##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727141.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8198826 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00470201465429 33.0 31.0 34.0 30.0 34.0 2 32.230277359221915 34.0 31.0 34.0 30.0 34.0 3 32.34408279917149 34.0 31.0 34.0 30.0 34.0 4 35.95717240492724 37.0 35.0 37.0 35.0 37.0 5 35.66333509212173 37.0 35.0 37.0 33.0 37.0 6 35.675509274132665 37.0 35.0 37.0 33.0 37.0 7 35.643444439484384 37.0 35.0 37.0 33.0 37.0 8 35.607761037982755 37.0 35.0 37.0 33.0 37.0 9 37.431233569293944 39.0 37.0 39.0 34.0 39.0 10 37.25076419477618 39.0 37.0 39.0 34.0 39.0 11 37.33950690013424 39.0 37.0 39.0 34.0 39.0 12 37.246739106306194 39.0 37.0 39.0 34.0 39.0 13 37.31840558636078 39.0 37.0 39.0 34.0 39.0 14 38.51957121665956 40.0 38.0 41.0 34.0 41.0 15 38.47289099683296 40.0 38.0 41.0 34.0 41.0 16 38.432037342907385 40.0 38.0 41.0 34.0 41.0 17 38.38288225655722 40.0 38.0 41.0 34.0 41.0 18 38.38207604357014 40.0 38.0 41.0 34.0 41.0 19 38.43272475839834 40.0 38.0 41.0 34.0 41.0 20 38.351437510687504 40.0 38.0 41.0 34.0 41.0 21 38.29790143125369 40.0 38.0 41.0 34.0 41.0 22 38.24277439233373 40.0 38.0 41.0 34.0 41.0 23 38.184092332243665 40.0 38.0 41.0 34.0 41.0 24 38.10973717456621 40.0 37.0 41.0 33.0 41.0 25 38.07757025213122 40.0 37.0 41.0 33.0 41.0 26 37.929987415271405 40.0 37.0 41.0 33.0 41.0 27 37.806397891600575 40.0 37.0 41.0 33.0 41.0 28 37.733800912472105 40.0 37.0 41.0 33.0 41.0 29 37.64969813970927 40.0 37.0 41.0 32.0 41.0 30 37.61075329565477 40.0 37.0 41.0 32.0 41.0 31 37.57039361489072 39.0 37.0 41.0 32.0 41.0 32 37.474221431214666 39.0 37.0 41.0 32.0 41.0 33 37.41230110262128 39.0 37.0 41.0 32.0 41.0 34 37.38220923337073 39.0 36.0 41.0 32.0 41.0 35 37.31999630190957 39.0 36.0 41.0 31.0 41.0 36 37.21596274881306 39.0 36.0 41.0 31.0 41.0 37 37.14347651724771 39.0 36.0 41.0 31.0 41.0 38 37.115231863683896 39.0 36.0 41.0 31.0 41.0 39 37.02584406596749 39.0 36.0 40.0 31.0 41.0 40 36.957860796167644 39.0 36.0 40.0 31.0 41.0 41 36.91885606549035 39.0 36.0 40.0 31.0 41.0 42 36.80444309953645 39.0 36.0 40.0 30.0 41.0 43 35.524178095742 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 6.0 11 9.0 12 6.0 13 4.0 14 9.0 15 12.0 16 17.0 17 72.0 18 153.0 19 350.0 20 828.0 21 1733.0 22 3314.0 23 6397.0 24 10912.0 25 18168.0 26 28765.0 27 43563.0 28 63926.0 29 91055.0 30 125234.0 31 169215.0 32 223786.0 33 297461.0 34 399231.0 35 548849.0 36 783438.0 37 1205569.0 38 2138001.0 39 2038741.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.45267554159584 18.47166899260943 12.62897883184739 26.446676633947348 2 18.296924462112017 20.456697092974043 35.983737183835835 25.262641261078112 3 19.759231382639417 22.327245388547095 30.10173651691108 27.811786711902407 4 15.036933336553307 15.550397093437523 34.146644897696326 35.26602467231284 5 15.38450748924297 35.50646153485877 34.0048928956414 15.104138080256856 6 35.2555231688049 34.10899316560688 15.35417387806498 15.281309787523236 7 29.09436058284442 30.211483936846566 21.41296814934236 19.281187330966652 8 26.109421031742837 35.02179458376114 19.803737754649266 19.065046629846762 9 26.55435058629126 14.966435438439602 19.758548358021013 38.72066561724813 10 17.168604383115337 26.436321492857633 33.308024831847874 23.08704929217915 11 35.51679228221211 21.8671307331074 21.56670967282389 21.0493673118566 12 21.204621246993167 24.620207819997646 30.52116242008307 23.65400851292612 13 30.59194084616505 19.951783340688046 24.349425149405537 25.10685066374137 14 22.179480330476583 20.58134908583253 25.692434502208002 31.546736081482884 15 25.111790395356604 27.507755378635917 