##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727144.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3980307 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.44091900448885 31.0 31.0 34.0 30.0 34.0 2 31.69190592584944 31.0 31.0 34.0 30.0 34.0 3 31.80194643277516 31.0 31.0 34.0 30.0 34.0 4 35.55424016288191 37.0 35.0 37.0 33.0 37.0 5 35.12471701303442 37.0 35.0 37.0 32.0 37.0 6 35.138296116354844 37.0 35.0 37.0 32.0 37.0 7 35.08649860425339 36.0 35.0 37.0 32.0 37.0 8 35.034128774489005 36.0 35.0 37.0 32.0 37.0 9 36.848087346026325 39.0 37.0 39.0 33.0 39.0 10 36.590600926008975 38.0 35.0 39.0 32.0 39.0 11 36.70607970691708 39.0 35.0 39.0 32.0 39.0 12 36.579522132338035 38.0 35.0 39.0 32.0 39.0 13 36.72968391634112 39.0 35.0 39.0 32.0 39.0 14 37.73994870244933 39.0 37.0 40.0 33.0 41.0 15 37.73885732934671 39.0 37.0 40.0 33.0 41.0 16 37.667473890833044 39.0 37.0 40.0 32.0 41.0 17 37.603515256486496 39.0 37.0 40.0 32.0 41.0 18 37.602022155577444 39.0 37.0 40.0 32.0 41.0 19 37.63655843632162 39.0 37.0 40.0 32.0 41.0 20 37.512438362166534 39.0 37.0 40.0 32.0 41.0 21 37.522920719431944 39.0 37.0 40.0 32.0 41.0 22 37.43167373772928 39.0 36.0 40.0 32.0 41.0 23 37.36387343991305 39.0 36.0 40.0 32.0 41.0 24 37.24521173869252 39.0 36.0 40.0 31.0 41.0 25 37.2174279521655 39.0 36.0 40.0 31.0 41.0 26 37.07641521118848 39.0 36.0 40.0 31.0 41.0 27 36.87059616255731 39.0 36.0 40.0 31.0 41.0 28 36.756455971863474 39.0 36.0 40.0 30.0 41.0 29 36.645463779552685 39.0 35.0 40.0 30.0 41.0 30 36.62981473539604 39.0 35.0 40.0 30.0 41.0 31 36.568228531115814 38.0 35.0 40.0 30.0 41.0 32 36.450894868159665 38.0 35.0 40.0 30.0 41.0 33 36.435310643123756 38.0 35.0 40.0 30.0 41.0 34 36.434399658116824 38.0 35.0 40.0 30.0 41.0 35 36.32126592245272 38.0 35.0 40.0 30.0 41.0 36 36.257939651388696 38.0 35.0 40.0 30.0 41.0 37 36.12051231224124 38.0 35.0 40.0 30.0 41.0 38 36.08034807365362 38.0 35.0 40.0 29.0 41.0 39 35.97938299734166 38.0 35.0 40.0 29.0 41.0 40 35.923000663014186 38.0 35.0 40.0 29.0 41.0 41 35.860037429273675 38.0 35.0 40.0 29.0 41.0 42 35.82562877687575 38.0 35.0 40.0 28.0 41.0 43 34.51855899557496 37.0 33.0 40.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 0.0 10 5.0 11 7.0 12 2.0 13 2.0 14 6.0 15 9.0 16 18.0 17 50.0 18 98.0 19 282.0 20 622.0 21 1318.0 22 2639.0 23 4780.0 24 8593.0 25 14404.0 26 22145.0 27 33941.0 28 48837.0 29 68887.0 30 92999.0 31 122041.0 32 158889.0 33 206037.0 34 268516.0 35 353506.0 36 473471.0 37 654347.0 38 927334.0 39 516520.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.05715790264419 18.866182935135406 13.02376927206871 26.052889890151686 2 18.325043771749264 20.977401994368776 35.71689319441943 24.980661039462536 3 19.956098863730862 22.693023427589882 30.239275513170217 27.11160219550904 4 15.192471334497565 15.856565837760755 34.08282325961289 34.86813956812879 5 15.36941748463121 35.65689782220316 33.917534501735666 15.056150191429957 6 35.05425586518829 34.207763371016355 15.353614683490493 15.384366080304861 7 28.784588726447485 30.46609218836637 21.529369468234485 19.219949616951656 8 26.06728576464077 35.15407228638394 19.817943691278085 18.96069825769721 9 26.457532044638764 14.958318541760724 19.917182267598957 38.666967146001554 10 17.12076480532783 26.678419528945884 33.32489177342351 22.87592389230278 11 35.314235811458765 21.96036637374956 21.64498869057085 21.080409124220818 12 21.098849912833355 24.884311687515563 30.67389023007522 23.342948169575862 13 30.615000300228097 20.005140307016518 24.522781785425092 24.85707760733029 14 22.006418097900486 20.876153522831277 26.06680841452682 31.05061996474141 15 24.98244482146729 