##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727146.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5811233 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.459632577114014 31.0 31.0 34.0 30.0 34.0 2 31.69637459038383 31.0 31.0 34.0 30.0 34.0 3 31.80009285464892 31.0 31.0 34.0 30.0 34.0 4 35.525586738649096 37.0 35.0 37.0 33.0 37.0 5 35.055434190988386 37.0 35.0 37.0 32.0 37.0 6 35.06672129649594 37.0 35.0 37.0 32.0 37.0 7 35.02590362492779 37.0 35.0 37.0 32.0 37.0 8 34.97831905896735 36.0 35.0 37.0 32.0 37.0 9 36.729592842001 38.0 37.0 39.0 32.0 39.0 10 36.46968104703425 38.0 35.0 39.0 32.0 39.0 11 36.59030605036831 38.0 35.0 39.0 32.0 39.0 12 36.458948729125126 38.0 35.0 39.0 32.0 39.0 13 36.56631183089716 38.0 35.0 39.0 32.0 39.0 14 37.616281432873194 39.0 37.0 40.0 32.0 41.0 15 37.550301803421064 39.0 37.0 40.0 32.0 41.0 16 37.49551652807588 39.0 36.0 40.0 32.0 41.0 17 37.42682026344495 39.0 36.0 40.0 32.0 41.0 18 37.41188057680702 39.0 36.0 40.0 32.0 41.0 19 37.45373554975338 39.0 36.0 40.0 32.0 41.0 20 37.347087098383426 39.0 36.0 40.0 32.0 41.0 21 37.28887002121581 39.0 36.0 40.0 32.0 41.0 22 37.2137702962521 39.0 36.0 40.0 31.0 41.0 23 37.14823342997949 39.0 36.0 40.0 31.0 41.0 24 37.0300208234638 39.0 36.0 40.0 31.0 41.0 25 36.992316260593924 39.0 36.0 40.0 31.0 41.0 26 36.7895326172604 39.0 36.0 40.0 31.0 41.0 27 36.62192653435166 39.0 36.0 40.0 30.0 41.0 28 36.52304338855455 39.0 35.0 40.0 30.0 41.0 29 36.39789559289741 38.0 35.0 40.0 30.0 41.0 30 36.35398184860252 38.0 35.0 40.0 30.0 41.0 31 36.31218555511369 38.0 35.0 40.0 30.0 41.0 32 36.19400340685015 38.0 35.0 40.0 30.0 41.0 33 36.11838812864671 38.0 35.0 40.0 29.0 41.0 34 36.08163844058567 38.0 35.0 40.0 29.0 41.0 35 35.9937023691874 38.0 35.0 40.0 29.0 41.0 36 35.8706852745364 38.0 35.0 40.0 29.0 41.0 37 35.78676762745531 38.0 34.0 40.0 28.0 41.0 38 35.74624645062416 38.0 34.0 40.0 28.0 41.0 39 35.64638537122845 38.0 34.0 40.0 27.0 41.0 40 35.56201721734441 38.0 34.0 40.0 27.0 41.0 41 35.50873540950776 38.0 34.0 40.0 27.0 41.0 42 35.38786002901622 38.0 34.0 40.0 27.0 41.0 43 34.04065264634889 37.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 6.0 11 7.0 12 9.0 13 13.0 14 16.0 15 33.0 16 97.0 17 168.0 18 379.0 19 814.0 20 1764.0 21 3561.0 22 6515.0 23 11392.0 24 18428.0 25 28817.0 26 42385.0 27 60853.0 28 84306.0 29 113884.0 30 148147.0 31 189808.0 32 238863.0 33 301397.0 34 387104.0 35 508621.0 36 695287.0 37 998346.0 38 1368276.0 39 601934.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.65546279077091 19.28807535337165 12.947802987765247 26.108658868092192 2 18.66440392254105 20.976994038958686 35.51038135968735 24.84822067881291 3 20.094393048772954 22.689401715608373 29.812399537241063 27.40380569837761 4 15.424970914090006 15.936549093798167 34.10734004298227 34.53113994912956 5 15.499481779512198 35.57637423933957 33.81103459455162 15.113109386596612 6 35.22904691654938 34.50212717335546 15.193557029979695 15.075268880115459 7 29.2364804508785 30.1480598007342 21.363658968759296 19.251800779628006 8 26.09305116487327 35.14047707259372 19.662694646729875 19.103777115803137 9 26.51633482945874 14.935539497383774 19.597218008639476 38.95090766451801 10 17.075360771113463 26.530290559679848 33.291213757906455 23.103134911300234 11 35.80436372108983 21.720192599401884 21.55478880299585 20.920654876512437 12 21.41667697715786 24.757190083412592 30.389505979195807 23.43662696023374 13 30.661857819158172 19.955231531759267 24.31757597742166 25.065334671660906 14 22.215939371214336 20.547102482381966 25.595463131490337 31.641495014913357 15 24.95306934001786 