##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727147.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5313198 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.941074659743528 31.0 31.0 33.0 28.0 34.0 2 31.184331357498817 31.0 31.0 34.0 28.0 34.0 3 31.26993215761957 31.0 31.0 34.0 28.0 34.0 4 35.10484438938658 37.0 35.0 37.0 32.0 37.0 5 34.298217194239704 35.0 35.0 37.0 30.0 37.0 6 34.314772383788444 35.0 35.0 37.0 30.0 37.0 7 34.29360340043793 35.0 35.0 37.0 30.0 37.0 8 34.2208265154056 35.0 35.0 37.0 30.0 37.0 9 35.884960244282254 37.0 35.0 39.0 31.0 39.0 10 35.53220734480439 37.0 35.0 39.0 30.0 39.0 11 35.702799331024366 37.0 35.0 39.0 30.0 39.0 12 35.53255139371806 37.0 35.0 39.0 30.0 39.0 13 35.69170431819029 37.0 35.0 39.0 30.0 39.0 14 36.57620909290412 38.0 36.0 40.0 31.0 41.0 15 36.49017710237789 38.0 36.0 40.0 31.0 41.0 16 36.422003659566236 38.0 35.0 40.0 30.0 41.0 17 36.33832543037169 38.0 35.0 40.0 30.0 41.0 18 36.31926835777624 38.0 35.0 40.0 30.0 41.0 19 36.36388818937295 38.0 35.0 40.0 30.0 41.0 20 36.24389887220465 38.0 35.0 40.0 30.0 41.0 21 36.152738331980096 38.0 34.0 40.0 29.0 41.0 22 36.064033186792585 38.0 34.0 40.0 29.0 41.0 23 35.974558072181765 38.0 34.0 40.0 29.0 41.0 24 35.844176708641385 38.0 34.0 40.0 29.0 41.0 25 35.7990989607389 38.0 34.0 40.0 29.0 41.0 26 35.53957315349437 38.0 34.0 40.0 27.0 41.0 27 35.35502046037057 38.0 34.0 40.0 27.0 41.0 28 35.22903513100773 38.0 34.0 40.0 27.0 41.0 29 35.09488334520942 38.0 33.0 40.0 27.0 40.0 30 35.01734529750256 38.0 33.0 40.0 26.0 40.0 31 34.96769102149026 38.0 33.0 40.0 26.0 40.0 32 34.83166108245919 37.0 33.0 40.0 25.0 40.0 33 34.73164598797184 37.0 33.0 40.0 25.0 40.0 34 34.68014837768139 37.0 33.0 40.0 25.0 40.0 35 34.57760956772174 37.0 33.0 39.0 25.0 40.0 36 34.423385501537865 37.0 33.0 39.0 25.0 40.0 37 34.32392374611298 37.0 33.0 39.0 24.0 40.0 38 34.265381037936095 37.0 33.0 39.0 24.0 40.0 39 34.142545035965156 37.0 32.0 39.0 24.0 40.0 40 34.04081120259399 37.0 32.0 39.0 24.0 40.0 41 33.9864211723335 37.0 32.0 39.0 24.0 40.0 42 33.821931349066986 37.0 32.0 39.0 24.0 40.0 43 32.50358089421851 35.0 30.0 38.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 5.0 10 5.0 11 8.0 12 7.0 13 17.0 14 37.0 15 65.0 16 191.0 17 386.0 18 850.0 19 1734.0 20 3473.0 21 6458.0 22 11408.0 23 18938.0 24 29690.0 25 44030.0 26 63490.0 27 88013.0 28 117948.0 29 154788.0 30 197754.0 31 247938.0 32 308998.0 33 386287.0 34 485916.0 35 617257.0 36 771629.0 37 874437.0 38 707221.0 39 174219.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 40.98983324167479 20.003150644865862 13.35180808243924 25.65520803102011 2 19.03955019180539 21.473282192758486 35.08045437041872 24.406713245017407 3 20.397677632190632 23.05908795418503 29.823375676946352 26.71985873667799 4 15.919489542832771 16.47700687984901 33.8721048980294 33.73139867928882 5 15.504202930137367 35.68854388637502 33.71067669603128 15.096576487456332 6 34.975564622285866 34.79757389052695 15.161772627332917 15.065088859854272 7 28.962274697837348 30.26448477922336 21.408142516051537 19.365098006887756 8 25.806962209953404 35.40184273200434 19.63435204183996 19.156843016202295 9 26.138363373621686 15.148259108732631 19.885688430960037 38.827689086685645 10 17.19021199661673 26.778128727745514 33.24476144122617 22.786897834411594 11 35.52536532611809 21.95180755544966 21.613517885085404 20.909309233346846 12 21.22525830959057 25.056566685450083 30.39066114231015 23.327513862649198 13 30.56592282086984 20.11856136360813 24.41802470000177 24.897491115520257 14 22.083611414443805 20.91672472962611 25.63761034314927 31.362053512780815 