27.667112109694052 22.995487534001775 24.354955534836886 16 24.011188081723343 26.388994617751848 25.15667761305849 24.44313968746632 17 23.654758288745064 26.35746438654104 25.960283968045683 24.027493356668217 18 23.645336904917134 25.696409849792996 26.736028150592407 23.92222509469747 19 24.643903095916972 25.437258985299376 27.03293992146837 22.885897997315283 20 24.197831976277207 25.187001907139322 26.89272460641855 23.72244151016492 21 23.78502462247259 25.550968807179945 27.278046643135816 23.385959927211644 22 24.382465975614444 25.0583434895851 26.50602076673985 24.053169768060602 23 23.79638053044652 25.456880587351677 26.70077961323084 24.04595926897096 24 23.72324546825157 25.3273930880206 26.80207833214875 24.147283111579082 25 24.153111807707294 25.09932022831405 26.57106600068789 24.17650196329077 26 23.681916997859712 25.499842097607043 26.87209805675793 23.94614284777531 27 24.010936844821266 25.802783554132887 26.45999416627913 23.726285434766716 28 23.729626885564358 25.928954726356533 26.293775831864224 24.047642556214885 29 23.733621552307397 26.029148002905306 26.78268284330832 23.454547601478982 30 24.200369468988196 25.66563332928842 26.434945847141943 23.699051354581442 31 23.903708935014308 25.304430035170654 26.871771448785232 23.920089581029806 32 23.51064880171303 25.7208552003652 26.6816856086729 24.086810389248868 33 23.511176399207397 25.185720598938726 26.737887303667783 24.565215698186094 34 23.829694543662082 25.165948254745174 27.186747152920614 23.817610048672126 35 23.652522280316568 25.09148163696921 27.061229196642365 24.194766886071854 36 23.448970142252847 24.845545833524902 27.434491862059886 24.270992162162365 37 23.156605759304497 24.562527463333858 27.85483632292685 24.426030454434798 38 23.180322522860674 24.35256878426714 28.06291072522798 24.404197967644205 39 22.68108967474117 24.41977465557305 28.734818696145798 24.164316973539982 40 23.100278445858574 24.163688881284788 28.666004908666594 24.07002776419005 41 22.430380370157376 24.415654370378967 28.774639745125185 24.37932551433847 42 22.102340347113927 24.690733654464342 28.75064662097672 24.456279377445007 43 21.895723118844852 24.470449138722213 28.565711137356992 25.06811660507594 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3458.0 1 2988.0 2 2518.0 3 3977.0 4 5436.0 5 5436.0 6 6311.5 7 7187.0 8 6627.0 9 6067.0 10 8495.5 11 10924.0 12 10924.0 13 16866.0 14 22808.0 15 27820.5 16 32833.0 17 30754.0 18 28675.0 19 28675.0 20 32879.0 21 37083.0 22 33090.0 23 29097.0 24 33998.0 25 38899.0 26 38899.0 27 46138.0 28 53377.0 29 61390.0 30 69403.0 31 80006.5 32 90610.0 33 90610.0 34 104301.0 35 117992.0 36 134198.5 37 150405.0 38 168057.0 39 185709.0 40 185709.0 41 204839.5 42 223970.0 43 245138.5 44 266307.0 45 286980.5 46 307654.0 47 307654.0 48 326091.0 49 344528.0 50 351687.0 51 358846.0 52 352949.5 53 347053.0 54 347053.0 55 328829.5 56 310606.0 57 287409.5 58 264213.0 59 239552.5 60 214892.0 61 214892.0 62 187561.5 63 160231.0 64 135420.0 65 110609.0 66 90706.5 67 70804.0 68 70804.0 69 57500.5 70 44197.0 71 35536.0 72 26875.0 73 21726.0 74 16577.0 75 16577.0 76 13168.5 77 9760.0 78 7681.0 79 5602.0 80 4202.5 81 2803.0 82 2803.0 83 2089.5 84 1376.0 85 985.5 86 595.0 87 412.0 88 229.0 89 229.0 90 150.5 91 72.0 92 44.5 93 17.0 94 12.0 95 7.0 96 7.0 97 5.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3980307.