22.631825580881944 24.748628645125535 16 24.35512108684829 26.2051420532647 24.83146977384323 24.608267086043785 17 23.821288560093848 26.283470340753663 25.646684049643202 24.248557049509284 18 23.931121358106637 25.642805445560136 26.29721621119902 24.128856985134213 19 24.8849530408378 25.31468529762676 26.53710421467659 23.263257446858855 20 24.372855333190387 25.147380856722656 26.430857295910414 24.04890651417654 21 24.094839919764123 25.4786112060434 26.692736252726917 23.73381262146556 22 24.71885608988409 24.90290683080724 26.02206706179641 24.356170017512262 23 24.10889071191412 25.30152487685432 26.209398760261532 24.38018565097003 24 24.027598585456015 25.174189572994965 26.26763880584854 24.530573035700478 25 24.446682976318804 25.014654537125192 26.066561236938067 24.472101249617932 26 24.02267105070897 25.355044734453447 26.34755268620166 24.27473152863593 27 24.30573596756414 25.688336354497583 25.922979704655276 24.082947973283 28 24.09464476987315 25.612849937295902 25.87743659884964 24.415068693981308 29 23.97257851307004 25.81028064261883 26.36506738891641 23.852073455394713 30 24.4457438174685 25.473939805528257 25.968217888756268 24.112098488246975 31 24.22448043171059 25.04165840328847 26.40587810986597 24.327983055134965 32 23.778123843584435 25.539778499995 26.27865257782029 24.403445078600278 33 23.817263593592546 24.973721847493778 26.34560118729194 24.863413371621743 34 24.193183267945923 24.878342338281115 26.79606811999669 24.13240627377627 35 23.958783855151943 24.820870695389804 26.682259142955346 24.53808630650291 36 23.7222133998209 24.495653402084642 27.101148383927164 24.6809848141673 37 23.503291812754657 24.061359516594205 27.608464919245755 24.826883751405386 38 23.424743981638347 23.929084481119613 27.87943054286065 24.76674099438139 39 22.932624744079213 23.963552830612578 28.559857228339762 24.543965196968447 40 23.25751272194336 23.737800997362303 28.584726642570534 24.4199596381238 41 22.611737338979996 23.97695718874873 28.71868484585476 24.692620626416513 42 22.22085210736269 24.292356003164358 28.687534044508322 24.799257844964632 43 22.02199436846202 24.01063274180962 28.572212655811942 25.39516023391642 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4639.0 1 4172.0 2 3705.0 3 6331.0 4 8957.0 5 8957.0 6 10381.0 7 11805.0 8 10528.0 9 9251.0 10 13050.0 11 16849.0 12 16849.0 13 25967.5 14 35086.0 15 41979.0 16 48872.0 17 46452.5 18 44033.0 19 44033.0 20 52335.5 21 60638.0 22 57013.0 23 53388.0 24 64078.0 25 74768.0 26 74768.0 27 90369.0 28 105970.0 29 122464.5 30 138959.0 31 162651.0 32 186343.0 33 186343.0 34 215295.0 35 244247.0 36 277574.0 37 310901.0 38 348411.5 39 385922.0 40 385922.0 41 425280.0 42 464638.0 43 507987.0 44 551336.0 45 592849.5 46 634363.0 47 634363.0 48 671512.0 49 708661.0 50 727540.5 51 746420.0 52 733254.0 53 720088.0 54 720088.0 55 685111.0 56 650134.0 57 603682.5 58 557231.0 59 506889.0 60 456547.0 61 456547.0 62 399293.0 63 342039.0 64 289100.0 65 236161.0 66 194045.5 67 151930.0 68 151930.0 69 123672.0 70 95414.0 71 76324.0 72 57234.0 73 46610.5 74 35987.0 75 35987.0 76 28708.5 77 21430.0 78 17003.0 79 12576.0 80 9542.5 81 6509.0 82 6509.0 83 4878.0 84 3247.0 85 2408.5 86 1570.0 87 1115.0 88 660.0 89 660.0 90 438.5 91 217.0 92 140.0 93 63.0 94 45.0 95 27.0 96 27.0 97 18.0 98 9.0 99 5.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 8198826.