15 24.812570508383086 27.824955892853982 22.627878727651407 24.734594871111522 16 24.400935180657676 26.45122579659181 24.652685633021772 24.495153389728745 17 23.817538890890194 26.62931063363345 25.657617126258046 23.895533349218308 18 24.01356019482052 25.68867186955954 26.22781985538653 24.06994808023341 19 24.719857983835723 25.593700818226612 26.538028509383615 23.14841268855405 20 24.37646780714741 25.474619993457804 26.41636919986795 23.73254299952684 21 24.146963843621112 25.57839929925442 26.473001759015947 23.80163509810852 22 24.560970624471366 25.416594676125374 26.038141247512325 23.984293451890935 23 24.156092056046095 25.52826000461492 25.958942241565246 24.35670569777373 24 24.1198803432509 25.667931065245455 25.96803281187714 24.24415577962651 25 24.50563671822507 25.352621904924305 25.93692160540601 24.20481977144462 26 24.129667292655007 25.617038928344098 26.134072172729116 24.11922160627178 27 24.34322982128654 25.798624481903364 25.83886390079948 24.019281796010613 28 24.227047439225867 25.62985606785217 26.031120993420537 24.11197549950143 29 24.108851204114735 25.9175923803329 26.14263575345771 23.830920662094655 30 24.207153582456368 25.782137236368758 25.996621996771058 24.014087184403817 31 24.283868208939325 25.269244624423937 26.23276979325822 24.214117373378517 32 23.82981021975842 25.6666512334003 26.202693744897143 24.30084480194414 33 23.988829326518605 25.29469069287461 26.19473243797803 24.521747542628752 34 24.24306415834682 25.12861368990954 26.51344820953407 24.11487394220957 35 24.020204027781386 25.16234102324062 26.512281304028196 24.3051736449498 36 23.880645893490136 24.844415736059524 26.73920678280764 24.535731587642697 37 23.74110658025543 24.49234905230334 27.104015321845715 24.662529045595516 38 23.49249924433458 24.42323813266511 27.571153945326337 24.513108677673973 39 23.29892467775528 24.339484431033814 27.948497308024283 24.413093583186622 40 23.31721874471834 24.280047534460415 28.066862932644334 24.335870788176912 41 22.91890872502775 24.337639967492272 28.167028595584053 24.576422711895923 42 22.591704656969306 24.595883684364857 28.066900574757426 24.74551108390841 43 22.610337502950202 24.343248642343084 28.006823762261448 25.039590092445263 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4486.0 1 3509.5 2 2533.0 3 3672.5 4 4812.0 5 4812.0 6 5794.0 7 6776.0 8 6334.5 9 5893.0 10 8160.0 11 10427.0 12 10427.0 13 16611.0 14 22795.0 15 27666.0 16 32537.0 17 30993.0 18 29449.0 19 29449.0 20 34868.0 21 40287.0 22 38493.5 23 36700.0 24 43932.5 25 51165.0 26 51165.0 27 61756.0 28 72347.0 29 83622.0 30 94897.0 31 110051.0 32 125205.0 33 125205.0 34 144651.5 35 164098.0 36 186937.0 37 209776.0 38 234828.5 39 259881.0 40 259881.0 41 285655.0 42 311429.0 43 337793.5 44 364158.0 45 387739.5 46 411321.0 47 411321.0 48 431659.5 49 451998.0 50 458695.5 51 465393.0 52 458142.5 53 450892.0 54 450892.0 55 430471.0 56 410050.0 57 382680.5 58 355311.0 59 322355.0 60 289399.0 61 289399.0 62 253101.0 63 216803.0 64 184742.5 65 152682.0 66 126496.5 67 100311.0 68 100311.0 69 81642.5 70 62974.0 71 51106.0 72 39238.0 73 31730.5 74 24223.0 75 24223.0 76 19462.0 77 14701.0 78 11768.5 79 8836.0 80 6744.0 81 4652.0 82 4652.0 83 3589.5 84 2527.0 85 1927.0 86 1327.0 87 976.0 88 625.0 89 625.0 90 414.0 91 203.0 92 134.0 93 65.0 94 38.5 95 12.0 96 12.0 97 6.0 98 0.0 99 2.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5313198.