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.728838072043956 #Duplication Level Percentage of deduplicated Percentage of total 1 81.64143334603189 49.57989385640741 2 9.555674273370427 11.60609991233418 3 3.3158774326044784 6.041081510141468 4 1.6214582707561584 3.938771070613086 5 0.9249621192548164 2.808593738150018 6 0.6257577707748124 2.280092540022407 7 0.41153694143849107 1.7494512194097656 8 0.31457302804149617 1.5282923585411652 9 0.22958262017774206 1.2548057188436703 >10 1.2892462229117323 13.847102597309682 >50 0.053390127597801706 2.1843779151291094 >100 0.015680240175038416 1.4982434633171389 >500 3.724230941749666E-4 0.15668431485999634 >1k 2.896623997021479E-4 0.3654878312929599 >5k 4.138034281458796E-5 0.18347267988653448 >10k+ 1.2414102844376387E-4 0.9775492737414314 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15051 0.378136661317833 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13601 0.34170731051650033 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10248 0.25746757724969455 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7301 0.1834280622072619 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.0247380415631256E-5 2 0.0 0.0 0.0 0.0 5.0247380415631256E-5 3 0.0 0.0 0.0 0.0 5.0247380415631256E-5 4 0.0 0.0 0.0 2.5123690207815628E-5 5.0247380415631256E-5 5 0.0 0.0 0.0 2.5123690207815628E-5 5.0247380415631256E-5 6 0.0 0.0 0.0 2.5123690207815628E-5 1.758658314547094E-4 7 0.0 0.0 0.0 2.5123690207815628E-5 1.758658314547094E-4 8 0.0 0.0 0.0 2.5123690207815628E-5 2.0098952166252502E-4 9 0.0 0.0 0.0 2.5123690207815628E-5 2.2611321187034064E-4 10 0.0 0.0 0.0 2.5123690207815628E-5 2.5123690207815626E-4 11 5.0247380415631256E-5 0.0 0.0 2.5123690207815628E-5 2.5123690207815626E-4 12 5.0247380415631256E-5 0.0 0.0 2.5123690207815628E-5 2.5123690207815626E-4 13 5.0247380415631256E-5 0.0 0.0 2.5123690207815628E-5 2.5123690207815626E-4 14 7.537107062344689E-5 0.0 0.0 2.5123690207815628E-5 2.763605922859719E-4 15 7.537107062344689E-5 0.0 0.0 7.537107062344689E-5 3.7685535311723445E-4 16 7.537107062344689E-5 0.0 0.0 7.537107062344689E-5 4.271027335328657E-4 17 7.537107062344689E-5 0.0 0.0 1.5074214124689378E-4 4.271027335328657E-4 18 7.537107062344689E-5 0.0 0.0 2.0098952166252502E-4 4.522264237406813E-4 19 1.0049476083126251E-4 0.0 0.0 3.0148428249378756E-4 4.522264237406813E-4 20 1.0049476083126251E-4 0.0 0.0 5.275974943641282E-4 4.522264237406813E-4 21 1.2561845103907813E-4 0.0 0.0 8.290817768579157E-4 4.7735011394849693E-4 22 1.2561845103907813E-4 0.0 0.0 0.0011808134397673345 5.024738041563125E-4 23 1.2561845103907813E-4 0.0 0.0 0.001482297722261122 6.029685649875751E-4 24 1.2561845103907813E-4 0.0 0.0 0.0024621216403659316 6.280922551953907E-4 25 1.2561845103907813E-4 0.0 0.0 0.003969543052834869 6.280922551953907E-4 26 1.2561845103907813E-4 0.0 0.0 0.006934138497357113 6.280922551953907E-4 27 1.2561845103907813E-4 0.0 0.0 0.028414893625039475 6.280922551953907E-4 28 1.2561845103907813E-4 0.0 0.0 0.0906462742697988 6.280922551953907E-4 29 1.2561845103907813E-4 0.0 0.0 0.17493625491702022 6.280922551953907E-4 30 1.2561845103907813E-4 0.0 0.0 0.2827922569791727 6.280922551953907E-4 31 1.2561845103907813E-4 0.0 0.0 0.6070888501816568 6.78339635611022E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5180 0.0 19.5 1 CTTATAC 2820 0.0 16.531914 37 TCTTATA 4780 0.0 14.861925 37 GTATCAA 7235 0.0 14.06358 2 TAGTACT 385 0.0 13.454545 4 CGTATAC 175 5.3143594E-7 12.685714 3 CTGTGCG 685 0.0 12.423358 9 TATACTG 650 0.0 12.2384615 5 CTCTTAT 7335 0.0 12.156782 37 CTAGTAC 215 4.020694E-8 12.046512 3 TCGTATA 155 2.7236314E-5 11.935484 2 CGTATTA 125 7.225567E-4 11.84 28 TATACCG 175 7.344761E-6 11.628571 5 GAGTGTC 1455 0.0 11.570446 7 ACCGTCC 385 0.0 11.532467 8 GTCGTAT 195 1.9635154E-6 11.384616 1 TCTATAC 440 0.0 11.352273 3 GTGTACG 245 2.0187144E-8 11.326531 1 TCGTTAC 595 0.0 11.193277 23 CTCGTTA 645 0.0 11.186047 22 >>END_MODULE