40 23.262779043954176 24.194439216272883 28.453750681146282 24.089031058626663 41 22.615125022704877 24.38663958793424 28.564213498983726 24.43402189037716 42 22.22731341112305 24.741205507689248 28.520159875203316 24.511321205984387 43 22.07008471281722 24.37768092190427 28.28279632020738 25.26943804507113 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1492.0 1 1319.0 2 1146.0 3 1993.0 4 2840.0 5 2840.0 6 3571.5 7 4303.0 8 4018.0 9 3733.0 10 5222.0 11 6711.0 12 6711.0 13 10534.0 14 14357.0 15 18245.5 16 22134.0 17 20258.5 18 18383.0 19 18383.0 20 20710.5 21 23038.0 22 20039.0 23 17040.0 24 19867.0 25 22694.0 26 22694.0 27 27119.5 28 31545.0 29 35951.0 30 40357.0 31 46724.5 32 53092.0 33 53092.0 34 61263.5 35 69435.0 36 78869.5 37 88304.0 38 99024.5 39 109745.0 40 109745.0 41 122155.0 42 134565.0 43 147556.5 44 160548.0 45 173510.0 46 186472.0 47 186472.0 48 198910.0 49 211348.0 50 215853.5 51 220359.0 52 216724.0 53 213089.0 54 213089.0 55 201977.5 56 190866.0 57 177244.5 58 163623.0 59 148884.0 60 134145.0 61 134145.0 62 117016.5 63 99888.0 64 84474.5 65 69061.0 66 57260.0 67 45459.0 68 45459.0 69 37057.5 70 28656.0 71 23307.0 72 17958.0 73 14606.0 74 11254.0 75 11254.0 76 9155.0 77 7056.0 78 5579.0 79 4102.0 80 3170.5 81 2239.0 82 2239.0 83 1776.0 84 1313.0 85 1001.0 86 689.0 87 475.0 88 261.0 89 261.0 90 168.5 91 76.0 92 46.5 93 17.0 94 9.5 95 2.0 96 2.0 97 2.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2433398.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.58808637744988 #Duplication Level Percentage of deduplicated Percentage of total 1 83.71747899374022 54.071517645500386 2 8.765047691484003 11.322353148000731 3 2.840954913230866 5.504755239905875 4 1.3383776877576883 3.4577301481018083 5 0.7897059039566627 2.5502796568767536 6 0.5446635624131849 2.110726632947541 7 0.36329394310065893 1.6425122404172807 8 0.29176405708156883 1.507558569649567 9 0.2036705208116892 1.1839220271653028 >10 1.0934945332006747 12.16662734508115 >50 0.038645654677679095 1.6700657571293698 >100 0.01213815907129077 1.2452418905165106 >500 1.9109486843563948E-4 0.0785391353917452 >1k 3.8218973686806885E-4 0.46041459620891945 >5k 1.9109486843403443E-4 1.0277559671070517 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9178 0.3771680588214505 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 9163 0.3765516368469112 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6640 0.27286946072939977 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4482 0.18418688599234487 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 4.109479830262045E-5 0.0 0.0 0.0 6 0.0 4.109479830262045E-5 0.0 0.0 8.21895966052409E-5 7 0.0 4.109479830262045E-5 0.0 0.0 8.21895966052409E-5 8 0.0 4.109479830262045E-5 0.0 0.0 8.21895966052409E-5 9 0.0 4.109479830262045E-5 0.0 4.109479830262045E-5 1.2328439490786136E-4 10 4.109479830262045E-5 4.109479830262045E-5 0.0 4.109479830262045E-5 1.2328439490786136E-4 11 8.21895966052409E-5 4.109479830262045E-5 0.0 8.21895966052409E-5 1.2328439490786136E-4 12 8.21895966052409E-5 4.109479830262045E-5 0.0 1.2328439490786136E-4 1.2328439490786136E-4 13 8.21895966052409E-5 4.109479830262045E-5 0.0 1.2328439490786136E-4 1.2328439490786136E-4 14 1.2328439490786136E-4 4.109479830262045E-5 0.0 1.2328439490786136E-4 2.8766358811834316E-4 15 1.2328439490786136E-4 4.109479830262045E-5 0.0 1.2328439490786136E-4 3.287583864209636E-4 16 1.2328439490786136E-4 4.109479830262045E-5 0.0 2.465687898157227E-4 3.6985318472358404E-4 17 1.2328439490786136E-4 4.109479830262045E-5 0.0 5.342323779340658E-4 3.6985318472358404E-4 18 1.2328439490786136E-4 4.109479830262045E-5 0.0 5.342323779340658E-4 3.6985318472358404E-4 19 1.2328439490786136E-4 4.109479830262045E-5 0.0 7.397063694471681E-4 3.6985318472358404E-4 20 1.2328439490786136E-4 4.109479830262045E-5 0.0 0.0010273699575655112 3.6985318472358404E-4 21 1.2328439490786136E-4 4.109479830262045E-5 0.0 0.0018492659236179203 3.6985318472358404E-4 22 1.2328439490786136E-4 4.109479830262045E-5 0.0 0.002630067091367709 3.6985318472358404E-4 23 1.2328439490786136E-4 4.109479830262045E-5 0.0 0.003451963057420118 5.753271762366863E-4 24 1.2328439490786136E-4 4.109479830262045E-5 0.0 0.005342323779340658 5.753271762366863E-4 25 1.2328439490786136E-4 4.109479830262045E-5 0.0 0.006821736518234995 5.753271762366863E-4 26 1.2328439490786136E-4 4.109479830262045E-5 0.0 0.009862751592628909 5.753271762366863E-4 27 1.2328439490786136E-4 4.109479830262045E-5 0.0 0.0323416062641623 5.753271762366863E-4 28 1.2328439490786136E-4 4.109479830262045E-5 0.0 0.09357285573506677 5.753271762366863E-4 29 1.2328439490786136E-4 4.109479830262045E-5 0.0 0.19220037166135584 5.753271762366863E-4 30 1.2328439490786136E-4 4.109479830262045E-5 0.0 0.30907397803400843 5.753271762366863E-4 31 1.2328439490786136E-4 4.109479830262045E-5 0.0 0.651147079105021 5.753271762366863E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1880 0.0 16.138298 37 GGTATCA 4655 0.0 15.896886 1 GTACGAT 70 0.002593609 15.857143 6 GCGTTAA 75 0.004106159 14.8 1 TCTTATA 2915 0.0 14.025729 37 TCGTTAC 350 0.0 13.214285 23 CTCGTTA 420 0.0 13.214285 22 TACTTAC 695 0.0 13.043166 31 TATACGG 100 0.0018335031 12.950001 2 CTAGCGT 100 0.0018335031 12.950001 4 GTATAGG 335 0.0 12.701493 1 GGACCGT 205 2.0683729E-8 12.634146 6 GTCTTAT 235 8.094503E-10 12.595745 1 GTAATAC 210 2.8951035E-8 12.333333 3 GGCGTCA 470 0.0 12.202128 12 CTCTTAT 4435 0.0 12.138671 37 GTGCTAC 290 1.2732926E-11 12.120689 1 GGAGTGT 980 0.0 12.081633 6 TATACAC 745 0.0 11.919463 37 TACACCG 140 1.3995358E-4 11.892858 5 >>END_MODULE