27.59333518377253 22.546420011037245 24.907175465172365 16 24.535928950018008 26.252156814225142 24.50891230828294 24.70300192747391 17 24.061055545355003 26.291546045391744 25.458710741765127 24.18868766748812 18 24.2060161759131 25.456938312402894 26.098798654261497 24.238246857422514 19 24.953275836642586 25.317449842400052 26.326289102502 23.40298521845536 20 24.542898211102532 25.175156459911346 26.21161464357048 24.07033068541564 21 24.303207253951097 25.341868068273982 26.411675456826462 23.943249220948463 22 24.725871428662387 25.07223510053718 25.8672471057347 24.334646365065726 23 24.253303902975496 25.258150894999392 25.928094777820814 24.560450424204294 24 24.239313756650265 25.396469217462116 25.924808039877252 24.43940898601037 25 24.63633793379133 25.079651770975282 25.861396368034118 24.422613927199272 26 24.27527858545682 25.372412360681462 25.965074881698946 24.387234172162774 27 24.505814858912043 25.63369942316889 25.67482666759361 24.185659050325466 28 24.324080621100546 25.475092807326778 25.783788053241025 24.41703851833165 29 24.29332983206834 25.694116893953485 25.984984597933003 24.02756867604517 30 24.396543728327533 25.555488826553674 25.83656514891074 24.21140229620805 31 24.41593720299978 25.033585815609182 26.076015193333323 24.474461788057717 32 23.917471558961758 25.503021475821054 26.048964135494135 24.530542829723057 33 24.078814255081497 25.020456071886983 26.140011938946518 24.760717734085002 34 24.353041772718456 24.929494308694903 26.46553665977599 24.251927258810653 35 24.165714917987284 24.90913718310727 26.431774461633182 24.49337343727226 36 24.003529027316578 24.60395237981337 26.66490915094955 24.7276094419205 37 23.876275482328793 24.249827876459264 26.96181688120232 24.91207976000962 38 23.65651144946348 24.17868978924094 27.40798725502832 24.75681150626726 39 23.44411246288008 24.114744667783928 27.805854626720354 24.635288242615637 40 23.508487785638607 24.031165158925823 27.957337109009394 24.50300994642617 41 23.029398408220768 24.10412729966257 28.13110401871685 24.73537027339981 42 22.719137229569007 24.355691812735785 28.024207599316703 24.900963358378505 43 22.603516327774155 24.078263597415557 27.99910105136036 25.319119023449925 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3610.0 1 3023.0 2 2436.0 3 3875.0 4 5314.0 5 5314.0 6 6432.0 7 7550.0 8 6790.5 9 6031.0 10 8245.5 11 10460.0 12 10460.0 13 16594.5 14 22729.0 15 27174.5 16 31620.0 17 30442.5 18 29265.0 19 29265.0 20 34702.0 21 40139.0 22 38809.0 23 37479.0 24 45244.5 25 53010.0 26 53010.0 27 63607.5 28 74205.0 29 86199.0 30 98193.0 31 114359.0 32 130525.0 33 130525.0 34 150373.5 35 170222.0 36 194646.5 37 219071.0 38 247344.5 39 275618.0 40 275618.0 41 305146.5 42 334675.0 43 365163.0 44 395651.0 45 423395.0 46 451139.0 47 451139.0 48 475090.5 49 499042.0 50 509859.5 51 520677.0 52 513219.0 53 505761.0 54 505761.0 55 482745.5 56 459730.0 57 428520.0 58 397310.0 59 360717.5 60 324125.0 61 324125.0 62 283404.0 63 242683.0 64 206353.5 65 170024.0 66 141220.0 67 112416.0 68 112416.0 69 91362.0 70 70308.0 71 57436.5 72 44565.0 73 35972.5 74 27380.0 75 27380.0 76 22005.0 77 16630.0 78 13371.5 79 10113.0 80 7823.0 81 5533.0 82 5533.0 83 4311.5 84 3090.0 85 2404.5 86 1719.0 87 1258.0 88 797.0 89 797.0 90 528.5 91 260.0 92 174.0 93 88.0 94 58.0 95 28.0 96 28.0 97 18.5 98 9.0 99 6.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5811233.