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.626076309966315 #Duplication Level Percentage of deduplicated Percentage of total 1 78.12848495281827 40.334671261562505 2 10.904651777544695 11.259287696022644 3 3.844107406810917 5.953685469831814 4 1.9936300506107192 4.11693188506684 5 1.146146890117914 2.9585533405829 6 0.7338525728302548 2.273155735511991 7 0.5126128325413686 1.8524932447174076 8 0.39144797641525386 1.6167138481436631 9 0.32120592108941437 1.4924341254037612 >10 1.8370131818760391 17.7066932490824 >50 0.13565512850845093 4.806192761778266 >100 0.04993775954129393 4.125661090845346 >500 8.27935434057924E-4 0.26588551729400084 >1k 3.310330142704371E-4 0.3809956709455041 >5k 0.0 0.0 >10k+ 9.458084701772125E-5 0.8566451032109356 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 22842 0.2786008630991803 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 19864 0.24227858964198046 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 15846 0.1932715732715879 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11624 0.1417763957912999 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.659060455728662E-5 2 0.0 0.0 0.0 0.0 3.659060455728662E-5 3 0.0 0.0 0.0 0.0 3.659060455728662E-5 4 0.0 0.0 0.0 0.0 6.0984340928811025E-5 5 0.0 0.0 0.0 0.0 6.0984340928811025E-5 6 0.0 0.0 0.0 0.0 9.757494548609764E-5 7 1.2196868185762205E-5 0.0 0.0 0.0 1.2196868185762205E-4 8 1.2196868185762205E-5 0.0 0.0 1.2196868185762205E-5 1.3416555004338427E-4 9 1.2196868185762205E-5 0.0 0.0 1.2196868185762205E-5 1.7075615460067088E-4 10 2.439373637152441E-5 0.0 0.0 1.2196868185762205E-5 1.7075615460067088E-4 11 2.439373637152441E-5 0.0 0.0 1.2196868185762205E-5 1.8295302278643308E-4 12 2.439373637152441E-5 0.0 0.0 2.439373637152441E-5 1.9514989097219528E-4 13 2.439373637152441E-5 0.0 0.0 3.659060455728662E-5 1.9514989097219528E-4 14 2.439373637152441E-5 0.0 0.0 4.878747274304882E-5 2.317404955294819E-4 15 3.659060455728662E-5 0.0 0.0 8.537807730033544E-5 2.439373637152441E-4 16 4.878747274304882E-5 0.0 0.0 1.4636241822914647E-4 2.9272483645829294E-4 17 4.878747274304882E-5 0.0 0.0 1.7075615460067088E-4 2.9272483645829294E-4 18 6.0984340928811025E-5 0.0 0.0 1.7075615460067088E-4 3.1711857282981735E-4 19 6.0984340928811025E-5 0.0 0.0 2.561342319010063E-4 3.1711857282981735E-4 20 6.0984340928811025E-5 0.0 0.0 3.781029137586284E-4 3.1711857282981735E-4 21 6.0984340928811025E-5 0.0 0.0 5.122684638020126E-4 3.293154410155795E-4 22 6.0984340928811025E-5 0.0 0.0 8.537807730033544E-4 3.293154410155795E-4 23 6.0984340928811025E-5 0.0 0.0 0.0012806711595050315 5.000715956162504E-4 24 6.0984340928811025E-5 0.0 0.0 0.002305208087109057 5.122684638020126E-4 25 6.0984340928811025E-5 0.0 0.0 0.003963982160372716 5.122684638020126E-4 26 6.0984340928811025E-5 0.0 0.0 0.008110917343531867 5.366622001735371E-4 27 6.0984340928811025E-5 0.0 0.0 0.036529620216357805 5.366622001735371E-4 28 6.0984340928811025E-5 0.0 0.0 0.1069787308573203 5.366622001735371E-4 29 6.0984340928811025E-5 0.0 0.0 0.19973591341004188 5.366622001735371E-4 30 6.0984340928811025E-5 0.0 0.0 0.316313579529557 5.366622001735371E-4 31 6.0984340928811025E-5 0.0 0.0 0.6779629181055922 5.488590683592993E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7410 0.0 23.04386 1 CTTATAC 6740 0.0 16.359049 37 GTATCAA 10840 0.0 15.701107 2 TCTTATA 10955 0.0 14.3035145 37 CTCTTAT 16670 0.0 12.684764 37 TCGTTAC 1285 0.0 12.381323 23 TATCAAC 14755 0.0 11.785835 3 ATCAACG 14545 0.0 11.765212 4 CGTGCGA 270 5.802576E-10 11.648149 10 TCAACGC 14655 0.0 11.63903 5 CAACGCA 14825 0.0 11.480606 6 AACGCAG 14885 0.0 11.334901 7 TACGGAT 2005 0.0 11.256858 27 CTCGTTA 1450 0.0 11.227586 22 TTACGGA 2070 0.0 11.171497 26 GTTACGG 1675 0.0 11.044777 25 ACGGATG 2170 0.0 10.997695 28 TCTCTTA 23865 0.0 10.852714 37 GTCTTAG 1280 0.0 10.839845 1 GGGTAAG 3945 0.0 10.832699 1 >>END_MODULE