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.74170193880121 #Duplication Level Percentage of deduplicated Percentage of total 1 82.91734206440525 50.365404772337264 2 8.852664562422074 10.754518244296593 3 2.9449348262366137 5.366410603333791 4 1.4495455294440884 3.5219144998485836 5 0.8854698831943946 2.689247386038951 6 0.5584789979933099 2.0353778901113992 7 0.40633261735413645 1.727693431193654 8 0.3025708830508555 1.4702936314907953 9 0.22400876942996759 1.2246006513953462 >10 1.3671372506037291 15.102077758496893 >50 0.07339679246955134 3.010226915017388 >100 0.017683890869005063 1.6043099689639868 >500 9.298600144747388E-5 0.04083589803947128 >1k 2.1696597080997034E-4 0.2845697234499339 >5k 6.199027737427594E-5 0.3070679582843769 >10k+ 6.199027737427594E-5 0.4954506677015121 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13791 0.25956119083083296 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12525 0.23573373324314284 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9105 0.17136571985459603 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7205 0.13560571241651448 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 1.882105654635871E-5 0.0 0.0 0.0 1.882105654635871E-5 3 1.882105654635871E-5 0.0 0.0 0.0 1.882105654635871E-5 4 1.882105654635871E-5 0.0 0.0 0.0 1.882105654635871E-5 5 1.882105654635871E-5 0.0 0.0 0.0 1.882105654635871E-5 6 3.764211309271742E-5 0.0 0.0 0.0 5.646316963907613E-5 7 3.764211309271742E-5 0.0 0.0 0.0 5.646316963907613E-5 8 5.646316963907613E-5 0.0 0.0 0.0 7.528422618543484E-5 9 5.646316963907613E-5 0.0 0.0 0.0 1.1292633927815225E-4 10 5.646316963907613E-5 0.0 0.0 0.0 1.1292633927815225E-4 11 5.646316963907613E-5 0.0 0.0 0.0 1.1292633927815225E-4 12 5.646316963907613E-5 0.0 0.0 1.882105654635871E-5 1.1292633927815225E-4 13 5.646316963907613E-5 0.0 0.0 1.882105654635871E-5 1.1292633927815225E-4 14 5.646316963907613E-5 0.0 0.0 1.882105654635871E-5 1.882105654635871E-4 15 5.646316963907613E-5 0.0 0.0 3.764211309271742E-5 2.070316220099458E-4 16 5.646316963907613E-5 0.0 0.0 7.528422618543484E-5 3.0113690474173934E-4 17 5.646316963907613E-5 0.0 0.0 1.3174739582451096E-4 3.0113690474173934E-4 18 5.646316963907613E-5 0.0 0.0 1.3174739582451096E-4 3.387790178344568E-4 19 5.646316963907613E-5 0.0 0.0 1.693895089172284E-4 3.576000743808155E-4 20 5.646316963907613E-5 0.0 0.0 3.0113690474173934E-4 3.576000743808155E-4 21 5.646316963907613E-5 0.0 0.0 5.646316963907613E-4 3.9524218747353287E-4 22 5.646316963907613E-5 0.0 0.0 9.410528273179355E-4 3.9524218747353287E-4 23 5.646316963907613E-5 0.0 0.0 0.0014680424106159793 4.7052641365896773E-4 24 7.528422618543484E-5 0.0 0.0 0.00233381101174848 4.893474702053264E-4 25 7.528422618543484E-5 0.0 0.0 0.0038206744789108177 5.081685267516852E-4 26 7.528422618543484E-5 0.0 0.0 0.006869685639420929 5.081685267516852E-4 27 7.528422618543484E-5 0.0 0.0 0.028099837423713553 5.081685267516852E-4 28 7.528422618543484E-5 0.0 0.0 0.08456300706278969 5.081685267516852E-4 29 7.528422618543484E-5 0.0 0.0 0.15994133853095632 5.269895832980438E-4 30 7.528422618543484E-5 0.0 0.0 0.2548182845811506 5.269895832980438E-4 31 7.528422618543484E-5 0.0 0.0 0.5369459222110676 5.458106398444026E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4815 0.0 21.093456 1 CTTATAC 3480 0.0 15.895114 37 TCTTATA 5765 0.0 14.633131 37 GTATCAA 7070 0.0 14.260962 2 CTCTTAT 8575 0.0 12.189504 37 GTATTAG 565 0.0 12.115045 1 CTATACT 750 0.0 11.593334 4 TATACTG 800 0.0 11.33125 5 CTAGTAC 400 0.0 11.1 3 TAAGACT 810 0.0 10.734568 4 TCTATAC 605 0.0 10.702479 3 AACGCAG 9690 0.0 10.557792 7 TATCAAC 9780 0.0 10.555215 3 TCAACGC 9815 0.0 10.461029 5 TCTCTTA 12035 0.0 10.452846 37 CAACGCA 9935 0.0 10.371917 6 ATCAACG 9930 0.0 10.35851 4 TAGACAG 1070 0.0 10.200934 5 GTCTTAG 665 0.0 10.015038 1 GTATAGG 760 0.0 9.980262 1 >>END_MODULE