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.33800115917644 #Duplication Level Percentage of deduplicated Percentage of total 1 81.72097425678615 47.67438290921419 2 9.34457341867421 10.902874698612507 3 3.2217404754650234 5.638496987767326 4 1.5783679852031134 3.683153334015449 5 0.949044237388521 2.7682671910440626 6 0.6010179187734509 2.103731042525484 7 0.4288984848418538 1.7514756214111162 8 0.3133430353815068 1.4623845089044967 9 0.23414959684453363 1.2293837506923389 >10 1.4945584947909099 15.930022894231014 >50 0.0884121064652692 3.474500673522512 >100 0.02429990488633931 2.273759454787652 >500 2.952818362784248E-4 0.10754255074764285 >1k 2.0669260367454218E-4 0.2593682973070976 >5k 5.9055029573847016E-5 0.2944227227139321 >10k+ 5.9055029573847016E-5 0.4462333625031834 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13457 0.2315687565788534 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12448 0.21420583204975605 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9588 0.16499080315657624 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7504 0.12912922266238505 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 1.720805206055238E-5 3 0.0 0.0 0.0 0.0 1.720805206055238E-5 4 0.0 0.0 0.0 0.0 1.720805206055238E-5 5 0.0 0.0 0.0 0.0 1.720805206055238E-5 6 0.0 0.0 0.0 0.0 1.0324831236331429E-4 7 0.0 0.0 0.0 0.0 1.0324831236331429E-4 8 0.0 0.0 0.0 0.0 1.2045636442386668E-4 9 0.0 0.0 0.0 0.0 1.5487246854497145E-4 10 0.0 0.0 0.0 0.0 1.5487246854497145E-4 11 0.0 0.0 0.0 0.0 1.5487246854497145E-4 12 0.0 0.0 0.0 0.0 1.5487246854497145E-4 13 0.0 0.0 0.0 0.0 1.5487246854497145E-4 14 0.0 0.0 0.0 0.0 2.4091272884773336E-4 15 0.0 1.720805206055238E-5 0.0 3.441610412110476E-5 2.581207809082857E-4 16 1.720805206055238E-5 1.720805206055238E-5 0.0 1.2045636442386668E-4 2.753288329688381E-4 17 1.720805206055238E-5 1.720805206055238E-5 0.0 2.753288329688381E-4 2.753288329688381E-4 18 1.720805206055238E-5 1.720805206055238E-5 0.0 3.2695298915049527E-4 3.2695298915049527E-4 19 1.720805206055238E-5 1.720805206055238E-5 0.0 3.613690932716E-4 3.2695298915049527E-4 20 1.720805206055238E-5 3.441610412110476E-5 0.0 4.646174056349143E-4 3.2695298915049527E-4 21 1.720805206055238E-5 3.441610412110476E-5 0.0 6.022818221193334E-4 3.4416104121104765E-4 22 1.720805206055238E-5 3.441610412110476E-5 0.0 8.948187071487238E-4 3.4416104121104765E-4 23 1.720805206055238E-5 3.441610412110476E-5 0.0 0.0013766441648441906 4.3020130151380954E-4 24 1.720805206055238E-5 3.441610412110476E-5 0.0 0.0023919192364167813 4.3020130151380954E-4 25 1.720805206055238E-5 3.441610412110476E-5 0.0 0.003648107036837105 4.474093535743619E-4 26 1.720805206055238E-5 3.441610412110476E-5 0.0 0.006676724199494324 4.818254576954667E-4 27 1.720805206055238E-5 3.441610412110476E-5 0.0 0.029029983826151868 4.818254576954667E-4 28 1.720805206055238E-5 3.441610412110476E-5 0.0 0.08831172317475483 4.818254576954667E-4 29 1.720805206055238E-5 3.441610412110476E-5 0.0 0.1654726286142717 4.818254576954667E-4 30 1.720805206055238E-5 3.441610412110476E-5 0.0 0.26364456561972305 4.818254576954667E-4 31 1.720805206055238E-5 3.441610412110476E-5 0.0 0.5654565907097513 4.818254576954667E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4485 0.0 22.397995 1 CTTATAC 3995 0.0 15.883606 37 GTATCAA 6655 0.0 14.927874 2 TCTTATA 6300 0.0 13.361111 37 CTCTTAT 9510 0.0 12.605679 37 TCGTTAC 490 0.0 12.081634 23 TAGACAG 1270 0.0 11.653543 5 TATACAG 1060 0.0 11.344339 5 GTACCGT 370 0.0 11.000001 6 TATCAAC 9370 0.0 10.957844 3 TCAACGC 9280 0.0 10.864763 5 ATCAACG 9275 0.0 10.830728 4 CAACGCA 9395 0.0 10.810537 6 CGCGAAA 120 0.007168264 10.791667 14 AACGCAG 9400 0.0 10.785107 7 CTATACT 745 0.0 10.677852 4 TATACTG 890 0.0 10.601123 5 TCTCTTA 13215 0.0 10.4994335 37 GTACTAC 640 0.0 10.40625 1 TTATACT 1125 0.0 10.360001 4 >>END_MODULE